DOI: 10.1128/jb.177.23.6993-6998.1995. Fragmentations of the large-subunit rRNA in the family Rhizobiaceae

Fragmentations of the large-subunit rRNA in the family Rhizobiaceae

10.1128/jb.177.23.6993-6998.1995

Crossref journal-article

American Society for Microbiology

Journal of Bacteriology (235)

Abstract

A 130-nucleotide-long rRNA species corresponding to the 5' end of the 23S rRNA gene was found in 96 strains belonging to different Rhizobium, Bradyrhizobium, and Agrobacterium species. Additional fragmentation in the central region of the large-subunit rRNA occurred in all agrobacteria, except Agrobacterium vitis, and in most Rhizobium leguminosarum and Rhizobium etli strains but did not occur in any of the other rhizobia and bradyrhizobia studied.

Bibliography

Selenska-Pobell, S., & Evguenieva-Hackenberg, E. (1995). Fragmentations of the large-subunit rRNA in the family Rhizobiaceae. Journal of Bacteriology, 177(23), 6993â6998.

Authors 2

S Selenska-Pobell (first)
E Evguenieva-Hackenberg (additional)

References 18 Referenced 40

Beringer , J. E. 1974 . R-factor transfer in Rhizobium leguminosarum . J. Gen. Microbiol. 84 : 188 - 198 . / J. Gen. Microbiol. / R-factor transfer in Rhizobium leguminosarum by Beringer J. E. (1974)
Boehringer Mannheim Biochemica. 1993. The DIG system user's guide for filter hybridization. Boehringer Mannheim GmbH Mannheim Germany.
Brosius , J. , T. Dull , and H. F. Noller . 1980 . Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli . Proc. Natl. Acad. Sci. USA 77 : 201 - 206 . (10.1073/pnas.77.1.201) / Proc. Natl. Acad. Sci. USA / Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli by Brosius J. (1980)
Burgin , A. B. , K. Parodos , D. J. Lane , and N. R. Pace . 1990 . The excision of intervening sequences from Salmonella 23S ribosomal RNA . Cell 60 : 405 - 414 . (10.1016/0092-8674(90)90592-3) / Cell / The excision of intervening sequences from Salmonella 23S ribosomal RNA by Burgin A. B. (1990)
De Lanversin , G. , and B. Jacq . 1989 . Sequence and secondary structure of the central domain of Drosophila 26S rRNA: a universal model for the central domain of the large rRNA containing the region in which the central break may happen . J. Mol. Biol. 28 : 403 - 417 . / J. Mol. Biol. / Sequence and secondary structure of the central domain of Drosophila 26S rRNA: a universal model for the central domain of the large rRNA containing the region in which the central break may happen by De Lanversin G. (1989)
Dryden , S. C. , and S. Kaplan . 1990 . Localisation and structural analysis of the ribosomal RNA operons of Rhodobacter sphaeroides . Nucleic Acids Res. 18 : 7267 - 7277 . (10.1093/nar/18.24.7267) / Nucleic Acids Res. / Localisation and structural analysis of the ribosomal RNA operons of Rhodobacter sphaeroides by Dryden S. C. (1990)
Evguenieva-Hackenberg E. and S. Selenska-Pobell. Variability of the 5~- end of the large subunit rDNA and the presence of a new short class of rRNA in Rhizobiaceae. Lett. Appl. Microbiol. in press.
Gutell , R. R. , M. W. Gray , and M. Schnare . 1993 . A compilation of large subunit (23S and 23S-like) ribosomal RNA structures . Nucleic Acids Res. 21 : 3055 - 3074 . (10.1093/nar/21.13.3055) / Nucleic Acids Res. / A compilation of large subunit (23S and 23S-like) ribosomal RNA structures by Gutell R. R. (1993)
Höpfl , P. , W. Ludwig , K. H. Schleifer , and N. Larsen . 1989 . The 23S ribosomal RNA higher-order structure of Pseudomonas cepacia . Eur. J. Biochem. 185 : 355 - 364 . (10.1111/j.1432-1033.1989.tb15123.x) / Eur. J. Biochem. / The 23S ribosomal RNA higher-order structure of Pseudomonas cepacia by Höpfl P. (1989)
Hsu , D. , Y. C. Zee , J. Ingraham , and L. -M. Shih . 1992 . Diversity of cleavage patterns of Salmonella 23S rRNA . J. Gen. Microbiol. 138 : 199 - 203 . (10.1099/00221287-138-1-199) / J. Gen. Microbiol. / Diversity of cleavage patterns of Salmonella 23S rRNA by Hsu D. (1992)
