DOI: 10.1371/journal.ppat.1003992. Pernicious Pathogens or Expedient Elements of Inheritance: The Significance of Yeast Prions

Pernicious Pathogens or Expedient Elements of Inheritance: The Significance of Yeast Prions

10.1371/journal.ppat.1003992

Crossref journal-article

Public Library of Science (PLoS)

PLoS Pathogens (340)

Bibliography

Byers, J. S., & Jarosz, D. F. (2014). Pernicious Pathogens or Expedient Elements of Inheritance: The Significance of Yeast Prions. PLoS Pathogens, 10(4), e1003992.

Authors 2

James S. Byers (first)
Daniel F. Jarosz (additional)

References 34 Referenced 16

10.1146/annurev.neuro.24.1.519 / Ann Rev Neurosci / Prion diseases of humans and animals: Their causes and molecular basis by J Collinge (2001)
10.1534/genetics.111.137760 / Genetics / Prions in Yeast by SW Liebman (2012)
10.1038/35035005 / Nature / A yeast prion provides a mechanism for genetic variation and phenotypic diversity by HL True (2000)
10.1046/j.1365-2958.2000.01761.x / Mol Microbiol / Evolutionary conservation of prion-forming abilities of the yeast Sup35 protein by YO Chernoff (2000)
10.1016/S1097-2765(01)00259-3 / Mol Cell / Yeast [<italic>PSI</italic>+] “Prions” that Are Crosstransmissible and Susceptible beyond a Species Barrier through a Quasi-Prion State by T Nakayashiki (2001)
10.1534/genetics.109.110213 / Genetics / The Spontaneous Appearance Rate of the Yeast Prion [<italic>PSI</italic>+] and Its Implications for the Evolution of the Evolvability Properties of the [<italic>PSI</italic>+] System by AK Lancaster (2010)
10.1016/j.tpb.2007.08.006 / Theor Popul Biol / The evolution of bet-hedging adaptations to rare scenarios by OD King (2007)
10.1073/pnas.0504882102 / Proc Natl Acad Sci / Yeast prions [URE3] and [<italic>PSI</italic>+] are diseases by T Nakayashiki (2005)
10.1038/nature10875 / Nature / Prions are a common mechanism for phenotypic inheritance in wild yeasts by R Halfmann (2012)
10.1073/pnas.1213449109 / Proc Natl Acad Sci USA / Sex, prions, and plasmids in yeast by AC Kelly (2012)
10.4161/pri.24845 / Prion / Saccharomyces cerevisiae: A sexy yeast with a prion problem by AC Kelly (2013)
10.1073/pnas.0707314105 / Proc Natl Acad Sci USA / Population genomics of the wild yeast Saccharomyces paradoxus: Quantifying the life cycle by IJ Tsai (2008)
10.1038/ng1859 / Nat Genet / Population genomic analysis of outcrossing and recombination in yeast by DM Ruderfer (2006)
10.1016/j.ymeth.2006.04.010 / Methods / Biochemical and genetic methods for characterization of [<italic>PIN</italic>+] prions in yeast by SW Liebman (2006)
10.1016/j.cell.2013.02.026 / Cell / Heritable Remodeling of Yeast Multicellularity by an Environmentally Responsive Prion by DL Holmes (2013)
