Abstract
Carbon monoxide-dependent production of H2, CO2, and CH4 was detected in crude cell extracts of acetate-grown Methanosarcina barkeri. This metabolic transformation was associated with an active methyl viologen-linked CO dehydrogenase activity (5 to 10 U/mg of protein). Carbon monoxide dehydrogenase activity was inhibited 85% by 10 microM KCN and was rapidly inactivated by O2. The enzyme was nearly homogeneous after 20-fold purification, indicating that a significant proportion of soluble cell protein was CO dehydrogenase (ca. 5%). The native purified enzyme displayed a molecular weight of 232,000 and a two-subunit composition of 92,000 and 18,000 daltons. The enzyme was shown to contain nickel by isolation of radioactive CO dehydrogenase from cells grown in 63Ni. Analysis of enzyme kinetic properties revealed an apparent Km of 5 mM for CO and a Vmax of 1,300 U/mg of protein. The spectral properties of the enzyme were similar to those published for CO dehydrogenase from acetogenic anaerobes. The physiological functions of the enzyme are discussed.
References
41
Referenced
97
- Aliamaguy P. (ed.). 1976. Encyclopedie des gaz/Gas encyclopedia. Elsevier/North-Holland Publishing Co. New York.
-
Bradford , M. M. 1976 . A rapid and sensitive method for the quantification of microgram quantities of protein utilizing the principle of protein-dye binding . Anal. Biochem. 72 : 248 - 254 .
(
10.1016/0003-2697(76)90527-3
) / Anal. Biochem. / A rapid and sensitive method for the quantification of microgram quantities of protein utilizing the principle of protein-dye binding by Bradford M. M. (1976) - Brewer J. M. A. J. Pesce and R. B. Ashworth (ed.). 1974. Experimental techniques in biochemistry. Prentice-Hall Inc. Englewood Cliffs N.J.
-
Daniels , L. , G. Fuchs , R. K. Thauer , and J. G. Zeikus . 1977 . Carbon monoxide oxidation by methanogenic bacteria . J. Bacteriol. 132 : 118 - 126 .
(
10.1128/JB.132.1.118-126.1977
) / J. Bacteriol. / Carbon monoxide oxidation by methanogenic bacteria by Daniels L. (1977) -
Diekert G. and M. Ritter. 1982. Nickel requirement of Acetobacterium woodii. J. Bacteriol. 151i1043-1045.
(
10.1128/JB.151.2.1043-1045.1982
) -
Diekert , G. , and M. Ritter . 1983 . Carbon monoxide fixation into the carboxyl group of acetate during growth of Acetobacterium woodii on H2 and CO2 . FEMS Microbiol. Lett. 17 : 299 - 302 .
(
10.1111/j.1574-6968.1983.tb00423.x
) / FEMS Microbiol. Lett. / Carbon monoxide fixation into the carboxyl group of acetate during growth of Acetobacterium woodii on H2 and CO2 by Diekert G. (1983) -
Diekert , G. , and M. Ritter . 1983 . Purification of the nickel protein carbon monoxide dehydrogenase of Clostridium thermoaceticum . FEBS Lett. 151 : 41 - 44 .
(
10.1016/0014-5793(83)80338-X
) / FEBS Lett. / Purification of the nickel protein carbon monoxide dehydrogenase of Clostridium thermoaceticum by Diekert G. (1983) -
Diekert , G. , and R. K. Thauer . 1982 . The effect of nickel on carbon monoxide dehydrogenase formation in Clostridium thermoaceticum and Clostridium formicoaceticum . FEMS Lett. 7 : 187 - 189 .
(
10.1111/j.1574-6941.1980.tb01622.x
) / FEMS Lett. / The effect of nickel on carbon monoxide dehydrogenase formation in Clostridium thermoaceticum and Clostridium formicoaceticum by Diekert G. (1982) -
Drake , H. L. , S. -I. Hu , and H. G. Wood . 1981 . Purification of carbon monoxide dehydrogenase, a nickel enzyme from Clostridium thermoaceticum . J. Biol. Chem. 255 : 7174 - 7180 .
