Crossref journal-article
Annual Reviews
Annual Review of Physical Chemistry (22)
Abstract

▪ Abstract  We outline recent developments in biological single-molecule fluorescence detection with particular emphasis on observations by ratiometric fluorescence resonance energy transfer (FRET) of biomolecules freely diffusing in solution. Single-molecule-diffusion methodologies were developed to minimize perturbations introduced by interactions between molecules and surfaces. Confocal microscopy is used in combination with sensitive detectors to observe bursts of photons from fluorescently labeled biomolecules as they diffuse through the focal volume. These bursts are analyzed to extract ratiometric observables such as FRET efficiency and polarization anisotropy. We describe the development of single-molecule FRET methodology and its application to the observation of the Förster distance dependence and the study of protein folding and polymer physics problems. Finally, we discuss future advances in data acquisition and analysis techniques that can provide a more complete picture of the accessible molecular information.

Bibliography

Deniz, A. A., Laurence, T. A., Dahan, M., Chemla, D. S., Schultz, P. G., & Weiss, S. (2001). RATIOMETRICSINGLE-MOLECULESTUDIES OFFREELYDIFFUSINGBIOMOLECULES. Annual Review of Physical Chemistry, 52(1), 233–253.

Authors 6
  1. Ashok A Deniz (first)
  2. Ted A Laurence (additional)
  3. Maxime Dahan (additional)
  4. Daniel S Chemla (additional)
  5. Peter G Schultz (additional)
  6. Shimon Weiss (additional)
References 109 Referenced 181
  1. 10.1021/jp992505l
  2. 10.1126/science.283.5408.1676
  3. 10.1016/S0301-0104(99)00180-9
  4. 10.1126/science.283.5408.1670
  5. 10.1021/cr980132z
  6. 10.1146/annurev.physchem.49.1.441
  7. {'key': 'b7', 'volume-title': 'Single Molecule Optical Detection, Imaging and Spectroscopy.', 'author': 'Basche T', 'year': '1997'} / Single Molecule Optical Detection, Imaging and Spectroscopy. by Basche T (1997)
  8. 10.1146/annurev.biophys.26.1.567
  9. 10.1126/science.1749933
  10. 10.1002/pro.5560060701
  11. 10.1006/jmbi.2000.3735
  12. 10.1073/pnas.040580397
  13. 10.1073/pnas.96.6.2782
  14. 10.1073/pnas.96.19.10699
  15. 10.1006/jmbi.1994.0196
  16. 10.1016/S0959-440X(00)00072-5
  17. 10.1101/gad.14.9.1027 / Genes Dev. by Pawson T (2000)
  18. 10.1146/annurev.biochem.67.1.793
  19. 10.1006/jmbi.1999.2990
  20. 10.1073/pnas.97.10.5468
  21. 10.1016/S1074-5521(99)80020-9
  22. 10.1073/pnas.91.13.5740
  23. 10.1016/0168-1656(95)00054-T
  24. 10.1016/S1367-5931(98)80089-6
  25. 10.1073/pnas.96.20.11075
  26. 10.1038/78936
  27. 10.1038/78941
  28. 10.1016/S0009-2614(98)00096-7
  29. 10.1073/pnas.96.7.3670
  30. 10.1021/jp980965t
  31. 10.1016/S0006-3495(97)78833-7
  32. 10.1073/pnas.94.22.11753
  33. {'key': 'b33', 'first-page': '857', 'volume': '44', 'author': 'Widengren J', 'year': '1998', 'journal-title': 'Cell. Mol. Biol.'} / Cell. Mol. Biol. by Widengren J (1998)
  34. 10.1073/pnas.95.4.1416
  35. 10.1021/bi9922190
  36. 10.1016/S0301-0104(99)00132-9
  37. 10.1007/978-1-4757-3061-6
  38. 10.1073/pnas.58.2.719
  39. 10.1038/78948
  40. 10.1073/pnas.93.13.6264
  41. 10.1021/jp993954o
  42. 10.1126/science.288.5473.2048