10.1038/nature02885 / Nature / Epigenetic regulation of translation reveals hidden genetic variation to produce complex traits by HL True (2004)
10.1073/pnas.1102762108 / Proc Natl Acad Sci USA / Suicidal [<italic>PSI</italic>+] is a lethal yeast prion by RP McGlinchey (2011)
Watson JD, Baker TA, Bell SP, Gann A, Levine M, <etal>et al</etal>.. (2013) Molecular Biology of the Gene. San Francisco: Pearson/Benjamin Cummings.
{'key': 'ref19', 'first-page': '585', 'article-title': 'The physical basis of how prion conformations determine strain phenotypes', 'volume': '442', 'author': 'M Tanaka', 'year': '2006', 'journal-title': 'Nat Cell Biol'} / Nat Cell Biol / The physical basis of how prion conformations determine strain phenotypes by M Tanaka (2006)
10.1073/pnas.94.18.9773 / Proc Natl Acad Sci USA / The protein product of the het-s heterokaryon incompatibility gene of the fungus <italic>Podospora anserina</italic> behaves as a prion analog by V Coustou (1997)
10.1038/nrmicro1708 / Nat Rev Microbiol / Prions of fungi: Inherited structures and biological roles by RB Wickner (2007)
10.1016/j.tcb.2009.12.003 / Trends Cell Biol / Prions, protein homeostasis, and phenotypic diversity by R Halfmann (2010)
10.1371/journal.pbio.0060294 / PLOS Biol / Prion Switching in Response to Environmental Stress by J Tyedmers (2008)
10.1126/science.1219491 / Science / A Yeast Prion, Mod5, Promotes Acquired Drug Resistance and Cell Survival Under Environmental Stress by G Suzuki (2012)
10.1126/science.1191081 / Science / Epigenetics in the Extreme: Prions and the Inheritance of Environmentally Acquired Traits by R Halfmann (2010)
10.1086/302219 / Am J Hum Genet / When less is more: Gene loss as an engine of evolutionary change by MV Olson (1999)
10.1128/mBio.00036-12 / mBio / The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss by JJ Morris (2012)
10.1371/journal.pbio.1001451 / PLOS Biol / The Mechanism of Toxicity in HET-S/HET-s Prion Incompatibility by C Seuring (2012)
10.1101/gad.1839109 / Genes Dev / A heritable switch in carbon source utilization driven by an unusual yeast prion by JCS Brown (2009)
10.1016/j.cell.2012.01.004 / Cell / Critical Role of Amyloid-like Oligomers of <italic>Drosophila</italic> Orb2 in the Persistence of Memory by A Majumdar (2012)
10.1016/S1369-5274(99)00005-3 / Curr Opin Microbiol / The biological cost of antibiotic resistance by DI Andersson (1999)
10.1111/j.1558-5646.2009.00729.x / Evolution (NY) / The evolution of reversible switches in the presence of irreversible mimics by AK Lancaster (2009)
10.1016/j.tcb.2013.01.007 / Trends Cell Biol / Blessings in disguise: Biological benefits of prion-like mechanisms by GA Newby (2013)
10.1136/bmj.1.4857.290 / Br Med J / Protection afforded by sickle-cell trait against subtertian malarial infection by AC Allison (1954)

