Crossref journal-article
American Association for the Advancement of Science (AAAS)
Science (221)
Abstract

Plants and filamentous fungi share with mammals enzymes responsible for DNA methylation. In these organisms, DNA methylation is associated with gene silencing and transposon control. However, plants and fungi differ from mammals in the genomic distribution, sequence specificity, and heritability of methylation. We consider the role that transposons play in establishing methylation patterns and the epigenetic consequences of their perturbation.

Bibliography

Martienssen, R. A., & Colot, V. (2001). DNA Methylation and Epigenetic Inheritance in Plants and Filamentous Fungi. Science, 293(5532), 1070–1074.

Authors 2
  1. Robert A. Martienssen (first)
  2. Vincent Colot (additional)
References 97 Referenced 388
  1. Wolffe A. P., Matzke M. A., Science 286, 481 (1999). (10.1126/science.286.5439.481) / Science by Wolffe A. P. (1999)
  2. P. D. Rabinowicz et al. Nature Genet. 23 305 (1999). (10.1038/15479)
  3. Colot V., Rossignol J. L., Bioessays 21, 402 (1999). (10.1002/(SICI)1521-1878(199905)21:5<402::AID-BIES7>3.0.CO;2-B) / Bioessays by Colot V. (1999)
  4. 10.1016/S0168-9525(97)01181-5
  5. International Human Genome Sequencing Consortium Nature 409 860 (2001).
  6. N. V. Fedoroff in Mobile DNA D. Berg M. Howe Eds. (American Society for Microbiology Washington DC 1989) pp. 375–411.
  7. Barkan A., Martienssen R. A., Proc. Natl. Acad. Sci. U.S.A. 88, 3502 (1991). (10.1073/pnas.88.8.3502) / Proc. Natl. Acad. Sci. U.S.A. by Barkan A. (1991)
  8. Settles A. M., Baron A., Barkan A., Martienssen R. A., Genetics 157, 349 (2001). (10.1093/genetics/157.1.349) / Genetics by Settles A. M. (2001)
  9. Cambareri E. B., Foss H. M., Rountree M. R., Selker E. U., Kinsey J. A., Genetics 143, 137 (1996). (10.1093/genetics/143.1.137) / Genetics by Cambareri E. B. (1996)
  10. Morgan H. D., Sutherland H. G., Martin D. I., Whitelaw E., Nature Genet. 23, 314 (1999). (10.1038/15490) / Nature Genet. by Morgan H. D. (1999)
  11. D. Berg M. Howe Eds. Mobile DNA (American Society for Microbiology Washington DC 1989).
  12. T. Belenkaya et al. Mol. Gen. Genet. 259 79 (1998). (10.1007/s004380050791)
  13. Kiger A. A., Gigliotti S., Fuller M. T., Genetics 153, 799 (1999). (10.1093/genetics/153.2.799) / Genetics by Kiger A. A. (1999)
  14. Martienssen R., Trends Genet. 14, 263 (1998). (10.1016/S0168-9525(98)01518-2) / Trends Genet. by Martienssen R. (1998)
  15. Chandler V. L., Eggleston W. B., Dorweiler J. E., Plant Mol. Biol. 43, 121 (2000). (10.1023/A:1006499808317) / Plant Mol. Biol. by Chandler V. L. (2000)
  16. Schwartz D., Maize Genet. Coop. Newsl. 63, 42 (1989). / Maize Genet. Coop. Newsl. by Schwartz D. (1989)
  17. Martienssen R., Curr. Biol. 6, 810 (1996). (10.1016/S0960-9822(02)00601-2) / Curr. Biol. by Martienssen R. (1996)
  18. Matzke M., Matzke A., Eggleston W. B., Trends Plant Sci. 1, 5586 (1996). (10.1016/S1360-1385(96)80313-X) / Trends Plant Sci. by Matzke M. (1996)
  19. J. E. Dorweiler et al. Plant Cell 12 2101 (2000). (10.2307/3871108)
  20. Matzke M. A., Mette M. F., Matzke A. J., Plant Mol. Biol. 43, 401 (2000). (10.1023/A:1006484806925) / Plant Mol. Biol. by Matzke M. A. (2000)
  21. 10.1126/science.277.5329.1100
  22. Melquist S., Luff B., Bender J., Genetics 153, 401 (1999). (10.1093/genetics/153.1.401) / Genetics by Melquist S. (1999)
  23. Luff B., Pawlowski L., Bender J., Mol. Cell 3, 505 (1999). (10.1016/S1097-2765(00)80478-5) / Mol. Cell by Luff B. (1999)
  24. Selker E. U., Trends Genet. 13, 296 (1997). (10.1016/S0168-9525(97)01201-8) / Trends Genet. by Selker E. U. (1997)
