Crossref journal-article
Annual Reviews
Annual Review of Biomedical Engineering (22)
Abstract

▪ Abstract  This paper reviews literature, current concepts and approaches in computational anatomy (CA). The model of CA is a Grenander deformable template, an orbit generated from a template under groups of diffeomorphisms. The metric space of all anatomical images is constructed from the geodesic connecting one anatomical structure to another in the orbit. The variational problems specifying these metrics are reviewed along with their associated Euler-Lagrange equations. The Euler equations of motion derived by Arnold for the geodesics in the group of divergence-free volume-preserving diffeomorphisms of incompressible fluids are generalized for the larger group of diffeomorphisms used in CA with nonconstant Jacobians. Metrics that accommodate photometric variation are described extending the anatomical model to incorporate the construction of neoplasm. Metrics on landmarked shapes are reviewed as well as Joshi's diffeomorphism metrics, Bookstein's thin-plate spline approximate-metrics, and Kendall's affine invariant metrics. We conclude by showing recent experimental results from the Toga & Thompson group in growth, the Van Essen group in macaque and human cortex mapping, and the Csernansky group in hippocampus mapping for neuropsychiatric studies in aging and schizophrenia.

Bibliography

Miller, M. I., Trouvé, A., & Younes, L. (2002). On the Metrics and Euler-Lagrange Equations of Computational Anatomy. Annual Review of Biomedical Engineering, 4(1), 375–405.