Dates

Type	When
Created	11 years, 4 months ago (April 10, 2014, 4:53 p.m.)
Deposited	6 years, 10 months ago (Oct. 23, 2018, 8:26 a.m.)
Indexed	1 year ago (Aug. 4, 2024, 7:36 p.m.)
Issued	11 years, 4 months ago (April 10, 2014)
Published	11 years, 4 months ago (April 10, 2014)
Published Online	11 years, 4 months ago (April 10, 2014)

Funders 0

None

BibTeX

@article{Byers_2014, title={Pernicious Pathogens or Expedient Elements of Inheritance: The Significance of Yeast Prions}, volume={10}, ISSN={1553-7374}, url={http://dx.doi.org/10.1371/journal.ppat.1003992}, DOI={10.1371/journal.ppat.1003992}, number={4}, journal={PLoS Pathogens}, publisher={Public Library of Science (PLoS)}, author={Byers, James S. and Jarosz, Daniel F.}, editor={True, Heather L.}, year={2014}, month=apr, pages={e1003992} }

JSON

{
  "indexed": {
    "date-parts": [
      [
        2024,
        8,
        4
      ]
    ],
    "date-time": "2024-08-04T23:36:30Z",
    "timestamp": 1722814590313
  },
  "reference-count": 34,
  "publisher": "Public Library of Science (PLoS)",
  "issue": "4",
  "license": [
    {
      "start": {
        "date-parts": [
          [
            2014,
            4,
            10
          ]
        ],
        "date-time": "2014-04-10T00:00:00Z",
        "timestamp": 1397088000000
      },
      "content-version": "unspecified",
      "delay-in-days": 0,
      "URL": "http://creativecommons.org/licenses/by/4.0/"
    }
  ],
  "content-domain": {
    "domain": [
      "www.plospathogens.org"
    ],
    "crossmark-restriction": false
  },
  "DOI": "10.1371/journal.ppat.1003992",
  "type": "journal-article",
  "created": {
    "date-parts": [
      [
        2014,
        4,
        10
      ]
    ],
    "date-time": "2014-04-10T20:53:34Z",
    "timestamp": 1397163214000
  },
  "page": "e1003992",
  "update-policy": "http://dx.doi.org/10.1371/journal.ppat.corrections_policy",
  "source": "Crossref",
  "is-referenced-by-count": 16,
  "title": "Pernicious Pathogens or Expedient Elements of Inheritance: The Significance of Yeast Prions",
  "prefix": "10.1371",
  "volume": "10",
  "author": [
    {
      "given": "James S.",
      "family": "Byers",
      "sequence": "first",
      "affiliation": []
    },
    {
      "given": "Daniel F.",
      "family": "Jarosz",
      "sequence": "additional",
      "affiliation": []
    }
  ],
  "member": "340",
  "published-online": {
    "date-parts": [
      [
        2014,
        4,
        10
      ]
    ]
  },
  "reference": [
    {
      "key": "ref1",
      "doi-asserted-by": "crossref",
      "first-page": "519",
      "DOI": "10.1146/annurev.neuro.24.1.519",
      "article-title": "Prion diseases of humans and animals: Their causes and molecular basis",
      "volume": "24",
      "author": "J Collinge",
      "year": "2001",
      "journal-title": "Ann Rev Neurosci"
    },
    {
      "key": "ref2",
      "doi-asserted-by": "crossref",
      "first-page": "1041",
      "DOI": "10.1534/genetics.111.137760",
      "article-title": "Prions in Yeast",
      "volume": "191",
      "author": "SW Liebman",
      "year": "2012",
      "journal-title": "Genetics"
    },
    {
      "key": "ref3",
      "doi-asserted-by": "crossref",
      "first-page": "477",
      "DOI": "10.1038/35035005",
      "article-title": "A yeast prion provides a mechanism for genetic variation and phenotypic diversity",
      "volume": "407",
      "author": "HL True",
      "year": "2000",
      "journal-title": "Nature"
    },
    {
      "key": "ref4",
      "doi-asserted-by": "crossref",
      "first-page": "865",
      "DOI": "10.1046/j.1365-2958.2000.01761.x",
      "article-title": "Evolutionary conservation of prion-forming abilities of the yeast Sup35 protein",
      "volume": "35",
      "author": "YO Chernoff",
      "year": "2000",
      "journal-title": "Mol Microbiol"
    },
    {
      "key": "ref5",
      "doi-asserted-by": "crossref",