(
10.1016/S0021-9258(20)79682-1
) / J. Biol. Chem. / Purification of carbon monoxide dehydrogenase, a nickel enzyme from Clostridium thermoaceticum by Drake H. L. (1981) -
Drake , H. L. , S. -I. Hu , and H. G. Wood . 1981 . Purificiation of five components from Clostridium thermoaceticum which catalyzed synthesis of acetate from pyruvate and methyltetrahydrofolate: properties of phosphotransacetylase . J. Biol. Chem. 256 : 11137 - 11144 .
(
10.1016/S0021-9258(19)68568-6
) / J. Biol. Chem. / Purificiation of five components from Clostridium thermoaceticum which catalyzed synthesis of acetate from pyruvate and methyltetrahydrofolate: properties of phosphotransacetylase by Drake H. L. (1981) -
Eliefsop , W. L. , and R. S. Wolfe . 1981 . Component C of the methylreductase system of Methanobacterium . J. Biol. Chem. 256 : 4259 - 4262 .
(
10.1016/S0021-9258(19)69427-5
) / J. Biol. Chem. / Component C of the methylreductase system of Methanobacterium by Eliefsop W. L. (1981) - Fischer , F. , R. Lieske , and W. Winzer . 1931 . Biologishe Gasreaktioner . I. Die Umsetzungen des Kohlenoxyds. Biochem. Z. 236 : 247 - 267 . / I. Die Umsetzungen des Kohlenoxyds. Biochem. Z. / Biologishe Gasreaktioner by Fischer F. (1931)
-
Fuchs , G. , and E. Stupperich . 1980 . Acetyl CoA, a central intermediate of autotrophic CO2 fixation in Methanobacterium thermoautotrophicum . Arch. Microbiol. 127 : 267 - 272 .
(
10.1007/BF00427203
) / Arch. Microbiol. / Acetyl CoA, a central intermediate of autotrophic CO2 fixation in Methanobacterium thermoautotrophicum by Fuchs G. (1980) -
Fuchs , G. , E. Stupperich , and R. K. Thauer . 1978 . Acetate assimilation and the synthesis of alanine, aspartate and glutamate in Methanobacterium thermoautotrophicum . Arch. Microbiol. 117 : 61 - 66 .
(
10.1007/BF00689352
) / Arch. Microbiol. / Acetate assimilation and the synthesis of alanine, aspartate and glutamate in Methanobacterium thermoautotrophicum by Fuchs G. (1978) -
Graf , E. - G. , and R. K. Thauer . 1981 . Hydrogenase from Methanobacterium thermoautotrophicum, a nickel-containing enzyme . FEBS Lett. 136 : 165 - 169 .
(
10.1016/0014-5793(81)81238-0
) / FEBS Lett. / Hydrogenase from Methanobacterium thermoautotrophicum, a nickel-containing enzyme by Graf E. (1981) -
Hegeman , G. 1980 . Oxidation of carbon monoxide by bacteria . Trends Biochem. Sci. 5 : 256 - 259 .
(
10.1016/0968-0004(80)90030-4
) / Trends Biochem. Sci. / Oxidation of carbon monoxide by bacteria by Hegeman G. (1980) -
Hu , S. - I. , H. L. Drake , and H. G. Wood . 1982 . Synthesis of acetyl coenzyme A from carbon monoxide, methyltetrahydrofolate, and coenzyme A by enzymes from Clostridium thermoaceticum . J. Bacteriol. 149 : 440 - 448 .
(
10.1128/JB.149.2.440-448.1982
) / J. Bacteriol. / Synthesis of acetyl coenzyme A from carbon monoxide, methyltetrahydrofolate, and coenzyme A by enzymes from Clostridium thermoaceticum by Hu S. (1982) -
Jacobson , F. S. , L. Dqniels , J. A. Fox , C. Walsh , and W. H. Orme-Johnson . 1982 . Purification and properties of an 8-hydroxy-5-deazaflavin-reducing hydrogenase from Methanobacterium thermoautotrophicum . J. Biol. Chem. 257 : 3385 - 3388 .
