DOI: 10.1371/journal.pone.0142949. Correction of a Depth-Dependent Lateral Distortion in 3D Super-Resolution Imaging

Correction of a Depth-Dependent Lateral Distortion in 3D Super-Resolution Imaging

10.1371/journal.pone.0142949

Crossref journal-article

Public Library of Science (PLoS)

PLOS ONE (340)

Bibliography

Carlini, L., Holden, S. J., Douglass, K. M., & Manley, S. (2015). Correction of a Depth-Dependent Lateral Distortion in 3D Super-Resolution Imaging. PLOS ONE, 10(11), e0142949.

Authors 4

Lina Carlini (first)
Seamus J. Holden (additional)
Kyle M. Douglass (additional)
Suliana Manley (additional)

References 30 Referenced 27

10.1038/nmeth929 / Nat Methods / Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM) by MJ Rust (2006)
10.1126/science.1127344 / Science / Imaging intracellular fluorescent proteins at nanometer resolution by E Betzig (2006)
10.1002/cphc.201300711 / Chemphyschem / The Lateral and Axial Localization Uncertainty in Super-Resolution Light Microscopy by B Rieger (2014)
10.1063/1.2437066 / Appl Phys Lett / Nanometric three-dimensional tracking of individual quantum dots in cells by L Holtzer (2007)
10.1126/science.1153529 / Science / Three-dimensional super-resolution imaging by stochastic optical reconstruction microscopy by B Huang (2008)
10.1038/nmeth.1274 / Nat Methods / Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution by B Huang (2008)
10.1364/OL.39.000275 / Optics letters / Correction of depth-dependent aberrations in 3D single-molecule localization and super-resolution microscopy by R McGorty (2014)
10.1364/OE.16.022048 / Optics express / Three dimensional tracking of fluorescent microparticles using a photon-limited double-helix response system by SRP Pavani (2008)
10.1073/pnas.1114444108 / Proceedings of the National Academy of Sciences of the United States of America / Three-dimensional superresolution colocalization of intracellular protein superstructures and the cell surface in live Caulobacter crescentus by MD Lew (2011)
10.1021/nl304071h / Nano Lett / Quantitative Multicolor Subdiffraction Imaging of Bacterial Protein Ultrastructures in Three Dimensions by A Gahlmann (2013)
10.1073/pnas.1216687109 / Proceedings of the National Academy of Sciences of the United States of America / Simultaneous, accurate measurement of the 3D position and orientation of single molecules by MP Backlund (2012)
10.1364/OE.21.029462 / Optics express / Three dimensional single molecule localization using a phase retrieved pupil function by S Liu (2013)
10.1002/cphc.201100686 / Chemphyschem / Three-dimensional super-resolution imaging of the midplane protein FtsZ in live Caulobacter crescentus cells using astigmatism by JS Biteen (2012)
10.1073/pnas.1313368111 / Proceedings of the National Academy of Sciences of the United States of America / High throughput 3D super-resolution microscopy reveals Caulobacter crescentus in vivo Z-ring organization by SJ Holden (2014)
10.1038/nmeth.2224 / Nat Methods / rapidSTORM: accurate, fast open-source software for localization microscopy by S Wolter (2012)
10.1111/j.0022-2720.2004.01393.x / Journal of microscopy / Phase-retrieved pupil functions in wide-field fluorescence microscopy by BM Hanser (2004)
ZernikeCalc [Internet]. 2013 [cited September 3, 2015]. Available from: <ext-link xmlns:xlink="http://www.w3.org/1999/xlink" ext-link-type="uri" xlink:href="http://ch.mathworks.com/matlabcentral/fileexchange/28652-zernike-calculator" xlink:type="simple">http://ch.mathworks.com/matlabcentral/fileexchange/28652-zernike-calculator</ext-link>.
10.1364/OE.14.008111 / Optics express / Polarization effect on position accuracy of fluorophore localization by J Enderlein (2006)
10.1038/nmeth.1447 / Nat Methods / Optimized localization analysis for single-molecule tracking and super-resolution microscopy by K Mortensen (2010)
10.1021/nl103472b / Nano letters / Molecular Orientation Affects Localization Accuracy in Superresolution Far-Field Fluorescence Microscopy by J Engelhardt (2011)
10.1364/OE.18.024461 / Optics express / Accuracy of the gaussian point spread function model in 2D localization microscopy by S Stallinga (2010)
10.1111/j.0022-2720.2004.01383.x / Journal of microscopy / A common aberration with water-immersion objective lenses by R Arimoto (2004)
10.1364/JOSA.66.000207 / J Opt Soc Am / Zernike Polynomials and Atmospheric-Turbulence by RJ Noll (1976)
10.1017/S1431927611011913 / Microsc Microanal / The Three-Dimensional Point Spread Function of Aberration-Corrected Scanning Transmission Electron Microscopy by AR Lupini (2011)
10.1051/0004-6361/201219739 / Astron Astrophys / Interpolating point spread function anisotropy by M Gentile (2013)
10.1038/sj.emboj.7601895 / The EMBO journal / The structure of FtsZ filaments in vivo suggests a force-generating role in cell division by Z Li (2007)
10.1021/acs.analchem.5b01848 / Analytical chemistry / Objective-Induced Point Spread Function Aberrations and Their Impact on Super-Resolution Microscopy by KL Blythe (2015)
10.1364/OPTICA.2.000177 / Optica / Adaptive optics correction of specimen-induced aberrations in single-molecule switching microscopy by D Burke (2015)
10.1364/OE.23.013677 / Optics express / Adaptive optics stochastic optical reconstruction microscopy (AO-STORM) using a genetic algorithm by KF Tehrani (2015)
10.1073/pnas.1121558109 / Proceedings of the National Academy of Sciences of the United States of America / Correlative 3D superresolution fluorescence and electron microscopy reveal the relationship of mitochondrial nucleoids to membranes by BG Kopek (2012)

Dates

Type	When
Created	9 years, 9 months ago (Nov. 24, 2015, 4:29 p.m.)
Deposited	5 years, 3 months ago (May 9, 2020, 12:20 p.m.)
Indexed	3 months, 1 week ago (May 16, 2025, 2:06 a.m.)
Issued	9 years, 9 months ago (Nov. 23, 2015)
Published	9 years, 9 months ago (Nov. 23, 2015)
Published Online	9 years, 9 months ago (Nov. 23, 2015)

Funders 0

None

BibTeX

@article{Carlini_2015, title={Correction of a Depth-Dependent Lateral Distortion in 3D Super-Resolution Imaging}, volume={10}, ISSN={1932-6203}, url={http://dx.doi.org/10.1371/journal.pone.0142949}, DOI={10.1371/journal.pone.0142949}, number={11}, journal={PLOS ONE}, publisher={Public Library of Science (PLoS)}, author={Carlini, Lina and Holden, Seamus J. and Douglass, Kyle M. and Manley, Suliana}, editor={Muñoz-Barrutia, Arrate}, year={2015}, month=nov, pages={e0142949} }

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