      "first-page": "1121",
      "DOI": "10.1016/S1097-2765(01)00259-3",
      "article-title": "Yeast [<italic>PSI</italic><sup>+</sup>] \u201cPrions\u201d that Are Crosstransmissible and Susceptible beyond a Species Barrier through a Quasi-Prion State",
      "volume": "7",
      "author": "T Nakayashiki",
      "year": "2001",
      "journal-title": "Mol Cell"
    },
    {
      "key": "ref6",
      "doi-asserted-by": "crossref",
      "first-page": "393",
      "DOI": "10.1534/genetics.109.110213",
      "article-title": "The Spontaneous Appearance Rate of the Yeast Prion [<italic>PSI</italic><sup>+</sup>] and Its Implications for the Evolution of the Evolvability Properties of the [<italic>PSI</italic><sup>+</sup>] System",
      "volume": "184",
      "author": "AK Lancaster",
      "year": "2010",
      "journal-title": "Genetics"
    },
    {
      "key": "ref7",
      "doi-asserted-by": "crossref",
      "first-page": "560",
      "DOI": "10.1016/j.tpb.2007.08.006",
      "article-title": "The evolution of bet-hedging adaptations to rare scenarios",
      "volume": "72",
      "author": "OD King",
      "year": "2007",
      "journal-title": "Theor Popul Biol"
    },
    {
      "key": "ref8",
      "doi-asserted-by": "crossref",
      "first-page": "10575",
      "DOI": "10.1073/pnas.0504882102",
      "article-title": "Yeast prions [URE3] and [<italic>PSI</italic><sup>+</sup>] are diseases",
      "volume": "102",
      "author": "T Nakayashiki",
      "year": "2005",
      "journal-title": "Proc Natl Acad Sci"
    },
    {
      "key": "ref9",
      "doi-asserted-by": "crossref",
      "first-page": "363",
      "DOI": "10.1038/nature10875",
      "article-title": "Prions are a common mechanism for phenotypic inheritance in wild yeasts",
      "volume": "482",
      "author": "R Halfmann",
      "year": "2012",
      "journal-title": "Nature"
    },
    {
      "key": "ref10",
      "doi-asserted-by": "crossref",
      "first-page": "2683",
      "DOI": "10.1073/pnas.1213449109",
      "article-title": "Sex, prions, and plasmids in yeast",
      "volume": "109",
      "author": "AC Kelly",
      "year": "2012",
      "journal-title": "Proc Natl Acad Sci USA"
    },
    {
      "key": "ref11",
      "doi-asserted-by": "crossref",
      "first-page": "215",
      "DOI": "10.4161/pri.24845",
      "article-title": "Saccharomyces cerevisiae: A sexy yeast with a prion problem",
      "volume": "7",
      "author": "AC Kelly",
      "year": "2013",
      "journal-title": "Prion"
    },
    {
      "key": "ref12",
      "doi-asserted-by": "crossref",
      "first-page": "4957",
      "DOI": "10.1073/pnas.0707314105",
      "article-title": "Population genomics of the wild yeast Saccharomyces paradoxus: Quantifying the life cycle",
      "volume": "105",
      "author": "IJ Tsai",
      "year": "2008",
      "journal-title": "Proc Natl Acad Sci USA"
    },
    {
      "key": "ref13",
      "doi-asserted-by": "crossref",
      "first-page": "1077",
      "DOI": "10.1038/ng1859",
      "article-title": "Population genomic analysis of outcrossing and recombination in yeast",
      "volume": "38",
      "author": "DM Ruderfer",
      "year": "2006",
      "journal-title": "Nat Genet"
    },
    {
      "key": "ref14",
      "doi-asserted-by": "crossref",
      "first-page": "23",
      "DOI": "10.1016/j.ymeth.2006.04.010",
      "article-title": "Biochemical and genetic methods for characterization of [<italic>PIN</italic><sup>+</sup>] prions in yeast",
      "volume": "39",
      "author": "SW Liebman",
      "year": "2006",
      "journal-title": "Methods"
    },
    {
      "key": "ref15",
      "doi-asserted-by": "crossref",
      "first-page": "153",
      "DOI": "10.1016/j.cell.2013.02.026",
      "article-title": "Heritable Remodeling of Yeast Multicellularity by an Environmentally Responsive Prion",
      "volume": "153",
      "author": "DL Holmes",
      "year": "2013",