(
10.1016/S0021-9258(18)34788-4
) / J. Biol. Chem. / Purification and properties of an 8-hydroxy-5-deazaflavin-reducing hydrogenase from Methanobacterium thermoautotrophicum by Jacobson F. S. (1982) -
Keltjens , J. T. , W. B. Whitman , C. G. Caerteling , A. M. Van Kooten , R. S. Wolfe , and G. D. Vogels . 1982 . Presence of coenzyme M derivatives in the prostetic group (coenzyme MF430) of methylcoenzyme M reductase fr,om Methanobacterium thermoautotrophicum . Biochem. Biophys. Res. Commun. 108 : 495 - 503 .
(
10.1016/0006-291X(82)90856-7
) / Biochem. Biophys. Res. Commun. / Presence of coenzyme M derivatives in the prostetic group (coenzyme MF430) of methylcoenzyme M reductase fr,om Methanobacterium thermoautotrophicum by Keltjens J. T. (1982) -
Kenealy , W. , and J. G. Zeikus . 1981 . Influence of corrinoid antagonists on methanogen metabolism . J. Bacteriol. 146 : 133 - 140 .
(
10.1128/jb.146.1.133-140.1981
) / J. Bacteriol. / Influence of corrinoid antagonists on methanogen metabolism by Kenealy W. (1981) -
Kenealy , W. R. , T. E. Thompson , K. R. Schubert , and J. G. Zeikus . 1982 . Ammonia assimilation and synthesis of alanine, aspartate, and glutamate in Methanosarcina barkeri and Methanobacterium thermoautotrophicum . J. Bacteriol. 150 : 1357 - 1365 .
(
10.1128/jb.150.3.1357-1365.1982
) / J. Bacteriol. / Ammonia assimilation and synthesis of alanine, aspartate, and glutamate in Methanosarcina barkeri and Methanobacterium thermoautotrophicum by Kenealy W. R. (1982) -
Kenealy , W. R. , and J.G. Zeikus . 1982 . One-carbon metabolism in methanogens: evidence for synthesis of a two-carbon cellular intermediate and unification of catabolism and anabolism in Methanosarcina barkeri . J. Bacteriol. 151 : 932 - 941 .
(
10.1128/JB.151.2.932-941.1982
) / J. Bacteriol. / One-carbon metabolism in methanogens: evidence for synthesis of a two-carbon cellular intermediate and unification of catabolism and anabolism in Methanosarcina barkeri by Kenealy W. R. (1982) -
Kerby , R. , W. Niemczura , and J. G. Zeikus . 1983 . Single-carbon catabolism in acetogens: analysis of carbon flow in Acetobacterium woodii and Butyribacterium methylotrqphicum by fermentation and 13C nuclear magnetic resonance measurement . J. Bacteriol. 155 : 1208 - 1218 .
(
10.1128/JB.155.3.1208-1218.1983
) / J. Bacteriol. / Single-carbon catabolism in acetogens: analysis of carbon flow in Acetobacterium woodii and Butyribacterium methylotrqphicum by fermentation and 13C nuclear magnetic resonance measurement by Kerby R. (1983) -
Kim , Y. M. , and G. D. Hegeman . 1981 . Purification and some properties of carbon monoxide dehydrogenase from Pseudomonas carboxydohydrogena . J. Bacteriol. 148 : 904 - 911 .
(
10.1128/jb.148.3.904-911.1981
) / J. Bacteriol. / Purification and some properties of carbon monoxide dehydrogenase from Pseudomonas carboxydohydrogena by Kim Y. M. (1981) -
Kim , Y. M. , and G. D. Hegeman . 1983 . Oxidation of carbon monoxide by bacteria . Int. Rev. Cytol. 81 : 1 - 28 .
