Crossref journal-article
American Society for Microbiology
Applied and Environmental Microbiology (235)
Abstract

ABSTRACT Viable microbes have been detected beneath several geographically distant glaciers underlain by different lithologies, but comparisons of their microbial communities have not previously been made. This study compared the microbial community compositions of samples from two glaciers overlying differing bedrock. Bulk meltwater chemistry indicates that sulfide oxidation and carbonate dissolution account for 90% of the solute flux from Bench Glacier, Alaska, whereas gypsum/anhydrite and carbonate dissolution accounts for the majority of the flux from John Evans Glacier, Ellesmere Island, Nunavut, Canada. The microbial communities were examined using two techniques: clone libraries and dot blot hybridization of 16S rRNA genes. Two hundred twenty-seven clones containing amplified 16S rRNA genes were prepared from subglacial samples, and the gene sequences were analyzed phylogenetically. Although some phylogenetic groups, including the Betaproteobacteria , were abundant in clone libraries from both glaciers, other well-represented groups were found at only one glacier. Group-specific oligonucleotide probes were developed for two phylogenetic clusters that were of particular interest because of their abundance or inferred biochemical capabilities. These probes were used in quantitative dot blot hybridization assays with a range of samples from the two glaciers. In addition to shared phyla at both glaciers, each glacier also harbored a subglacial microbial population that correlated with the observed aqueous geochemistry. These results are consistent with the hypothesis that microbial activity is an important contributor to the solute flux from glaciers.

Bibliography

Skidmore, M., Anderson, S. P., Sharp, M., Foght, J., & Lanoil, B. D. (2005). Comparison of Microbial Community Compositions of Two Subglacial Environments Reveals a Possible Role for Microbes in Chemical Weathering Processes. Applied and Environmental Microbiology, 71(11), 6986–6997.

