Abstract
ABSTRACT Strains of Pseudomonas aeruginosa isolated from the respiratory tracts of patients with cystic fibrosis often display a mucoid morphology due to high levels of expression of the exopolysaccharide alginate. The response regulator AlgB is required for full transcription of the alginate biosynthetic operon. Repeated attempts to demonstrate a direct interaction between AlgB and the promoter region of algD , the first gene in the alginate operon, have thus far been unsuccessful. The possibility that AlgB exerts its effect on algD indirectly exists. To identify putative genes under the control of AlgB which affect algD transcription, transposon mutagenesis of nonmucoid algB derivatives of the mucoid strain FRD1 was employed. Of approximately 3,000 transposon mutants screened, 6 were found to display phenotypes which were mucoid relative to the phenotype of the parental algB strain. The phenotypes of these mutants ranged from being only slightly mucoid to being indistinguishable from that of the original FRD1 strain. One of the particularly mucoid transposon mutants was chosen for further study. This strain was found to be disrupted in a previously uncharacterized open reading frame with 56% amino acid identity to PepA of Escherichia coli . PepA is classified as a leucine aminopeptidase, and homologs have been detected in a number of bacterial, plant, and animal species. This novel gene has been designated phpA ( P. aeruginosa homolog of pepA ). The insertional inactivation of phpA was found to correlate with the mucoid phenotype and an increase in algD transcription in the algB strain. Expression of phpA from an ectopic chromosomal locus compensated for the transposon insertion in the native phpA gene, restoring algD transcription to levels similar to those observed in the parental algB strain. While phpA expression did not appear to be under the control of AlgB at the transcriptional level, this study demonstrates that loss of phpA in an algB genetic background had a positive effect on alginate expression and, more specifically, on transcription of the alginate biosynthetic operon.
References
54
Referenced
35
10.1093/nar/25.17.3389
-
Baynham P. J. Wozniak D. J. Identification and characterization of AlgZ, an AlgT-dependent DNA binding protein required for Pseudomonas aeruginosa algD transcription.Mol. Microbiol.22199697108
(
10.1111/j.1365-2958.1996.tb02659.x
) / Mol. Microbiol. / Identification and characterization of AlgZ, an AlgT-dependent DNA binding protein required for Pseudomonas aeruginosa algD transcription by Baynham P. J. (1996) 10.1128/jb.171.5.2312-2317.1989
-
Bjork G. R. Wikstrom P. M. Bystrom A. S. Prevention of translational frameshifting by the modified nucleoside 1-methylguanosine.Science2441989986989
(
10.1126/science.2471265
) / Science / Prevention of translational frameshifting by the modified nucleoside 1-methylguanosine by Bjork G. R. (1989) 10.1126/science.277.5331.1453
10.1128/jb.178.2.511-523.1996
-
Boyer H. W. Roullard-Dussoix D. A complementation analysis of the restriction and modification of DNA in Escherichia coli.J. Mol. Biol.411969459472
(
10.1016/0022-2836(69)90288-5
) / J. Mol. Biol. / A complementation analysis of the restriction and modification of DNA in Escherichia coli by Boyer H. W. (1969) -
Bukau B. Regulation of the Escherichia coli heat-shock response.Mol. Microbiol.91993671680
(
10.1111/j.1365-2958.1993.tb01727.x
) / Mol. Microbiol. / Regulation of the Escherichia coli heat-shock response by Bukau B. (1993) -
Burley S. K. David P. R. Sweet R. M. Taylor A. Lipscomb W. N. Structure determination and refinement of bovine lens leucine aminopeptidase and its complex with bestatin.J. Mol. Biol.2241992113140
(
10.1016/0022-2836(92)90580-D
) / J. Mol. Biol. / Structure determination and refinement of bovine lens leucine aminopeptidase and its complex with bestatin by Burley S. K. (1992) -
Bystrom A. S. Hjalmarsson K. J. Wikstrom P. M. Bjork G. R. The nucleotide sequence of an Escherichia coli operon containing genes for the tRNA (m1G) methyltransferase, the ribosomal proteins S16 and L19 and a 21-K polypeptide.EMBO J.21983899905
(
10.1002/j.1460-2075.1983.tb01519.x
) / EMBO J. / The nucleotide sequence of an Escherichia coli operon containing genes for the tRNA (m1G) methyltransferase, the ribosomal proteins S16 and L19 and a 21-K polypeptide by Bystrom A. S. (1983) -