  25. Rossignol J. L., Faugeron G., Experientia 50, 307 (1994). (10.1007/BF01924014) / Experientia by Rossignol J. L. (1994)
  26. Rhounim L., Rossignol J. L., Faugeron G., EMBO J. 11, 4451 (1992). (10.1002/j.1460-2075.1992.tb05546.x) / EMBO J. by Rhounim L. (1992)
  27. Irelan J. T., Selker E. U., Genetics 146, 509 (1997). (10.1093/genetics/146.2.509) / Genetics by Irelan J. T. (1997)
  28. Barry C., Faugeron G., Rossignol J. L., Proc. Natl. Acad. Sci. U.S.A. 90, 4557 (1993). (10.1073/pnas.90.10.4557) / Proc. Natl. Acad. Sci. U.S.A. by Barry C. (1993)
  29. Rountree M. R., Selker E. U., Genes Dev. 11, 2383 (1997). (10.1101/gad.11.18.2383) / Genes Dev. by Rountree M. R. (1997)
  30. Miao V. P., Freitag M., Selker E. U., J. Mol. Biol. 300, 249 (2000). (10.1006/jmbi.2000.3864) / J. Mol. Biol. by Miao V. P. (2000)
  31. Colot V., Maloisel L., Rossignol J. L., Cell 86, 855 (1996). (10.1016/S0092-8674(00)80161-0) / Cell by Colot V. (1996)
  32. Goyon C., Rossignol J. L., Faugeron G., Nucleic Acids Res. 24, 3348 (1996). (10.1093/nar/24.17.3348) / Nucleic Acids Res. by Goyon C. (1996)
  33. 10.1093/hmg/9.16.2395
  34. Malagnac F., Gregoire A., Goyon C., Rossignol J. L., Faugeron G., Mol. Microbiol. 31, 331 (1999). (10.1046/j.1365-2958.1999.01177.x) / Mol. Microbiol. by Malagnac F. (1999)
  35. F. Malagnac et al. Cell 91 281 (1997). (10.1016/S0092-8674(00)80410-9)
  36. E. Kouzminova E. U. Selker EMBO J. in press.
  37. The Arabidopsis Genome Initiative Nature 408 796 (2000). (10.1038/35048692)
  38. 10.1023/A:1006427226972
  39. 10.1073/pnas.93.16.8449
  40. 10.1126/science.273.5275.654
  41. 10.1126/science.8316832
  42. E. Richards personal communication.
  43. 10.1093/genetics/149.1.307
  44. A. M. Lindroth et al. Science 292 2077 (2001). (10.1126/science.1059745)
  45. Bartee L., Malagnac F., Bender J., Genes Dev. 15, 1753 (2001). (10.1101/gad.905701) / Genes Dev. by Bartee L. (2001)
  46. C. M. Papa N. M. Springer M. G. Muszynski R. Meeley S. M. Kaeppler Plant Cell in press.
  47. X. Cao et al. Proc. Natl. Acad. Sci. U.S.A. 97 4979. (2000). (10.1073/pnas.97.9.4979)
  48. A. Dong et al. Nucleic Acids Res. 29 439 (2001). (10.1093/nar/29.2.439)
  49. 10.1038/8803
  50. 10.1016/S0092-8674(00)81656-6
  51. G. L. Xu et al. Nature 402 187 (1999). (10.1038/46052)
  52. 10.1016/S0960-9822(00)00324-9
  53. 10.1073/pnas.93.22.12406
  54. J. W. Soppe et al. Mol. Cell 6 791 (2000). (10.1016/S1097-2765(00)00078-2)
  55. A. Miura et al. Nature 411 212 (2001). (10.1038/35075612)
  56. 10.1101/gad.193701
  57. Amedeo P., Habu Y., Afsar K., Scheid O. M., Paszkowski J., Nature 405, 203 (2000). (10.1038/35012108) / Nature by Amedeo P. (2000)
  58. Dorer D. R., Henikoff S., Genetics 147, 1181 (1997). (10.1093/genetics/147.3.1181) / Genetics by Dorer D. R. (1997)
  59. 10.1101/SQB.1951.016.01.004
  60. CSHL/WUGSC/PEB Arabidopsis Sequencing Consortium Cell 100 377 (2000).
  61. Mittelsten-Scheid O., Afsar K., Pazkowski J., Proc. Natl. Acad. Sci. U.S.A. 95, 632 (1998). (10.1073/pnas.95.2.632) / Proc. Natl. Acad. Sci. U.S.A. by Mittelsten-Scheid O. (1998)
  62. 10.1016/S0960-9822(00)00862-9
  63. Furner I. J., Sheikh M. A., Collett C. E., Genetics 149, 651 (1998). (10.1093/genetics/149.2.651) / Genetics by Furner I. J. (1998)
  64. 10.1101/gad.12.11.1714
  65. Bartee L., Bender J., Nucleic Acids Res. 29, 2127 (2001). (10.1093/nar/29.10.2127) / Nucleic Acids Res. by Bartee L. (2001)
  66. 10.1038/74542
  67. 10.1038/35030169
  68. Finnegan E. J., Wang M., Waterhouse P., Curr. Biol. 11, R99 (2001). (10.1016/S0960-9822(01)00039-2) / Curr. Biol. by Finnegan E. J. (2001)
  69. Habu Y., Kakutani T., Paszkowski J., Curr. Opin. Genet. Dev. 11, 215 (2001). (10.1016/S0959-437X(00)00182-9) / Curr. Opin. Genet. Dev. by Habu Y. (2001)