Authors 5
  1. Mark Skidmore (first)
  2. Suzanne P. Anderson (additional)
  3. Martin Sharp (additional)
  4. Julia Foght (additional)
  5. Brian D. Lanoil (additional)
References 66 Referenced 214
  1. 10.1128/jb.172.2.762-770.1990
  2. 10.1128/mr.59.1.143-169.1995
  3. Anderson, R. S., S. P. Anderson, K. C. MacGregor, E. D. Waddington, S. O'Neel, C. Riihimaki, and M. G. Loso. 2004. Strong feedbacks between hydrology and sliding of a small alpine glacier. J. Geophys. Res.109:10.1029/2004JF000120. / J. Geophys. Res. (2004)
  4. 10.1016/S0016-7037(99)00358-0
  5. Barker J. D. M. J. Sharp and R. J. Turner. Organic carbon abundance and dynamics in glacier systems. Submitted for publication.
  6. Bhatia M. 2004. Molecular characterization of bacterial communities associated with a high Arctic polythermal glacier. M.Sc. thesis. University of Alberta Edmonton Alberta Canada.
  7. 10.1002/hyp.1012
  8. 10.1130/0091-7613(2003)031<0231:EOMCMW>2.0.CO;2
  9. 10.1128/AEM.68.12.6435-6438.2002
  10. 10.1098/rstb.1994.0091
  11. 10.3189/172756501781832377
  12. 10.1073/pnas.89.12.5685
  13. 10.1016/S0012-8252(98)00034-8
  14. 10.1007/s00248-003-1036-5
  15. 10.1089/ast.2004.4.327
  16. 10.1029/94PA01009
  17. Giovannoni, S. J. 1991. The polymerase chain reaction, p. 177-201. In E. Stackebrandt and M. Goodfellow (ed.), Sequencing and hybridization techniques in bacterial systematics. John Wiley & Sons, New York, N.Y. / Sequencing and hybridization techniques in bacterial systematics (1991)
  18. 10.1128/AEM.66.11.5053-5065.2000
  19. 10.1128/aem.62.4.1171-1177.1996
  20. Gordon, D. A., J. C. Priscu, and S. J. Giovannoni. 2000. Origin and phylogeny of microbes living in permanent Antarctic lake ice. Microb. Ecol.39:197-202. / Microb. Ecol. (2000)
  21. 10.1099/00221287-139-7-1531
  22. 10.1029/2000JB900440
  23. Heppenstall K. 2002. Chemical weathering in a glaciated carbonate catchment Canadian High Arctic: implications for subglacial hydrology. M.Sc. thesis. University of Alberta Edmonton Alberta Canada.
  24. 10.1126/science.281.5381.1342
  25. 10.1016/S0277-3791(97)00031-0
  26. 10.1128/AEM.67.10.4399-4406.2001
  27. 10.1099/00207713-46-3-822
  28. 10.1126/science.286.5447.2144
  29. 10.1016/S0168-6496(03)00257-5
  30. Kerr J. W. 1972. Map 1358A geology: Dobbin Bay District of Franklin. Geological Survey of Canada Ottawa Canada. (10.4095/109142)
  31. 10.1128/aem.44.2.376-382.1982
  32. 10.1111/j.1574-6941.2002.tb00910.x
  33. 10.1657/1523-0430(2004)036[0156:TCAFOD]2.0.CO;2
  34. 10.1016/S0168-6496(97)00032-9
  35. 10.1128/AEM.67.11.5143-5153.2001
  36. 10.1111/j.1574-6976.1994.tb00082.x
  37. 10.1111/j.1574-6968.1996.tb08517.x
  38. 10.1093/nar/gkh293
  39. MacGregor K. R. 2002. Modeling and field constraints on glacier dynamics erosion and alpine landscape evolution. Ph.D. thesis. University of California Santa Cruz.
  40. 10.1007/s002030000140
  41. 10.1139/t01-028
  42. 10.1128/AEM.65.12.5493-5499.1999
  43. Nealson, K. H., and D. A. Stahl. 1997. Microorganisms and biogeochemical cycles: what can we learn from layered microbial communities?, p. 5-34. In K. H. Nealson and J. F. Banfield (ed.), Geomicrobiology: interactions between microbes and minerals,vol. 35. Mineralogical Society of America, Washington, D.C. / Geomicrobiology: interactions between microbes and minerals (1997)
  44. Nemergut D. R. S. P. Anderson C. C. Cleveland A. P. Martin A. E. Miller A. Seimon and S. K. Schmidt. Microbial community succession in unvegetated recently-deglaciated soils. Submitted for publication.
  45. Nordstrom, D. K., and G. Southam. 1997. Geomicrobiology of sulfide mineral oxidation, p. 361-390. In K. H. Nealson and J. Banfield (ed.), Geomicrobiology: interactions between microbes and minerals,vol. 35. Mineralogical Society of America, Washington, D.C. / Geomicrobiology: interactions between microbes and minerals (1997)
  46. 10.1128/AEM.64.10.3724-3730.1998
  47. 10.4319/lo.1980.25.5.0943
  48. 10.1073/pnas.0400522101
  49. 10.1126/science.286.5447.2141
  50. Priscu, J. C., and B. C. Christner. 2003. Earth's icy biosphere, p. 130-145. In A. Bull. (ed.), Microbial diversity and bioprospecting. ASM Press, Washington, D.C. / Microbial diversity and bioprospecting (2003)
  51. 10.1130/0091-7613(1999)027<0107:WBPAGB>2.3.CO;2
  52. 10.1128/AEM.69.4.2153-2160.2003
  53. Skidmore M. L. 2001. Hydrology microbiology and carbon cycling in a high Arctic glacial environment. Ph.D. thesis. University of Alberta Edmonton Alberta Canada.
  54. 10.1128/AEM.66.8.3214-3220.2000
  55. 10.3189/172756499781821922
  56. 10.1099/00207713-44-4-846
  57. Suzuki, M., and S. Giovannoni. 1995. Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl. Environ. Microbiol.62:625-630. / Appl. Environ. Microbiol. (1995)
  58. 10.1080/10408410091154174
  59. Tranter, M., G. H. Brown, A. Hodson, A. Gurnell, and M. Sharp. 1994. Variations in the nitrate concentration of glacial runoff in alpine and arctic polar environments. Int. Assoc. Hydrol. Sci. Publ.223:299-310. / Int. Assoc. Hydrol. Sci. Publ. (1994)
  60. 10.1002/hyp.309
  61. 10.1002/hyp.5854
  62. 10.1038/320156a0
  63. 10.1016/S0012-821X(03)00683-6
  64. 10.1016/S0723-2020(00)80051-X
  65. Winkler G. R. M. L. Silberman A. Grantz R. J. Miller and E. M. MacKevett Jr. 1981. Geologic map and summary geochronology of the Valdez quadrangle southern Alaska. Open file report 80-892-A. U.S. Geological Survey Reston Va. (10.3133/ofr80892A)
  66. 10.3354/ame028141
Dates
Type When
Created 19 years, 9 months ago (Nov. 3, 2005, 5:08 p.m.)
Deposited 3 years, 6 months ago (Feb. 23, 2022, 10:32 a.m.)
Indexed 4 weeks ago (July 26, 2025, 5:34 a.m.)
Issued 19 years, 9 months ago (Nov. 1, 2005)
Published 19 years, 9 months ago (Nov. 1, 2005)
Published Print 19 years, 9 months ago (Nov. 1, 2005)
Funders 0

None

@article{Skidmore_2005, title={Comparison of Microbial Community Compositions of Two Subglacial Environments Reveals a Possible Role for Microbes in Chemical Weathering Processes}, volume={71}, ISSN={1098-5336}, url={http://dx.doi.org/10.1128/aem.71.11.6986-6997.2005}, DOI={10.1128/aem.71.11.6986-6997.2005}, number={11}, journal={Applied and Environmental Microbiology}, publisher={American Society for Microbiology}, author={Skidmore, Mark and Anderson, Suzanne P. and Sharp, Martin and Foght, Julia and Lanoil, Brian D.}, year={2005}, month=nov, pages={6986–6997} }