      "journal-title": "Cell"
    },
    {
      "key": "ref16",
      "doi-asserted-by": "crossref",
      "first-page": "184",
      "DOI": "10.1038/nature02885",
      "article-title": "Epigenetic regulation of translation reveals hidden genetic variation to produce complex traits",
      "volume": "431",
      "author": "HL True",
      "year": "2004",
      "journal-title": "Nature"
    },
    {
      "key": "ref17",
      "doi-asserted-by": "crossref",
      "first-page": "5337",
      "DOI": "10.1073/pnas.1102762108",
      "article-title": "Suicidal [<italic>PSI</italic><sup>+</sup>] is a lethal yeast prion",
      "volume": "108",
      "author": "RP McGlinchey",
      "year": "2011",
      "journal-title": "Proc Natl Acad Sci USA"
    },
    {
      "key": "ref18",
      "unstructured": "Watson JD, Baker TA, Bell SP, Gann A, Levine M, <etal>et al</etal>.. (2013) Molecular Biology of the Gene. San Francisco: Pearson/Benjamin Cummings."
    },
    {
      "key": "ref19",
      "first-page": "585",
      "article-title": "The physical basis of how prion conformations determine strain phenotypes",
      "volume": "442",
      "author": "M Tanaka",
      "year": "2006",
      "journal-title": "Nat Cell Biol"
    },
    {
      "key": "ref20",
      "doi-asserted-by": "crossref",
      "first-page": "9773",
      "DOI": "10.1073/pnas.94.18.9773",
      "article-title": "The protein product of the het-s heterokaryon incompatibility gene of the fungus <italic>Podospora anserina</italic> behaves as a prion analog",
      "volume": "94",
      "author": "V Coustou",
      "year": "1997",
      "journal-title": "Proc Natl Acad Sci USA"
    },
    {
      "key": "ref21",
      "doi-asserted-by": "crossref",
      "first-page": "611",
      "DOI": "10.1038/nrmicro1708",
      "article-title": "Prions of fungi: Inherited structures and biological roles",
      "volume": "5",
      "author": "RB Wickner",
      "year": "2007",
      "journal-title": "Nat Rev Microbiol"
    },
    {
      "key": "ref22",
      "doi-asserted-by": "crossref",
      "first-page": "125",
      "DOI": "10.1016/j.tcb.2009.12.003",
      "article-title": "Prions, protein homeostasis, and phenotypic diversity",
      "volume": "20",
      "author": "R Halfmann",
      "year": "2010",
      "journal-title": "Trends Cell Biol"
    },
    {
      "key": "ref23",
      "doi-asserted-by": "crossref",
      "first-page": "e294",
      "DOI": "10.1371/journal.pbio.0060294",
      "article-title": "Prion Switching in Response to Environmental Stress",
      "volume": "6",
      "author": "J Tyedmers",
      "year": "2008",
      "journal-title": "PLOS Biol"
    },
    {
      "key": "ref24",
      "doi-asserted-by": "crossref",
      "first-page": "355",
      "DOI": "10.1126/science.1219491",
      "article-title": "A Yeast Prion, Mod5, Promotes Acquired Drug Resistance and Cell Survival Under Environmental Stress",
      "volume": "336",
      "author": "G Suzuki",
      "year": "2012",
      "journal-title": "Science"
    },
    {
      "key": "ref25",
      "doi-asserted-by": "crossref",
      "first-page": "629",
      "DOI": "10.1126/science.1191081",
      "article-title": "Epigenetics in the Extreme: Prions and the Inheritance of Environmentally Acquired Traits",
      "volume": "330",
      "author": "R Halfmann",
      "year": "2010",
      "journal-title": "Science"
    },
    {
      "key": "ref26",
      "doi-asserted-by": "crossref",
      "first-page": "18",
      "DOI": "10.1086/302219",
      "article-title": "When less is more: Gene loss as an engine of evolutionary change",
      "volume": "64",
      "author": "MV Olson",
      "year": "1999",
      "journal-title": "Am J Hum Genet"
    },
    {
      "key": "ref27",
      "doi-asserted-by": "crossref",
      "first-page": "e00036",
      "DOI": "10.1128/mBio.00036-12",
      "article-title": "The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss",
