Crossref journal-article
American Association for the Advancement of Science (AAAS)
Science (221)
Abstract

Hydrogen-deuterium exchange of 39 amide protons of Bacillus amyloliquefaciens ribonuclease (barnase) was analyzed by two-dimensional nuclear magnetic resonance in the presence of micromolar concentrations of the molecular chaperones GroEL and SecB. Both chaperones bound to native barnase under physiological conditions and catalyzed exchange of deeply buried amide protons with solvent. Such exchange required complete unfolding of barnase, which occurred in the complex with the chaperones. Subsequent collapse of unfolded barnase to the exchange-protected folding intermediate was markedly slowed in the presence of GroEL or SecB. Thus, both chaperones have the potential to correct misfolding in proteins by annealing.

Bibliography

Zahn, R., Perrett, S., Stenberg, G., & Fersht, A. R. (1996). Catalysis of Amide Proton Exchange by the Molecular Chaperones GroEL and SecB. Science, 271(5249), 642–645.

Authors 4
  1. Ralph Zahn (first)
  2. Sarah Perrett (additional)
  3. Gun Stenberg (additional)
  4. Alan R. Fersht (additional)
References 46 Referenced 118
  1. 10.1126/science.8100365
  2. BAI W. Y., PRIMARY STRUCTURE EFFECTS ON PEPTIDE GROUP HYDROGEN-EXCHANGE, PROTEINS-STRUCTURE FUNCTION AND GENETICS 17, 75 (1993). (10.1002/prot.340170110) / PROTEINS-STRUCTURE FUNCTION AND GENETICS / PRIMARY STRUCTURE EFFECTS ON PEPTIDE GROUP HYDROGEN-EXCHANGE by BAI W. Y. (1993)
  3. BRAIG K, THE CRYSTAL-STRUCTURE OF THE BACTERIAL CHAPERONIN GROEL AT 2.8-ANGSTROM, NATURE 371, 578 (1994). (10.1038/371578a0) / NATURE / THE CRYSTAL-STRUCTURE OF THE BACTERIAL CHAPERONIN GROEL AT 2.8-ANGSTROM by BRAIG K (1994)
  4. 10.1021/bi00220a020
  5. CLARKE J, LOCAL BREATHING AND GLOBAL UNFOLDING IN HYDROGEN-EXCHANGE OF BARNASE AND ITS RELATIONSHIP TO PROTEIN-FOLDING PATHWAYS, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 90, 9837 (1993). (10.1073/pnas.90.21.9837) / PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA / LOCAL BREATHING AND GLOBAL UNFOLDING IN HYDROGEN-EXCHANGE OF BARNASE AND ITS RELATIONSHIP TO PROTEIN-FOLDING PATHWAYS by CLARKE J (1993)
  6. CORRALES F unpublished data.
  7. CORRALES J. F., THE FOLDING OF GROEL-BOUND BARNASE AS A MODEL FOR CHAPERONIN-MEDIATED PROTEIN-FOLDING, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 92, 5326 (1995). (10.1073/pnas.92.12.5326) / PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA / THE FOLDING OF GROEL-BOUND BARNASE AS A MODEL FOR CHAPERONIN-MEDIATED PROTEIN-FOLDING by CORRALES J. F. (1995)
  8. CREIGHTON E. T., MOLECULAR CHAPERONES - UNFOLDING PROTEIN FOLDING, NATURE 352, 17 (1991). (10.1038/352017a0) / NATURE / MOLECULAR CHAPERONES - UNFOLDING PROTEIN FOLDING by CREIGHTON E. T. (1991)