(
10.1016/S0074-7696(08)62333-5
) / Int. Rev. Cytol. / Oxidation of carbon monoxide by bacteria by Kim Y. M. (1983) - Kluyver , A. J. , and W. G. T. P. Schnellen . 1947 . On the fermentation of carbon monoxide by pure cultures of methane bacteria . Arch. Biochem. 14 : 57 - 70 . / Arch. Biochem. / On the fermentation of carbon monoxide by pure cultures of methane bacteria by Kluyver A. J. (1947)
-
Krzycki , J. A. , R. H. Wolkin , and J. G. Zeikus . 1982 . Comparison of unitrophic and mixotrophic substrate metabolism by an acetate-adapted strain of Methanosarcina ba-keri . J. Bacteriol. 149 : 247 - 254 .
(
10.1128/JB.149.1.247-254.1982
) / J. Bacteriol. / Comparison of unitrophic and mixotrophic substrate metabolism by an acetate-adapted strain of Methanosarcina ba-keri by Krzycki J. A. (1982) -
Laemmli , U. K. 1970 . Cleavage of structural proteins during assembly of the head of bacteriophage T4 . Nature (London) 227 : 680 - 685 .
(
10.1038/227680a0
) / Nature (London) / Cleavage of structural proteins during assembly of the head of bacteriophage T4 by Laemmli U. K. (1970) -
Meyer , O. , and H. -G. Schlegel . 1980 . Carbon monoxike: methylene blue oxidoreductase from Pseudomonas carboxydovorans . J. Bacteriol. 141 : 74 - 80 .
(
10.1128/JB.141.1.74-80.1980
) / J. Bacteriol. / Carbon monoxike: methylene blue oxidoreductase from Pseudomonas carboxydovorans by Meyer O. (1980) -
O'Brien , J. M. , R. H. Wolkin , T. T. Moench , J. B. Morgan , and J. G. Zeikus . 1984 . Association Qf hydrogen metabolism' with unitrophic 'or mixotrophic growth of Methanosarcina barkeri on carbon monoxide . J. Bacteriol. 158 : 373 - 375 .
(
10.1128/JB.158.1.373-375.1984
) / J. Bacteriol. / Association Qf hydrogen metabolism' with unitrophic 'or mixotrophic growth of Methanosarcina barkeri on carbon monoxide by O'Brien J. M. (1984) -
Ragsdale , S. W. , J. E. Clark , L. G. Ljungdahl , L. L. Lundie , and H. L. Drake . 1983 . Properties of purified carbon monoxide dehydrogenase from Clostridium thermoaceticum, a nickel, iron-sulfur protein . J. Biol. Chem. 258 : 2364 - 2369 .
(
10.1016/S0021-9258(18)32932-6
) / J. Biol. Chem. / Properties of purified carbon monoxide dehydrogenase from Clostridium thermoaceticum, a nickel, iron-sulfur protein by Ragsdale S. W. (1983) -
Ragsdale , S. W. , L. G. Ljungdahl , and D. V. DerVartanian . 1983 . Isolation of carbon monoxide dehydrogenase from Acetobacterium woodii and comparison of its properties with those of the Clostridium thermoaceticum enzyme . J. Bacteriol. 155 : 1224 - 1237 .
(
10.1128/JB.155.3.1224-1237.1983
) / J. Bacteriol. / Isolation of carbon monoxide dehydrogenase from Acetobacterium woodii and comparison of its properties with those of the Clostridium thermoaceticum enzyme by Ragsdale S. W. (1983) -
Stupperich , E. , and G. Fuchs . 1983 . Autotrophic and acetyl coenzyme A'synthesis in vitro from two CO2 in Methanobacterium . FEBS Lett. 156 : 345 - 348 .
(
10.1016/0014-5793(83)80526-2
) / FEBS Lett. / Autotrophic and acetyl coenzyme A'synthesis in vitro from two CO2 in Methanobacterium by Stupperich E. (1983) -
Stupperich E. K. E. Hammel G. Fuchs and R. K. Thauer. 1983. Carbon monoxide fixation into the carboxyl group of acetyl coenzyme A during autotrophic growth of Methanobacterium. FEBS Lett.'152:21-23.