      "volume": "3",
      "author": "JJ Morris",
      "year": "2012",
      "journal-title": "mBio"
    },
    {
      "key": "ref28",
      "doi-asserted-by": "crossref",
      "first-page": "e1001451",
      "DOI": "10.1371/journal.pbio.1001451",
      "article-title": "The Mechanism of Toxicity in HET-S/HET-s Prion Incompatibility",
      "volume": "10",
      "author": "C Seuring",
      "year": "2012",
      "journal-title": "PLOS Biol"
    },
    {
      "key": "ref29",
      "doi-asserted-by": "crossref",
      "first-page": "2320",
      "DOI": "10.1101/gad.1839109",
      "article-title": "A heritable switch in carbon source utilization driven by an unusual yeast prion",
      "volume": "23",
      "author": "JCS Brown",
      "year": "2009",
      "journal-title": "Genes Dev"
    },
    {
      "key": "ref30",
      "doi-asserted-by": "crossref",
      "first-page": "515",
      "DOI": "10.1016/j.cell.2012.01.004",
      "article-title": "Critical Role of Amyloid-like Oligomers of <italic>Drosophila</italic> Orb2 in the Persistence of Memory",
      "volume": "148",
      "author": "A Majumdar",
      "year": "2012",
      "journal-title": "Cell"
    },
    {
      "key": "ref31",
      "doi-asserted-by": "crossref",
      "first-page": "489",
      "DOI": "10.1016/S1369-5274(99)00005-3",
      "article-title": "The biological cost of antibiotic resistance",
      "volume": "2",
      "author": "DI Andersson",
      "year": "1999",
      "journal-title": "Curr Opin Microbiol"
    },
    {
      "key": "ref32",
      "doi-asserted-by": "crossref",
      "first-page": "2350",
      "DOI": "10.1111/j.1558-5646.2009.00729.x",
      "article-title": "The evolution of reversible switches in the presence of irreversible mimics",
      "volume": "63",
      "author": "AK Lancaster",
      "year": "2009",
      "journal-title": "Evolution (NY)"
    },
    {
      "key": "ref33",
      "doi-asserted-by": "crossref",
      "first-page": "251",
      "DOI": "10.1016/j.tcb.2013.01.007",
      "article-title": "Blessings in disguise: Biological benefits of prion-like mechanisms",
      "volume": "23",
      "author": "GA Newby",
      "year": "2013",
      "journal-title": "Trends Cell Biol"
    },
    {
      "key": "ref34",
      "doi-asserted-by": "crossref",
      "first-page": "290",
      "DOI": "10.1136/bmj.1.4857.290",
      "article-title": "Protection afforded by sickle-cell trait against subtertian malarial infection",
      "volume": "1",
      "author": "AC Allison",
      "year": "1954",
      "journal-title": "Br Med J"
    }
  ],
  "container-title": "PLoS Pathogens",
  "original-title": [],
  "language": "en",
  "link": [
    {
      "URL": "http://dx.plos.org/10.1371/journal.ppat.1003992",
      "content-type": "unspecified",
      "content-version": "vor",
      "intended-application": "similarity-checking"
    }
  ],
  "deposited": {
    "date-parts": [
      [
        2018,
        10,
        23
      ]
    ],
    "date-time": "2018-10-23T12:26:03Z",
    "timestamp": 1540297563000
  },
  "score": 1,
  "resource": {
    "primary": {
      "URL": "https://dx.plos.org/10.1371/journal.ppat.1003992"
    }
  },
  "subtitle": [],
  "editor": [
    {
      "given": "Heather L.",
      "family": "True",
      "sequence": "first",
      "affiliation": []
    }
  ],
  "short-title": [],
  "issued": {
    "date-parts": [
      [
        2014,
        4,
        10
      ]
    ]
  },
  "references-count": 34,
  "journal-issue": {
    "issue": "4",
    "published-online": {
      "date-parts": [
        [
          2014,
          4,
          10
        ]
      ]
    }
  },
  "URL": "http://dx.doi.org/10.1371/journal.ppat.1003992",
  "relation": {},
  "ISSN": [
    "1553-7374"
  ],
  "subject": [],
  "container-title-short": "PLoS Pathog",
  "published": {
    "date-parts": [
      [
        2014,
        4,
        10
      ]
    ]
  }
}