  9. DIAMOND L. D., INTERACTION OF SECB WITH INTERMEDIATES ALONG THE FOLDING PATHWAY OF MALTOSE-BINDING PROTEIN, PROTEIN SCIENCE 4, 1118 (1995). (10.1002/pro.5560040610) / PROTEIN SCIENCE / INTERACTION OF SECB WITH INTERMEDIATES ALONG THE FOLDING PATHWAY OF MALTOSE-BINDING PROTEIN by DIAMOND L. D. (1995)
  10. ELLIS J. R., ROLES OF MOLECULAR CHAPERONES IN PROTEIN-FOLDING, CURRENT OPINION IN STRUCTURAL BIOLOGY 4, 117 (1994). (10.1016/S0959-440X(94)90069-8) / CURRENT OPINION IN STRUCTURAL BIOLOGY / ROLES OF MOLECULAR CHAPERONES IN PROTEIN-FOLDING by ELLIS J. R. (1994)
  11. FENTON A. W., RESIDUES IN CHAPERONIN GROEL REQUIRED FOR POLYPEPTIDE BINDING AND RELEASE, NATURE 371, 614 (1994). (10.1038/371614a0) / NATURE / RESIDUES IN CHAPERONIN GROEL REQUIRED FOR POLYPEPTIDE BINDING AND RELEASE by FENTON A. W. (1994)
  12. FERSHT R. A., PROTEIN-FOLDING AND STABILITY - THE PATHWAY OF FOLDING OF BARNASE, FEBS LETTERS 325, 5 (1993). (10.1016/0014-5793(93)81405-O) / FEBS LETTERS / PROTEIN-FOLDING AND STABILITY - THE PATHWAY OF FOLDING OF BARNASE by FERSHT R. A. (1993)
  13. GETHING J. M., PROTEIN FOLDING IN THE CELL, NATURE 355, 33 (1992). (10.1038/355033a0) / NATURE / PROTEIN FOLDING IN THE CELL by GETHING J. M. (1992)
  14. GLASOE K. P., USE OF GLASS ELECTRODES TO MEASURE ACIDITIES IN DEUTERIUM OXIDE, JOURNAL OF PHYSICAL CHEMISTRY 64, 188 (1960). (10.1021/j100830a521) / JOURNAL OF PHYSICAL CHEMISTRY / USE OF GLASS ELECTRODES TO MEASURE ACIDITIES IN DEUTERIUM OXIDE by GLASOE K. P. (1960)
  15. GOLOUBINOFF P, RECONSTITUTION OF ACTIVE DIMERIC RIBULOSE BISPHOSPHATE CARBOXYLASE FROM AN UNFOLDED STATE DEPENDS ON 2 CHAPERONIN PROTEINS AND MG-ATP, NATURE 342, 884 (1989). (10.1038/342884a0) / NATURE / RECONSTITUTION OF ACTIVE DIMERIC RIBULOSE BISPHOSPHATE CARBOXYLASE FROM AN UNFOLDED STATE DEPENDS ON 2 CHAPERONIN PROTEINS AND MG-ATP by GOLOUBINOFF P (1989)
  16. GRAY E. T., REFOLDING OF BARNASE MUTANTS AND PRO-BARNASE IN THE PRESENCE AND ABSENCE OF GROEL, EMBO JOURNAL 12, 4145 (1993). (10.1002/j.1460-2075.1993.tb06098.x) / EMBO JOURNAL / REFOLDING OF BARNASE MUTANTS AND PRO-BARNASE IN THE PRESENCE AND ABSENCE OF GROEL by GRAY E. T. (1993)
  17. GRAY E. T., REFOLDING OF BARNASE IN THE PRESENCE OF GROE, JOURNAL OF MOLECULAR BIOLOGY 232, 1197 (1993). (10.1006/jmbi.1993.1471) / JOURNAL OF MOLECULAR BIOLOGY / REFOLDING OF BARNASE IN THE PRESENCE OF GROE by GRAY E. T. (1993)
  18. HARTL U. F., MOLECULAR CHAPERONES IN PROTEIN-FOLDING - THE ART OF AVOIDING STICKY SITUATIONS, TRENDS IN BIOCHEMICAL SCIENCES 19, 20 (1994). (10.1016/0968-0004(94)90169-4) / TRENDS IN BIOCHEMICAL SCIENCES / MOLECULAR CHAPERONES IN PROTEIN-FOLDING - THE ART OF AVOIDING STICKY SITUATIONS by HARTL U. F. (1994)
