DOI: 10.1155/ijbi/2006/12186. Probabilistic Model‐Based Cell Tracking

10.1155/ijbi/2006/12186

Crossref journal-article

Wiley

International Journal of Biomedical Imaging (311)

Abstract

The study of cell behavior is of crucial importance in drug and disease research. The fields of bioinformatics and biotechnology rely on the collection, processing, and analysis of huge numbers of biocellular images, including cell features such as cell size, shape, and motility. However manual methods of inferring these values are so onerous that automated methods of cell tracking and segmentation are in high demand. In this paper, a novel model‐based cell tracker is designed to locate and track individual cells. The proposed cell tracker has been successfully applied to track hematopoietic stem cells (HSCs) based on identified cell locations and probabilistic data association.

Bibliography

Kachouie, N. N., Fieguth, P., Ramunas, J., & Jervis, E. (2006). Probabilistic ModelâBased Cell Tracking. International Journal of Biomedical Imaging, 2006(1). Portico.

Authors 4

Nezamoddin N. Kachouie (first)
Paul Fieguth (additional)
John Ramunas (additional)
Eric Jervis (additional)

References 28 Referenced 29

10.1097/00000478-199207000-00001
10.1093/ajcp/105.1.23
{'key': 'e_1_2_1_3_2', 'first-page': '12', 'article-title': 'Mantle cell lymphoma. Accurate diagnosis yields new clinical insights', 'volume': '120', 'author': 'Campo E.', 'year': '1996', 'journal-title': 'Archives of Pathology and Laboratory Medicine'} / Archives of Pathology and Laboratory Medicine / Mantle cell lymphoma. Accurate diagnosis yields new clinical insights by Campo E. (1996)
10.1093/ajcp/103.5.543
10.1109/34.400568
MarkiewiczT. OsowskiS. MoszczyńskiL. andSałat1R. Myelogenous leukemia cell image preprocessing for feature generation 70–73.
Meas-YedidV. CloppetF. RoumierA. AlcoverA. Olivo-MarinJ.-C. andStamonG. Quantitative microscopic image analysis by active contours 277–284.
10.1109/10.362924
{'volume-title': 'Computer Vision - A Modern Approach', 'year': '2003', 'author': 'Forsyth D. A.', 'key': 'e_1_2_1_9_2'} / Computer Vision - A Modern Approach by Forsyth D. A. (2003)
{'volume-title': 'Active Contours', 'year': '1997', 'author': 'Blake A.', 'key': 'e_1_2_1_10_2'} / Active Contours by Blake A. (1997)
{'volume-title': 'Vision: A Computational Investigation into the Human Representation and Processing of Visual Information', 'year': '1982', 'author': 'Marr D.', 'key': 'e_1_2_1_11_2'} / Vision: A Computational Investigation into the Human Representation and Processing of Visual Information by Marr D. (1982)
{'volume-title': 'Level Set Methods and Dynamic Implicit Surfaces', 'year': '2002', 'author': 'Osher S. J.', 'key': 'e_1_2_1_12_2'} / Level Set Methods and Dynamic Implicit Surfaces by Osher S. J. (2002)
{'volume-title': 'Level Set Methods and Fast Marching Methods Evolving Interfaces in Computational Geometry, Fluid Mechanics, Computer Vision and Materials Science', 'year': '1999', 'author': 'Sethian J. A.', 'key': 'e_1_2_1_13_2'} / Level Set Methods and Fast Marching Methods Evolving Interfaces in Computational Geometry, Fluid Mechanics, Computer Vision and Materials Science by Sethian J. A. (1999)
{'volume-title': 'Computer Vision', 'year': '2001', 'author': 'Shapiro L.', 'key': 'e_1_2_1_14_2'} / Computer Vision by Shapiro L. (2001)
{'volume-title': 'Introductory Techniques for 3D Computer Vision', 'year': '1998', 'author': 'Trucco E.', 'key': 'e_1_2_1_15_2'} / Introductory Techniques for 3D Computer Vision by Trucco E. (1998)
10.1109/34.927458
JervisE. Living cell tracking http://cape.uwaterloo.ca/~ericjj.
{'key': 'e_1_2_1_18_2', 'first-page': '541', 'article-title': 'Cell image segmentation for diagnostic pathology', 'author': 'Comaniciu D.', 'year': '2001', 'journal-title': 'Advanced Algorithmic Approaches to Medical Image Segmentation: State-of-the-Art Applications in Cardiology, Neurology, Mammography and Pathology'} / Advanced Algorithmic Approaches to Medical Image Segmentation: State-of-the-Art Applications in Cardiology, Neurology, Mammography and Pathology / Cell image segmentation for diagnostic pathology by Comaniciu D. (2001)
10.1002/1361-6374(199709)5:3<159::AID-BIO10>3.0.CO;2-5
10.1002/glia.20127
BienieckiW. Oversegmentation avoidance in watershed-based algorithms for color images 169–172.
AnoraganingrumD. Cell segmentation with median filter and mathematical morphology operation 1043–1046. (10.1109/ICIAP.1999.797734)
10.1049/el:19960738
10.1109/TSMC.1979.4310076
10.1006/cgip.1993.1040
10.1016/0005-1098(83)90059-6
{'key': 'e_1_2_1_27_2', 'first-page': '191', 'article-title': 'Track initiation and nearest neighbours incorporated into probabilistic data association', 'volume': '6', 'author': 'Colegrove S.', 'year': '1986', 'journal-title': 'Journal of Electrical and Electronics Engineering'} / Journal of Electrical and Electronics Engineering / Track initiation and nearest neighbours incorporated into probabilistic data association by Colegrove S. (1986)
{'volume-title': 'Tracking and Data Association', 'year': '1988', 'author': 'Bar-Shalom Y.', 'key': 'e_1_2_1_28_2'} / Tracking and Data Association by Bar-Shalom Y. (1988)

Dates

Type	When
Created	19 years ago (Aug. 2, 2006, 3:10 p.m.)
Deposited	7 months, 2 weeks ago (Jan. 10, 2025, 4:03 a.m.)
Indexed	3 weeks, 5 days ago (July 30, 2025, 9:33 a.m.)
Issued	19 years, 7 months ago (Jan. 1, 2006)
Published	19 years, 7 months ago (Jan. 1, 2006)
Published Online	19 years, 1 month ago (July 2, 2006)
Published Print	19 years, 7 months ago (Jan. 1, 2006)

Funders 1

Natural Sciences and Engineering Research Council of Canada 10.13039/501100000038
Region: Americas
gov (National government)
Labels3
1. Conseil de Recherches en Sciences Naturelles et en Génie du Canada
2. NSERC
3. CRSNG

BibTeX

@article{Kachouie_2006, title={Probabilistic Model‐Based Cell Tracking}, volume={2006}, ISSN={1687-4196}, url={http://dx.doi.org/10.1155/ijbi/2006/12186}, DOI={10.1155/ijbi/2006/12186}, number={1}, journal={International Journal of Biomedical Imaging}, publisher={Wiley}, author={Kachouie, Nezamoddin N. and Fieguth, Paul and Ramunas, John and Jervis, Eric}, year={2006}, month=jan }

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