  70. 10.1023/A:1006479327881
  71. 10.1126/science.1063051
  72. Bender J., Trends Biochem. Sci. 23, 252 (1998). (10.1016/S0968-0004(98)01225-0) / Trends Biochem. Sci. by Bender J. (1998)
  73. 10.1016/S0092-8674(00)80725-4
  74. Raizada M. N., Benito M. I., Walbot V., Plant J. 25, 79 (2001). (10.1111/j.1365-313X.2001.00939.x) / Plant J. by Raizada M. N. (2001)
  75. 10.1016/S0092-8674(00)81645-1
  76. H. Tabara et al. Cell 99 123 (1999). (10.1016/S0092-8674(00)81644-X)
  77. B. H. Ramsahoye et al. Proc. Natl. Acad. Sci. U.S.A. 97 5237 (2000). (10.1073/pnas.97.10.5237)
  78. Svoboda P., Stein P., Hayashi H., Schultz R. M., Development 127, 4147 (2000). (10.1242/dev.127.19.4147) / Development by Svoboda P. (2000)
  79. C. Cogoni et al. EMBO J. 15 3153 (1996). (10.1002/j.1460-2075.1996.tb00678.x)
  80. Faugeron G., Curr. Opin. Microbiol. 3, 144 (2000). (10.1016/S1369-5274(00)00066-7) / Curr. Opin. Microbiol. by Faugeron G. (2000)
  81. L. Jackson-Grusby et al. Nature Genet. 27 31 (2001). (10.1038/83730)
  82. 10.1038/35003595
  83. Springer P. S., Holding D. R., Groover A., Yordan C., Martienssen R. A., Development 127, 1815 (2000). (10.1242/dev.127.9.1815) / Development by Springer P. S. (2000)
  84. J. P. Vielle-Calzada et al. Genes Dev. 13 2971 (1999). (10.1101/gad.13.22.2971)
  85. R. Vinkenoog et al. Plant Cell 12 2271 (2000). (10.2307/3871120)
  86. Adams S., Vinkenoog R., Spielman M., Dickinson H. G., Scott R. J., Development 127, 2493 (2000). (10.1242/dev.127.11.2493) / Development by Adams S. (2000)
  87. Byrne M., Timmermans M., Kidner C., Martienssen R., Curr. Opin. Plant Biol. 4, 38 (2001). (10.1016/S1369-5266(00)00133-3) / Curr. Opin. Plant Biol. by Byrne M. (2001)
  88. 10.1128/MCB.18.9.5465
  89. P. SanMiguel et al. Science 274 765 (1996). (10.1126/science.274.5288.765)
  90. Mauricio R., Nature Rev. Genet. 2, 370 (2001). (10.1038/35072085) / Nature Rev. Genet. by Mauricio R. (2001)
  91. Cubas P., Vincent C., Coen E., Nature 401, 157 (1999). (10.1038/43657) / Nature by Cubas P. (1999)
  92. Martienssen R., Curr. Opin. Genet. Dev. 8, 240 (1998). (10.1016/S0959-437X(98)80147-0) / Curr. Opin. Genet. Dev. by Martienssen R. (1998)
  93. Chen Z. J., Pikaard C. S., Genes Dev. 11, 2124 (1997). (10.1101/gad.11.16.2124) / Genes Dev. by Chen Z. J. (1997)
  94. L. Comai et al. Plant Cell 12 1551 (2000). (10.2307/3871173)
  95. Lee H. S., Chen Z. J., Proc. Natl. Acad. Sci. U.S.A. 98, 6753 (2001). (10.1073/pnas.121064698) / Proc. Natl. Acad. Sci. U.S.A. by Lee H. S. (2001)
  96. We thank E. Selker E. Richards V. Chandler S. Kaeppler S. Jacobsen and J. Bender for communicating results prior to publication two anonymous referees for suggestions for improvement and our colleagues for many interesting discussions. R.M. and V.C. receive grant support from the NSF (DBI 1057338).
  97. {newshr}Review
Dates
Type When
Created 23 years, 1 month ago (July 27, 2002, 5:39 a.m.)
Deposited 1 year, 7 months ago (Jan. 13, 2024, 3:46 a.m.)
Indexed 3 weeks, 6 days ago (Aug. 5, 2025, 8:28 a.m.)
Issued 24 years ago (Aug. 10, 2001)
Published 24 years ago (Aug. 10, 2001)
Published Print 24 years ago (Aug. 10, 2001)
Funders 0

None

@article{Martienssen_2001, title={DNA Methylation and Epigenetic Inheritance in Plants and Filamentous Fungi}, volume={293}, ISSN={1095-9203}, url={http://dx.doi.org/10.1126/science.293.5532.1070}, DOI={10.1126/science.293.5532.1070}, number={5532}, journal={Science}, publisher={American Association for the Advancement of Science (AAAS)}, author={Martienssen, Robert A. and Colot, Vincent}, year={2001}, month=aug, pages={1070–1074} }