Authors 3
  1. Michael I. Miller (first)
  2. Alain Trouvé (additional)
  3. Laurent Younes (additional)
References 130 Referenced 337
  1. 10.1191/096228097673360480
  2. 10.1090/qam/1668732
  3. {'volume-title': 'General Pattern Theory.', 'year': '1993', 'author': 'Grenander U', 'key': 'b3'} / General Pattern Theory. by Grenander U (1993)
  4. 10.1146/annurev.fl.24.010192.001045
  5. {'volume-title': 'Mapping the Brain and Its Functions: Integrating Enabling Technologies in Neuroscience Research.', 'year': '1991', 'author': 'Pechura CM', 'key': 'b5'} / Mapping the Brain and Its Functions: Integrating Enabling Technologies in Neuroscience Research. by Pechura CM (1991)
  6. 10.1097/00004728-199101000-00003
  7. 10.1097/00004728-198308000-00008
  8. 10.1097/00004728-198907000-00009
  9. 10.1109/38.144829
  10. 10.1006/nimg.1995.1012
  11. 10.1117/3.831079.ch17
  12. 10.1098/rstb.2001.0915
  13. 10.1162/jocn.1992.4.4.352
  14. 10.1093/cercor/3.4.313
  15. 10.1056/NEJM199208273270905
  16. 10.1007/978-3-642-93093-5
  17. 10.1006/cviu.1996.0499
  18. 10.1109/42.906425
  19. 10.1007/3-540-45468-3_88
  20. {'key': 'b20', 'first-page': '1', 'volume-title': 'IMIA Yearbk. Med. Inform,', 'author': 'Ayache N', 'year': '2002'} / IMIA Yearbk. Med. Inform, by Ayache N (2002)
  21. 10.1006/cviu.1995.1015
  22. 10.1006/gmip.1996.0042
  23. 10.1016/S0734-189X(89)80014-3
  24. 10.1117/12.185179
  25. Gee JC, Bajcsy RK. 1999. Elastic matching: continuum mechanical and probabilistic analysis. See Ref.123, pp. 183–97 (10.1016/B978-012692535-7/50087-2)
  26. Gee JC, Haynor DR. 1999. Numerical methods for high-dimensional warps. See Ref.123, pp. 101–113 (10.1016/B978-012692535-7/50082-3)
  27. 10.1016/S0031-3203(98)00093-4
  28. Bookstein FL, Green WDK. 1992.Edge information at landmarks in medical images.InSPIE Proc. Visual. Biomed. Comput. 1992, ed. RA Robb, 1808:242–58. Bellingham, WA: SPIE (10.1117/12.131082)
  29. {'volume-title': 'Morphometric Tools for Landmark Data.', 'year': '1991', 'author': 'Bookstein FL', 'key': 'b29'} / Morphometric Tools for Landmark Data. by Bookstein FL (1991)
  30. 10.1016/0092-8240(95)00329-0
  31. 10.1007/3-540-63046-5_3
  32. 10.1006/cviu.1997.0607
  33. 10.1109/42.896780
  34. 10.1162/jocn.1993.5.2.162
  35. 10.1006/nimg.1998.0395
  36. 10.1006/nimg.1998.0396
  37. 10.1002/(SICI)1097-0193(1999)8:4<272::AID-HBM10>3.0.CO;2-4
  38. Wang Y, Staib LH. 1998. Integrated approaches to non-rigid registration in medical images.Proc. IEEE Worksh. Appl. Comput. Vis., 4th, pp. 102–8, Princeton, NJ
  39. Wang Y, Staib LH. 1998. Elastic model based non-rigid registration incorporating statistical shape information.Proc. Int. Conf. Med. Image Comput. Comput.Assist. Inter., 1st, pp. 1162–73, Cambridge, MA (10.1007/BFb0056306)
  40. 10.1109/34.166621
  41. 10.1109/42.544503
  42. 10.1109/34.745730
  43. 10.1109/CVPR.2000.854933
  44. 10.1109/34.865192
  45. 10.1038/jcbfm.1988.92
  46. {'key': 'b46', 'first-page': '236', 'volume': '1445', 'author': 'Evans AC', 'year': '1991', 'journal-title': 'Image Process.'} / Image Process. by Evans AC (1991)
  47. 10.1097/00004728-199403000-00005
  48. 10.1002/hbm.460030303
  49. 10.1002/hbm.460030304
  50. Evans AC, Collins DL, Holmes CJ. 1996.Computational approaches to quantifying human neuroanatomical variability.InBrain Mapping: The Methods, ed. J Mazziotta, AW Toga, pp. 343–61. San Diego: Academic
  51. 10.1126/science.283.5409.1908
  52. 10.1001/archpsyc.56.7.649
  53. 10.1006/nimg.2001.0862
  54. 10.1097/00004728-199107000-00020
  55. 10.1006/nimg.2001.0786
  56. 10.1073/pnas.90.24.11944
  57. 10.1111/j.2517-6161.1994.tb02000.x / J. R. Stat. Soc. B by Grenander U (1994)
  58. {'key': 'b58', 'first-page': '278', 'volume': '2573', 'author': 'Joshi SC', 'year': '1995', 'journal-title': 'Proc. SPIE Int. Symp. Opt. Sci. Eng. Instr.'} / Proc. SPIE Int. Symp. Opt. Sci. Eng. Instr. by Joshi SC (1995)
  59. 10.1109/83.536892
  60. {'key': 'b60', 'first-page': '1031', 'volume': '321', 'author': 'Trouvé A', 'year': '1995', 'journal-title': 'C. R. Acad. Sci. Paris Sér. I'} / C. R. Acad. Sci. Paris Sér. I by Trouvé A (1995)
  61. 10.1148/radiology.199.3.8638006
  62. 10.1148/radiology.202.2.9015081
  63. 10.1109/42.650882
  64. 10.1142/S0218001497000615
  65. 10.1090/qam/1632326
  66. 10.1073/pnas.95.3.788
  67. 10.1002/(SICI)1097-0193(1998)6:5/6<329::AID-HBM1>3.3.CO;2-O
  68. 10.1137/S0036139995287685
  69. 10.1109/83.855431