Carter J. Franden M. Lippincott J. McHenry C. Identification, molecular cloning and characterization of the gene encoding the χ subunit of DNA polymerase III holoenzyme of Escherichia coli.Mol. Gen. Genet.2411993399408
(
10.1007/BF00284693
) / Mol. Gen. Genet. / Identification, molecular cloning and characterization of the gene encoding the χ subunit of DNA polymerase III holoenzyme of Escherichia coli by Carter J. (1993) -
Charlier D. Gigot D. Huysveld N. Roovers M. Piérard A. Glansdorff N. Pyrimidine regulation of the Escherichia coli and Salmonella typhimurium carAB operons: CarP and integration host factor (IHF) modulate the methylation status of a GATC site present in the control region.J. Mol. Biol.2501995383391
(
10.1006/jmbi.1995.0384
) / J. Mol. Biol. / Pyrimidine regulation of the Escherichia coli and Salmonella typhimurium carAB operons: CarP and integration host factor (IHF) modulate the methylation status of a GATC site present in the control region by Charlier D. (1995) -
Charlier D. Hassanzadeh G. Kholti A. Gigot D. Piérard A. Glansdorff N. carP, involved in pyrimidine regulation of the Escherichia coli carbamoylphosphate synthetase operon encodes a sequence-specific DNA-binding protein identical to XerB and PepA, also required for resolution of ColE1 multimers.J. Mol. Biol.2501995392406
(
10.1006/jmbi.1995.0385
) / J. Mol. Biol. / carP, involved in pyrimidine regulation of the Escherichia coli carbamoylphosphate synthetase operon encodes a sequence-specific DNA-binding protein identical to XerB and PepA, also required for resolution of ColE1 multimers by Charlier D. (1995) 10.1128/jb.176.21.6677-6687.1994
-
Erickson J. W. Gross C. A. Identification of the subunit of Escherichia coli RNA polymerase: a second alternate sigma factor involved in high-temperature gene expression.Genes Dev.3198914621471
(
10.1101/gad.3.9.1462
) / Genes Dev. / Identification of the subunit of Escherichia coli RNA polymerase: a second alternate sigma factor involved in high-temperature gene expression by Erickson J. W. (1989) -
Fellay R. Frey J. Krisch H. Interposon mutagenesis of soil and water bacteria: a family of DNA fragments designed for in vitro insertional mutagenesis of Gram-negative bacteria.Gene521987147154
(
10.1016/0378-1119(87)90041-2
) / Gene / Interposon mutagenesis of soil and water bacteria: a family of DNA fragments designed for in vitro insertional mutagenesis of Gram-negative bacteria by Fellay R. (1987) 10.1073/pnas.76.4.1648
-
Fleischmann R. D. Adams M. D. White O. Clayton R. A. Kirkness E. F. Kerlavage A. R. Bult C. J. Tomb J. F. Dougherty B. A. Merrick J. M. E. A. Whole-genome sequencing and assembly of Haemophilus influenzae Rd.Science2691995496512
(
10.1126/science.7542800
) / Science / Whole-genome sequencing and assembly of Haemophilus influenzae Rd by Fleischmann R. D. (1995) 10.1128/jb.170.4.1452-1460.1988
-
Fürste J. P. Pansegrau W. Frank R. Blöcker H. Scholz P. Bagdasarian M. Lanka E. Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector.Gene481986119131
(
10.1016/0378-1119(86)90358-6
) / Gene / Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector by Fürste J. P. (1986) -
Goff S. A. Goldberg A. L. Production of abnormal proteins in Escherichia coli stimulates transcription of lon and other heat shock genes.Cell411985587595
(
10.1016/S0092-8674(85)80031-3
) / Cell / Production of abnormal proteins in Escherichia coli stimulates transcription of lon and other heat shock genes by Goff S. A. (1985) -
Goldberg J. B. Dahnke T. Pseudomonas aeruginosa AlgB, which modulates the expression of alginate, is a member of the NtrC subclass of prokaryotic regulators.Mol. Microbiol.619925966
(
10.1111/j.1365-2958.1992.tb00837.x
) / Mol. Microbiol. / Pseudomonas aeruginosa AlgB, which modulates the expression of alginate, is a member of the NtrC subclass of prokaryotic regulators by Goldberg J. B. (1992) 10.1128/jb.169.4.1593-1602.1987
10.1128/mr.60.3.539-574.1996
-
Grunstein M. Hogness D. Colony hybridization: a method for the isolation of cloned DNAs that contain a specific gene.Proc. Natl. Acad. Sci. USA7219753961
(
10.1073/pnas.72.10.3961
) / Proc. Natl. Acad. Sci. USA / Colony hybridization: a method for the isolation of cloned DNAs that contain a specific gene by Grunstein M. (1975) 10.1046/j.1365-2958.1998.00727.x
10.1128/aem.59.12.4330-4334.1993
10.1128/br.33.3.419-443.1969
- Holloway B. W. Pseudomonas genetics and taxonomy Molecular biology of pseudomonads. Nakazawa T. Furukawa K. Haas D. Silver S. 1996 22 32 ASM Press Washington D.C
