DOI: 10.1186/1471-2164-4-19. Development and validation of a T7 based linear amplification for genomic DNA

Development and validation of a T7 based linear amplification for genomic DNA

10.1186/1471-2164-4-19

Crossref journal-article

Springer Science and Business Media LLC

BMC Genomics (297)

Bibliography

Liu, C. L., Schreiber, S. L., & Bernstein, B. E. (2003). Development and validation of a T7 based linear amplification for genomic DNA. BMC Genomics, 4(1).

Authors 3

Chih Long Liu (first)
Stuart L Schreiber (additional)
Bradley E Bernstein (additional)

References 23 Referenced 91

DeRisi JL, Iyer VR, Brown PO: Exploring the metabolic and genetic control of gene expression on a genomic scale. Science. 1997, 278: 680-6. 10.1126/science.278.5338.680. (10.1126/science.278.5338.680) / Science by JL DeRisi (1997)
Wodicka L, Dong H, Mittmann M, Ho MH, Lockhart DJ: Genome-wide expression monitoring in Saccharomyces cerevisiae. Nat Biotechnol. 1997, 15: 1359-67. (10.1038/nbt1297-1359) / Nat Biotechnol by L Wodicka (1997)
Ramaswamy S, Golub TR: DNA microarrays in clinical oncology. J Clin Oncol. 2002, 20: 1932-41. (10.1200/JCO.2002.20.7.1932) / J Clin Oncol by S Ramaswamy (2002)
Ren B, Robert F, Wyrick JJ, Aparicio O, Jennings EG, Simon I, Zeitlinger J, Schreiber J, Hannett N, Kanin E: Genome-wide location and function of DNA binding proteins. Science. 2000, 290: 2306-9. 10.1126/science.290.5500.2306. (10.1126/science.290.5500.2306) / Science by B Ren (2000)
Iyer VR, Horak CE, Scafe CS, Botstein D, Snyder M, Brown PO: Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF. Nature. 2001, 409: 533-8. 10.1038/35054095. (10.1038/35054095) / Nature by VR Iyer (2001)
Bernstein BE, Humphrey EL, Erlich RL, Schneider R, Bouman P, Liu JS, Kouzarides T, Schreiber SL: Methylation of histone H3 Lys 4 in coding regions of active genes. Proc Natl Acad Sci U S A. 2002, 99: 8695-700. 10.1073/pnas.112318199. (10.1073/pnas.082249499) / Proc Natl Acad Sci U S A by BE Bernstein (2002)
Robyr D, Suka Y, Xenarios I, Kurdistani SK, Wang A, Suka N, Grunstein M: Microarray deacetylation maps determine genome-wide functions for yeast histone deacetylases. Cell. 2002, 109: 437-46. (10.1016/S0092-8674(02)00746-8) / Cell by D Robyr (2002)
Bohlander SK, Espinosa R, Le Beau MM, Rowley JD, Diaz MO: A method for the rapid sequence-independent amplification of microdissected chromosomal material. Genomics. 1992, 13: 1322-4. (10.1016/0888-7543(92)90057-Y) / Genomics by SK Bohlander (1992)
Gerton JL, DeRisi J, Shroff R, Lichten M, Brown PO, Petes TD: Inaugural article: global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae. Proc Natl Acad Sci U S A. 2000, 97: 11383-90. 10.1073/pnas.97.21.11383. (10.1073/pnas.97.21.11383) / Proc Natl Acad Sci U S A by JL Gerton (2000)
Lee TI, Rinaldi NJ, Robert F, Odom DT, Bar-Joseph Z, Gerber GK, Hannett NM, Harbison CT, Thompson CM, Simon I: Transcriptional regulatory networks in Saccharomyces cerevisiae. Science. 2002, 298: 799-804. 10.1126/science.1075090. (10.1126/science.1075090) / Science by TI Lee (2002)
Ren B, Cam H, Takahashi Y, Volkert T, Terragni J, Young RA, Dynlacht BD: E2F integrates cell cycle progression with DNA repair, replication, and G(2)/M checkpoints. Genes Dev. 2002, 16: 245-56. 10.1101/gad.949802. (10.1101/gad.949802) / Genes Dev by B Ren (2002)
Lieb JD, Liu X, Botstein D, Brown PO: Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association. Nat Genet. 2001, 28: 327-34. 10.1038/ng569. (10.1038/ng569) / Nat Genet by JD Lieb (2001)