  70. {'key': 'b70', 'first-page': '710', 'volume': '3661', 'author': 'Bakircioglu M', 'year': '1999', 'journal-title': 'Proc. SPIE Med. Imaging Image Process.'} / Proc. SPIE Med. Imaging Image Process. by Bakircioglu M (1999)
  71. 10.1023/A:1011161132514
  72. 10.1006/nimg.2000.0666
  73. 10.1006/nimg.2001.0906
  74. 10.1006/nimg.1999.0428
  75. 10.1109/34.730559 / Pattern Anal. Mach. Intell. by Miller MI (1998)
  76. 10.1023/A:1008001603737
  77. {'journal-title': 'Local Analysis on a Shape Manifold.', 'year': '2002', 'author': 'Trouvé A', 'key': 'b77'} / Local Analysis on a Shape Manifold. by Trouvé A (2002)
  78. Sandor T, Jolesz F, Tieman J, Kikinis R, LeMay M, Albert M. 1991.Extraction of morphometric information from dual echo magnetic resonance brain images.InVisual Communications and Image Processing '90: SPIE Proceedings, 1360:665–75. Bellingham, WA: SPIE (10.1117/12.24253)
  79. 10.1001/archpsyc.1993.01820150036003
  80. 10.1016/0920-9964(94)00067-I
  81. 10.1006/nimg.1997.0274
  82. 10.1016/S0167-8191(98)00061-1
  83. 10.1097/00004728-200007000-00004
  84. 10.1097/00004728-199607000-00031
  85. 10.1097/00004728-199601000-00017
  86. 10.1109/42.790458
  87. 10.1006/cviu.1997.0605
  88. 10.1016/S0262-8856(00)00056-1
  89. 10.1109/42.938251
  90. 10.1016/S1361-8415(97)85003-7
  91. 10.1109/42.921475
  92. 10.1109/42.781013
  93. 10.1146/annurev.bioeng.2.1.315
  94. 10.1017/CBO9780511626319
  95. 10.1002/hbm.1037
  96. 10.1109/42.650881
  97. 10.1007/10704282_31
  98. Toga AW, Thompson P, Payne BA. 1996.Modeling morphometric changes of the brain during development.InDevelopment Neuroimaging: Mapping the Development of Brain and Behavior, ed. RW Thatcher, G Reid Lyon, J Rumsey, N Krasnegor, pp. 15–27. San Diego: Academic
  99. Toga AW, Thompson PM. 1999. An introduction to brain warping. See Ref.123, pp. 1–26 (10.1016/B978-012692535-7/50077-X)
  100. Thompson PM, Toga AW. 1999. Anatomically driven strategies for highdimensional brain image warping and pathology detection. See Ref.123, pp. 311–36 (10.1016/B978-012692535-7/50094-X)
  101. 10.1038/35004593
  102. 10.1073/pnas.201243998
  103. 10.1523/JNEUROSCI.17-18-07079.1997
  104. 10.1016/S0042-6989(01)00045-1
  105. 10.1162/jocn.1996.8.1.1
  106. 10.1146/annurev.neuro.22.1.145
  107. 10.1162/089892900562561
  108. Terzopoulos D. 1984.Multiresolution computation of visible-surface representations. PhD Thesis, Massachusetts Institute of Technology, Boston, MA
  109. 10.1002/vis.4340010208
  110. 10.1109/42.293928
  111. 10.1109/34.85659
  112. 10.1109/34.85660
  113. 10.1109/34.659928
  114. 10.1109/34.922706
  115. 10.1006/cviu.1995.1004
  116. 10.1016/0262-8856(96)01097-9
  117. 10.1109/34.927467
  118. Mumford D. 1998.Pattern theory and vision.InQuestions Matheématiques En Traitement Du Signal et de L'Image, Chapter 3, pp. 7–13. Paris: Institut Henri Poincaré
  119. {'volume-title': 'An Introduction to Differentiable Manifolds and Riemannian Geometry.', 'year': '1986', 'author': 'Boothby WM', 'key': 'b119'} / An Introduction to Differentiable Manifolds and Riemannian Geometry. by Boothby WM (1986)
  120. 10.1007/978-0-387-21792-5
  121. 10.1112/blms/16.2.81
  122. {'volume-title': 'Orthogonal Functions.', 'year': '1959', 'author': 'Giovanni S', 'key': 'b122'} / Orthogonal Functions. by Giovanni S (1959)
  123. 10.1016/S0896-6273(00)80593-0
  124. 10.1214/aop/1176990228
  125. 10.2307/2290581
  126. 10.1073/pnas.95.19.11406
  127. 10.1212/WNL.55.11.1636
  128. 10.1006/nimg.2001.0830
  129. {'volume-title': 'An Introduction to Multivariate Statistical Analysis.', 'year': '1984', 'author': 'Anderson TW', 'key': 'b129'} / An Introduction to Multivariate Statistical Analysis. by Anderson TW (1984)
  130. {'volume-title': 'Brain Warping.', 'year': '1999', 'author': 'Toga AW', 'key': 'b130'} / Brain Warping. by Toga AW (1999)
Dates
Type When
Created 23 years, 1 month ago (July 28, 2002, 7:12 p.m.)
Deposited 8 months, 2 weeks ago (Dec. 9, 2024, 1:02 p.m.)
Indexed 3 weeks, 5 days ago (Aug. 3, 2025, 12:18 a.m.)
Issued 23 years ago (Aug. 1, 2002)
Published 23 years ago (Aug. 1, 2002)
Published Print 23 years ago (Aug. 1, 2002)
Funders 0

None

@article{Miller_2002, title={On the Metrics and Euler-Lagrange Equations of Computational Anatomy}, volume={4}, ISSN={1545-4274}, url={http://dx.doi.org/10.1146/annurev.bioeng.4.092101.125733}, DOI={10.1146/annurev.bioeng.4.092101.125733}, number={1}, journal={Annual Review of Biomedical Engineering}, publisher={Annual Reviews}, author={Miller, Michael I. and Trouvé, Alain and Younes, Laurent}, year={2002}, month=aug, pages={375–405} }