Jacq , B. 1981 . Sequence homologies between eucaryotic 5.8S rRNA and the 5~ end of procaryotic 23S rRNA: evidences for a common evolutionary origin . Nucleic Acids. Res. 9 : 2913 - 2932 . (10.1093/nar/9.12.2913) / Nucleic Acids. Res. / Sequence homologies between eucaryotic 5.8S rRNA and the 5~ end of procaryotic 23S rRNA: evidences for a common evolutionary origin by Jacq B. (1981)
Kordes , E. , S. Jock , J. Fritsch , F. Bosch , and G. Klug . 1994 . Cloning of a gene involved in rRNA precursor processing and 23S rRNA cleavage in Rhodobacter capsulatus . J. Bacteriol. 176 : 1121 - 1127 . (10.1128/jb.176.4.1121-1127.1994) / J. Bacteriol. / Cloning of a gene involved in rRNA precursor processing and 23S rRNA cleavage in Rhodobacter capsulatus by Kordes E. (1994)
Krishnapillai , K. , J. Nash , and E. Lanka . 1984 . Insertion mutants in the promiscuous IncP-1 plasmid R 18 which affect its host range between Pseudomonas species . Plasmid 12 : 170 - 180 . (10.1016/0147-619X(84)90041-6) / Plasmid / Insertion mutants in the promiscuous IncP-1 plasmid R 18 which affect its host range between Pseudomonas species by Krishnapillai K. (1984)
Ludwig , W. , and K. H. Schleifer . 1994 . Bacterial phylogeny based on 16S and 23S rRNA sequence analysis . FEMS Microbiol. Rev. 15 : 155 - 173 . (10.1111/j.1574-6976.1994.tb00132.x) / FEMS Microbiol. Rev. / Bacterial phylogeny based on 16S and 23S rRNA sequence analysis by Ludwig W. (1994)
Masterson , R. V. , R. K. Prakash , and A. G. Atherly . 1985 . Conservation of symbiotic nitrogen fixation gene sequences in Rhizobium japonicum and Bradyrhizobium japonicum . J. Bacteriol. 163 : 21 - 26 . (10.1128/jb.163.1.21-26.1985) / J. Bacteriol. / Conservation of symbiotic nitrogen fixation gene sequences in Rhizobium japonicum and Bradyrhizobium japonicum by Masterson R. V. (1985)
Ralph , D. , and M. McClelland . 1993 . Intervening sequence with conserved open reading frame in eubacterial 23S rRNA genes . Proc. Natl. Acad. Sci. USA 90 : 6864 - 6868 . (10.1073/pnas.90.14.6864) / Proc. Natl. Acad. Sci. USA / Intervening sequence with conserved open reading frame in eubacterial 23S rRNA genes by Ralph D. (1993)
Sambrook J. E. F. Fritsch and T. Maniatis. 1989. Molecular cloning: a laboratory manual 2nd ed. Cold Spring Harbor Laboratory Cold Spring Harbor N.Y.
Trust , T. J. , S. M. Logan , C. E. Gustafson , P. J. Romaniuk , N. W. Kim , V. L. Chan , M. A. Ragan , P. Guerry , and R. R. Gutell . 1994 . Phylogenetic and molecular characterization of a 23S rRNA gene positions the genus Campylobacter in the epsilon subdivision of the Proteobacteria and shows that the presence of transcribed spacers is common in Campylobacter spp . J. Bacteriol. 176 : 4597 - 4609 . (10.1128/jb.176.15.4597-4609.1994) / J. Bacteriol. / Phylogenetic and molecular characterization of a 23S rRNA gene positions the genus Campylobacter in the epsilon subdivision of the Proteobacteria and shows that the presence of transcribed spacers is common in Campylobacter spp by Trust T. J. (1994)

Dates

Type	When
Created	8 years, 9 months ago (Nov. 9, 2016, 10:17 a.m.)
Deposited	4 years, 1 month ago (July 29, 2021, 1:53 p.m.)
Indexed	3 months, 2 weeks ago (May 18, 2025, 10:25 a.m.)
Issued	29 years, 9 months ago (Dec. 1, 1995)
Published	29 years, 9 months ago (Dec. 1, 1995)
Published Print	29 years, 9 months ago (Dec. 1, 1995)

Funders 0

None

BibTeX

@article{Selenska_Pobell_1995, title={Fragmentations of the large-subunit rRNA in the family Rhizobiaceae}, volume={177}, ISSN={1098-5530}, url={http://dx.doi.org/10.1128/jb.177.23.6993-6998.1995}, DOI={10.1128/jb.177.23.6993-6998.1995}, number={23}, journal={Journal of Bacteriology}, publisher={American Society for Microbiology}, author={Selenska-Pobell, S and Evguenieva-Hackenberg, E}, year={1995}, month=dec, pages={6993–6998} }

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