  43. 10.1073/pnas.96.16.9077
  44. 10.1073/pnas.090104997
  45. 10.1016/S0301-0104(99)00127-5
  46. 10.1016/S0301-0104(99)00174-3
  47. 10.1073/pnas.96.3.893
  48. 10.1016/S0006-3495(98)77931-7
  49. 10.1038/35004044
  50. 10.1021/jp990948j
  51. 10.1073/pnas.95.14.8034
  52. 10.1096/fasebj.13.9002.S201
  53. 10.1073/pnas.120174297
  54. Deleted in proof
  55. 10.1021/jp993914k
  56. 10.1021/jp000059s
  57. 10.1021/jp993954o
  58. Deleted in proof
  59. 10.1073/pnas.72.5.1807
  60. 10.1016/S0006-3495(84)84040-0
  61. 10.1146/annurev.physchem.48.1.545
  62. 10.1016/S0959-440X(99)80012-8
  63. 10.1110/ps.8.6.1166
  64. 10.1073/pnas.95.19.11037
  65. 10.1016/S0959-440X(98)80012-2
  66. 10.1016/S0065-3233(00)53003-4
  67. 10.1146/annurev.biophys.29.1.327
  68. 10.1016/S0065-3233(00)53004-6
  69. 10.1016/S0959-440X(99)00043-3
  70. 10.1073/pnas.94.12.6170
  71. 10.1126/science.278.5345.1928
  72. 10.1073/pnas.96.11.6031
  73. 10.1073/pnas.96.11.5897
  74. 10.1038/nsb0197-10
  75. 10.1016/S0959-440X(99)80027-X
  76. 10.1016/S0959-440X(98)80043-2
  77. 10.1073/pnas.96.20.11299
  78. 10.1073/pnas.95.15.8473
  79. 10.1073/pnas.96.4.1273
  80. 10.1016/S0959-440X(99)80028-1
  81. 10.1006/jmbi.1995.0616
  82. 10.1021/bi00107a010
  83. 10.1021/bi00107a011
  84. 10.1021/bi00375a036
  85. {'key': 'b85', 'volume-title': 'Structure and Mechanism in Protein Science.', 'author': 'Fersht AR', 'year': '1999'} / Structure and Mechanism in Protein Science. by Fersht AR (1999)
  86. 10.1146/annurev.bi.60.070191.004051
  87. 10.1006/abio.2000.4641
  88. 10.1006/jmbi.2000.3508
  89. 10.1038/nsb0598-385
  90. 10.1073/pnas.96.18.10115
  91. 10.1038/9329
  92. Laurence TA, Deniz AA, Faulhaber AE, Dahan M, Chemla DS, et al. 2000. Presented at 44th Ann. Biophys. Soc. Meet. New Orleans
  93. 10.1007/3-540-58704-7_2
  94. 10.1002/9780470141533.ch1
  95. 10.1002/bip.1979.360180111
  96. 10.1006/jmbi.1998.2287
  97. 10.1126/science.271.5250.795
  98. 10.1038/35003614
  99. 10.1021/ac970545k
  100. 10.1016/S0006-3495(99)76912-2
  101. 10.1073/pnas.96.24.13756
  102. 10.1016/S0006-3495(00)76610-0
  103. 10.1016/S0006-3495(00)76722-1
  104. 10.1103/PhysRevLett.29.705
  105. 10.1126/science.282.5395.1877
  106. 10.1074/jbc.274.23.15967
  107. 10.1073/pnas.130589397
  108. 10.1016/S0301-0104(99)00098-1
  109. 10.1016/S0006-3495(00)76366-1
Dates
Type When
Created 23 years ago (July 27, 2002, 7:40 a.m.)
Deposited 2 years, 4 months ago (April 23, 2023, 2:39 p.m.)
Indexed 3 weeks ago (Aug. 3, 2025, 6:53 p.m.)
Issued 23 years, 10 months ago (Oct. 1, 2001)
Published 23 years, 10 months ago (Oct. 1, 2001)
Published Print 23 years, 10 months ago (Oct. 1, 2001)
Funders 0

None

@article{Deniz_2001, title={R<scp>ATIOMETRIC</scp>S<scp>INGLE</scp>-M<scp>OLECULE</scp>S<scp>TUDIES OF</scp>F<scp>REELY</scp>D<scp>IFFUSING</scp>B<scp>IOMOLECULES</scp>}, volume={52}, ISSN={1545-1593}, url={http://dx.doi.org/10.1146/annurev.physchem.52.1.233}, DOI={10.1146/annurev.physchem.52.1.233}, number={1}, journal={Annual Review of Physical Chemistry}, publisher={Annual Reviews}, author={Deniz, Ashok A and Laurence, Ted A and Dahan, Maxime and Chemla, Daniel S and Schultz, Peter G and Weiss, Shimon}, year={2001}, month=oct, pages={233–253} }