Crossref journal-article
Society for Neuroscience
The Journal of Neuroscience (393)
Abstract

Several single-span membrane proteins are cleaved within their transmembrane domains (TMDs) by intramembrane-cleaving proteases, although the structure of the active site executing intramembrane cleavage remains unknown. Here we use the substituted cysteine accessibility method to examine the structure of presenilin-1, a catalytic subunit of γ-secretase, involved in amyloid β protein generation in Alzheimer's disease and Notch signaling. We show that TMD6 and TMD7 of presenilin-1 contribute to the formation of a hydrophilic pore within the membrane. Residues at the luminal portion of TMD6 are predicted to form a subsite for substrate or inhibitor binding on the α-helix facing a hydrophilic milieu, whereas those around the GxGD catalytic motif within TMD7 are highly water accessible, suggesting formation of a hydrophilic structure within the pore. Collectively, our data suggest that the active site of γ-secretase resides in a catalytic pore filled with water within the lipid bilayer and is tapered around the catalytic aspartates.

Bibliography

Sato, C., Morohashi, Y., Tomita, T., & Iwatsubo, T. (2006). Structure of the Catalytic Pore of γ-Secretase Probed by the Accessibility of Substituted Cysteines. The Journal of Neuroscience, 26(46), 12081–12088.

Authors 4
  1. Chihiro Sato (first)
  2. Yuichi Morohashi (additional)
  3. Taisuke Tomita (additional)
  4. Takeshi Iwatsubo (additional)
References 43 Referenced 125
  1. 10.1016/S0021-9258(17)36544-4 / J Biol Chem / Amino acid residues lining the chloride channel of the cystic fibrosis transmembrane conductance regulator by Akabas (1994)
  2. 10.1074/jbc.M404832200
  3. 10.1021/ja037131v
  4. 10.1016/S0896-6273(00)80232-9
  5. 10.1038/35017062
  6. 10.1038/nrm1334
  7. 10.1016/S0962-8924(02)02394-2
  8. 10.1074/jbc.M405597200
  9. 10.1038/35017105
  10. 10.1038/87425 / Nat Neurosci / Protein mobility and GABA-induced conformational changes in GABA(A) receptor pore-lining M2 segment by Horenstein (2001)
  11. 10.1038/35085077
  12. 10.1039/b306970b / Chem Commun (Camb) / Solid-phase synthesis of photoaffinity probes. Highly efficient incorporation of biotin-tag and cross-linking groups by Kan (2003)
  13. 10.1006/meth.1998.0615
  14. 10.1073/pnas.0407640102
  15. 10.1016/S0896-6273(00)80165-8
  16. 10.1074/jbc.M507217200
  17. 10.1073/pnas.0602321103
  18. 10.1016/S0896-6273(00)80231-7
  19. 10.1073/pnas.95.12.7109
  20. 10.1038/35015085
  21. 10.1074/jbc.275.8.5253
  22. 10.1074/jbc.M103498200
  23. 10.1074/jbc.C100467200
  24. 10.1074/jbc.M513012200
  25. 10.1016/j.bbrc.2006.02.158
  26. 10.1006/nbdi.1997.0129
  27. 10.1021/bi00367a038
  28. 10.1073/pnas.1735338100
  29. 10.1016/S0896-6273(00)80666-2
  30. 10.1006/meth.1998.0587
  31. 10.1016/S0896-6273(00)81071-5
  32. 10.1126/science.168.3928.255
  33. 10.1038/nature01506
  34. 10.1074/jbc.M604997200
  35. 10.2174/138161206775474206
  36. 10.1073/pnas.94.5.2025
  37. 10.1523/JNEUROSCI.19-24-10627.1999 / J Neurosci / C terminus of presenilin is required for overproduction of amyloidogenic Aβ42 through stabilization and endoproteolysis of presenilin by Tomita (1999)
  38. 10.1038/nature02218
  39. 10.1074/jbc.M509066200
  40. 10.1016/S0896-6273(00)80506-1
  41. 10.1021/bi060799c
  42. 10.1523/JNEUROSCI.5354-05.2006
  43. 10.1074/jbc.274.31.21973
Dates
Type When
Created 18 years, 9 months ago (Nov. 15, 2006, 9:56 p.m.)
Deposited 2 years, 4 months ago (April 13, 2023, 1:44 p.m.)
Indexed 1 year ago (Aug. 5, 2024, 5:55 p.m.)
Issued 18 years, 9 months ago (Nov. 15, 2006)
Published 18 years, 9 months ago (Nov. 15, 2006)
Published Online 18 years, 9 months ago (Nov. 15, 2006)
Published Print 18 years, 9 months ago (Nov. 15, 2006)
Funders 0

None

@article{Sato_2006, title={Structure of the Catalytic Pore of γ-Secretase Probed by the Accessibility of Substituted Cysteines}, volume={26}, ISSN={1529-2401}, url={http://dx.doi.org/10.1523/jneurosci.3614-06.2006}, DOI={10.1523/jneurosci.3614-06.2006}, number={46}, journal={The Journal of Neuroscience}, publisher={Society for Neuroscience}, author={Sato, Chihiro and Morohashi, Yuichi and Tomita, Taisuke and Iwatsubo, Takeshi}, year={2006}, month=nov, pages={12081–12088} }