Horak CE, Mahajan MC, Luscombe NM, Gerstein M, Weissman SM, Snyder M: GATA-1 binding sites mapped in the beta-globin locus by using mammalian chIp-chip analysis. Proc Natl Acad Sci U S A. 2002, 99: 2924-9. 10.1073/pnas.052706999. (10.1073/pnas.052706999) / Proc Natl Acad Sci U S A by CE Horak (2002)
Phillips J, Eberwine JH: Antisense RNA Amplification: A Linear Amplification Method for Analyzing the mRNA Population from Single Living Cells. Methods. 1996, 10: 283-8. 10.1006/meth.1996.0104. (10.1006/meth.1996.0104) / Methods by J Phillips (1996)
Wang E, Miller LD, Ohnmacht GA, Liu ET, Marincola FM: High-fidelity mRNA amplification for gene profiling. Nat Biotechnol. 2000, 18: 457-9. 10.1038/74546. (10.1038/74546) / Nat Biotechnol by E Wang (2000)
Baugh LR, Hill AA, Brown EL, Hunter CP: Quantitative analysis of mRNA amplification by in vitro transcription. Nucleic Acids Res. 2001, 29: E29-10.1093/nar/29.5.e29. (10.1093/nar/29.5.e29) / Nucleic Acids Res by LR Baugh (2001)
Zhao H, Hastie T, Whitfield ML, Borresen-Dale AL, Jeffrey SS: Optimization and evaluation of T7 based RNA linear amplification protocols for cDNA microarray analysis. BMC Genomics. 2002, 3: 31-10.1186/1471-2164-3-31. (10.1186/1471-2164-3-31) / BMC Genomics by H Zhao (2002)
Iscove NN, Barbara M, Gu M, Gibson M, Modi C, Winegarden N: Representation is faithfully preserved in global cDNA amplified exponentially from sub-picogram quantities of mRNA. Nat Biotechnol. 2002, 20: 940-3. 10.1038/nbt729. (10.1038/nbt729) / Nat Biotechnol by NN Iscove (2002)
Shaw CA: Theoretical consideration of amplification strategies. Neurochem Res. 2002, 27: 1123-31. 10.1023/A:1020917223962. (10.1023/A:1020917223962) / Neurochem Res by CA Shaw (2002)
Eisen MB, Spellman PT, Brown PO, Botstein D: Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci U S A. 1998, 95: 14863-8. 10.1073/pnas.95.25.14863. (10.1073/pnas.95.25.14863) / Proc Natl Acad Sci U S A by MB Eisen (1998)
Snijders AM, Nowak N, Segraves R, Blackwood S, Brown N, Conroy J, Hamilton G, Hindle AK, Huey B, Kimura K, Law S, Myambo K, Palmer J, Ylstra B, Yue JP, Gray JW, Jain AN, Pinkel D, Albertson DG: Assembly of microarrays for genome-wide measurement of DNA copy number. Nat Genet. 2001, 29: 263-4. 10.1038/ng754. (10.1038/ng754) / Nat Genet by AM Snijders (2001)
Carroll AS, Bishop AC, DeRisi JL, Shokat KM, O'Shea EK: Chemical inhibition of the Pho85 cyclin-dependent kinase reveals a role in the environmental stress response. Proc Natl Acad Sci U S A. 2001, 98: 12578-83. 10.1073/pnas.211195798. (10.1073/pnas.211195798) / Proc Natl Acad Sci U S A by AS Carroll (2001)
Gollub J, Ball CA, Binkley G, Demeter J, Finkelstein DB, Hebert JM, Hernandez-Boussard T, Jin H, Kaloper M, Matese JC: The Stanford Microarray Database: data access and quality assessment tools. Nucleic Acids Res. 2003, 31: 94-6. 10.1093/nar/gkg078. (10.1093/nar/gkg078) / Nucleic Acids Res by J Gollub (2003)

Dates

Type	When
Created	22 years, 2 months ago (June 12, 2003, 2:27 a.m.)
Deposited	11 months, 1 week ago (Sept. 13, 2024, 12:16 p.m.)
Indexed	1 month, 3 weeks ago (July 2, 2025, 3:08 p.m.)
Issued	22 years, 3 months ago (May 9, 2003)
Published	22 years, 3 months ago (May 9, 2003)
Published Online	22 years, 3 months ago (May 9, 2003)

Funders 0

None

BibTeX

@article{Liu_2003, title={Development and validation of a T7 based linear amplification for genomic DNA}, volume={4}, ISSN={1471-2164}, url={http://dx.doi.org/10.1186/1471-2164-4-19}, DOI={10.1186/1471-2164-4-19}, number={1}, journal={BMC Genomics}, publisher={Springer Science and Business Media LLC}, author={Liu, Chih Long and Schreiber, Stuart L and Bernstein, Bradley E}, year={2003}, month=may }

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