(
10.1016/0014-5793(83)80473-6
) -
Uffen , R. L. 1976 . Anaerobic growth of a Rhodopseudomonas species in the dark with carbon monoxide as sole carbon and energy substrate . Proc. Natl. Acad. Sci. U.S.A. 73 : 3298 - 3302 .
(
10.1073/pnas.73.9.3298
) / Proc. Natl. Acad. Sci. U.S.A. / Anaerobic growth of a Rhodopseudomonas species in the dark with carbon monoxide as sole carbon and energy substrate by Uffen R. L. (1976) -
Uffen , R. L. 1981 . Metabolism of carbon monoxide . Enzyme Microb. Technol. 3 : 197 - 206 .
(
10.1016/0141-0229(81)90086-7
) / Enzyme Microb. Technol. / Metabolism of carbon monoxide by Uffen R. L. (1981) -
Uffen , R. L. 1983 . Metabolism of carbon monoxide by Rhodopseudomonas gelatinosa: cell growth and properties of the oxidation system . J. Bacteriol. 155 : 956 - 965 .
(
10.1128/JB.155.3.956-965.1983
) / J. Bacteriol. / Metabolism of carbon monoxide by Rhodopseudomonas gelatinosa: cell growth and properties of the oxidation system by Uffen R. L. (1983) -
Wakin , B. T. , and R. L. Uffen . 1983 . Membrane association of the carbon monoxide oxidation system in Rhodopseudomonas gelatinosa . J. Bacteriol. 153 : 571 - 573 .
(
10.1128/JB.153.1.571-573.1983
) / J. Bacteriol. / Membrane association of the carbon monoxide oxidation system in Rhodopseudomonas gelatinosa by Wakin B. T. (1983) -
Weimer , P. J. , and J. G. Zeikus . 1978 . One carbon metabolism in methanogenic bacteria: cellular characterization and growth of Methanosarcina barkeri . Arch. Microbiol. 119 : 175 - 182 .
(
10.1007/BF00407927
) / Arch. Microbiol. / One carbon metabolism in methanogenic bacteria: cellular characterization and growth of Methanosarcina barkeri by Weimer P. J. (1978) -
Weimer , P. J. , and J. G. Zeikus . 1979 . Acetate assimilation pathway of Methanosarcina barkeri . J. Bacteriol. 137 : 332 - 339 .
(
10.1128/JB.137.1.332-339.1979
) / J. Bacteriol. / Acetate assimilation pathway of Methanosarcina barkeri by Weimer P. J. (1979) -
Zeikus , J. G. 1983 . Metabolism of one carbon compounds by chemotrophic anaerobes . Adv. Microb. Physiol. 24 : 215 - 299 .
(
10.1016/S0065-2911(08)60387-2
) / Adv. Microb. Physiol. / Metabolism of one carbon compounds by chemotrophic anaerobes by Zeikus J. G. (1983)
Dates
Type | When |
---|---|
Created | 5 years, 8 months ago (Jan. 3, 2020, 12:56 p.m.) |
Deposited | 4 years, 1 month ago (July 29, 2021, 1:34 p.m.) |
Indexed | 1 year, 7 months ago (Jan. 14, 2024, 4:31 a.m.) |
Issued | 41 years, 5 months ago (April 1, 1984) |
Published | 41 years, 5 months ago (April 1, 1984) |
Published Print | 41 years, 5 months ago (April 1, 1984) |
@article{Krzycki_1984, title={Characterization and purification of carbon monoxide dehydrogenase from Methanosarcina barkeri}, volume={158}, ISSN={1098-5530}, url={http://dx.doi.org/10.1128/jb.158.1.231-237.1984}, DOI={10.1128/jb.158.1.231-237.1984}, number={1}, journal={Journal of Bacteriology}, publisher={American Society for Microbiology}, author={Krzycki, J A and Zeikus, J G}, year={1984}, month=apr, pages={231–237} }