10.1128/jb.176.18.5648-5653.1994
10.1128/JB.180.4.956-968.1998
- Maniatis T. Fritsch E. F. Sambrook J. Molecular cloning: a laboratory manual. 1982 Cold Spring Harbor Laboratory Cold Spring Harbor N.Y
10.1128/jb.175.4.1153-1164.1993
-
Martin D. W. Schurr M. J. Mudd M. H. Govan J. R. W. Holloway B. W. Deretic V. Mechanism of conversion to mucoidy in Pseudomonas aeruginosa infecting cystic fibrosis patients.Proc. Natl. Acad. Sci. USA90199383778381
(
10.1073/pnas.90.18.8377
) / Proc. Natl. Acad. Sci. USA / Mechanism of conversion to mucoidy in Pseudomonas aeruginosa infecting cystic fibrosis patients by Martin D. W. (1993) 10.1128/jb.176.21.6688-6696.1994
-
McCulloch R. Burke M. E. Sherratt D. J. Peptidase activity of Escherichia coli aminopeptidase A is not required for its role in Xer site-specific recombination.Mol. Microbiol.121994241251
(
10.1111/j.1365-2958.1994.tb01013.x
) / Mol. Microbiol. / Peptidase activity of Escherichia coli aminopeptidase A is not required for its role in Xer site-specific recombination by McCulloch R. (1994) 10.1128/iai.33.1.142-148.1981
10.1016/0378-1119(84)90059-3
10.1128/jb.178.1.85-93.1996
10.1128/jb.178.16.4997-5004.1996
-
Schweizer H. P. Hoang T. T. An improved system for gene replacement and xylE fusion analysis in Pseudomonas aeruginosa.Gene15819951522
(
10.1016/0378-1119(95)00055-B
) / Gene / An improved system for gene replacement and xylE fusion analysis in Pseudomonas aeruginosa by Schweizer H. P. (1995) -
Simon R. Quandt J. Klipp W. New derivatives of transposon Tn5 suitable for mobilization of replicons, generation of operon fusions and induction of genes in Gram-negative bacteria.Gene801989161169
(
10.1016/0378-1119(89)90262-X
) / Gene / New derivatives of transposon Tn5 suitable for mobilization of replicons, generation of operon fusions and induction of genes in Gram-negative bacteria by Simon R. (1989) 10.1016/S0022-2836(75)80083-0
-
Staskawicz B. Dahlbeck D. Keen N. Napoli C. Molecular characterization of cloned avirulence genes from race-0 and race-1 of Pseudomonas syringae pv. glycinea.J. Bacteriol.169198757895794
(
10.1128/JB.169.12.5789-5794.1987
) / J. Bacteriol. / Molecular characterization of cloned avirulence genes from race-0 and race-1 of Pseudomonas syringae pv. glycinea by Staskawicz B. (1987) 10.1002/j.1460-2075.1989.tb03547.x
-
Stock
J. B.
Surette
M. G.
Levit
M.
Park
P.
Two-component signal transduction systems: structure-function relationships and mechanisms of catalysis
Two-component signal transduction.
Hoch
J. A.
Silhavy
T. J.
1995
25
51
ASM Press
Washington D.C
(
10.1128/9781555818319.ch3
) 10.1128/iai.59.2.471-477.1991
-
Vieira J. Messing J. The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers.Gene191982259268
(
10.1016/0378-1119(82)90015-4
) / Gene / The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers by Vieira J. (1982) -
Vogt V. M. Purification and properties of an aminopeptidase from Escherichia coli.J. Biol. Chem.245197047604769
(
10.1016/S0021-9258(18)62858-3
) / J. Biol. Chem. / Purification and properties of an aminopeptidase from Escherichia coli by Vogt V. M. (1970) 10.1128/jb.173.4.1406-1413.1991
10.1128/jb.176.19.6007-6014.1994
10.1128/jb.178.16.4990-4996.1996
-
Yanisch-Perron C. Vieira J. Messing J. Improved M13 cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.Gene331985103119
(
10.1016/0378-1119(85)90120-9
) / Gene / Improved M13 cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors by Yanisch-Perron C. (1985) 10.1128/JB.180.10.2779-2781.1998
Dates
Type | When |
---|---|
Created | 5 years, 8 months ago (Dec. 31, 2019, 11:33 a.m.) |
Deposited | 4 years, 1 month ago (July 29, 2021, 1:47 p.m.) |
Indexed | 1 month, 1 week ago (July 24, 2025, 8:19 a.m.) |
Issued | 26 years, 8 months ago (Jan. 1, 1999) |
Published | 26 years, 8 months ago (Jan. 1, 1999) |
Published Print | 26 years, 8 months ago (Jan. 1, 1999) |
@article{Woolwine_1999, title={Identification of an Escherichia coli pepA Homolog and Its Involvement in Suppression of the algB Phenotype in Mucoid Pseudomonas aeruginosa}, volume={181}, ISSN={1098-5530}, url={http://dx.doi.org/10.1128/jb.181.1.107-116.1999}, DOI={10.1128/jb.181.1.107-116.1999}, number={1}, journal={Journal of Bacteriology}, publisher={American Society for Microbiology}, author={Woolwine, Samuel C. and Wozniak, Daniel J.}, year={1999}, month=jan, pages={107–116} }