  19. HENDRIX W. R., PURIFICATION AND PROPERTIES OF GROE, A HOST PROTEIN INVOLVED IN BACTERIOPHAGE ASSEMBLY, JOURNAL OF MOLECULAR BIOLOGY 129, 375 (1979). (10.1016/0022-2836(79)90502-3) / JOURNAL OF MOLECULAR BIOLOGY / PURIFICATION AND PROPERTIES OF GROE, A HOST PROTEIN INVOLVED IN BACTERIOPHAGE ASSEMBLY by HENDRIX W. R. (1979)
  20. HOHN T, ISOLATION AND CHARACTERIZATION OF THE HOST PROTEIN GROE INVOLVED IN BACTERIOPHAGE-LAMBDA ASSEMBLY, JOURNAL OF MOLECULAR BIOLOGY 129, 359 (1979). (10.1016/0022-2836(79)90501-1) / JOURNAL OF MOLECULAR BIOLOGY / ISOLATION AND CHARACTERIZATION OF THE HOST PROTEIN GROE INVOLVED IN BACTERIOPHAGE-LAMBDA ASSEMBLY by HOHN T (1979)
  21. HUBBARD TJP, THE ROLE OF HEAT-SHOCK AND CHAPERONE PROTEINS IN PROTEIN FOLDING - POSSIBLE MOLECULAR MECHANISMS, PROTEIN ENGINEERING 4, 711 (1991). (10.1093/protein/4.7.711) / PROTEIN ENGINEERING / THE ROLE OF HEAT-SHOCK AND CHAPERONE PROTEINS IN PROTEIN FOLDING - POSSIBLE MOLECULAR MECHANISMS by HUBBARD TJP (1991)
  22. HVIDT A, ADV PROTEIN CHEM 21, 287 (1966). (10.1016/S0065-3233(08)60129-1) / ADV PROTEIN CHEM by HVIDT A (1966)
  23. ITZHAKI S. L., NATURE AND CONSEQUENCES OF GROEL-PROTEIN INTERACTIONS, BIOCHEMISTRY 34, 14581 (1995). (10.1021/bi00044a037) / BIOCHEMISTRY / NATURE AND CONSEQUENCES OF GROEL-PROTEIN INTERACTIONS by ITZHAKI S. L. (1995)
  24. JACKSON S. G., BINDING AND HYDROLYSIS OF NUCLEOTIDES IN THE CHAPERONIN CATALYTIC CYCLE - IMPLICATIONS FOR THE MECHANISM OF ASSISTED PROTEIN FOLDING, BIOCHEMISTRY 32, 2554 (1993). (10.1021/bi00061a013) / BIOCHEMISTRY / BINDING AND HYDROLYSIS OF NUCLEOTIDES IN THE CHAPERONIN CATALYTIC CYCLE - IMPLICATIONS FOR THE MECHANISM OF ASSISTED PROTEIN FOLDING by JACKSON S. G. (1993)
  25. 10.1107/S0021889891004399
  26. LANDRY J. S., DIFFERENT CONFORMATIONS FOR THE SAME POLYPEPTIDE BOUND TO CHAPERONES DNAK AND GROEL, NATURE 355, 455 (1992). (10.1038/355455a0) / NATURE / DIFFERENT CONFORMATIONS FOR THE SAME POLYPEPTIDE BOUND TO CHAPERONES DNAK AND GROEL by LANDRY J. S. (1992)
  27. LILIE H, INTERACTION OF GROEL WITH A HIGHLY STRUCTURED FOLDING INTERMEDIATE - ITERATIVE BINDING CYCLES DO NOT INVOLVE UNFOLDING, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 92, 8100 (1995). (10.1073/pnas.92.18.8100) / PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA / INTERACTION OF GROEL WITH A HIGHLY STRUCTURED FOLDING INTERMEDIATE - ITERATIVE BINDING CYCLES DO NOT INVOLVE UNFOLDING by LILIE H (1995)
  28. MARTIN J, CHAPERONIN-MEDIATED PROTEIN FOLDING AT THE SURFACE OF GROEL THROUGH A MOLTEN GLOBULE-LIKE INTERMEDIATE, NATURE 352, 36 (1991). (10.1038/352036a0) / NATURE / CHAPERONIN-MEDIATED PROTEIN FOLDING AT THE SURFACE OF GROEL THROUGH A MOLTEN GLOBULE-LIKE INTERMEDIATE by MARTIN J (1991)
  29. PERRETT S, RELATIONSHIP BETWEEN EQUILIBRIUM AMIDE PROTON-EXCHANGE BEHAVIOR AND THE FOLDING PATHWAY OF BARNASE, BIOCHEMISTRY 34, 9288 (1995). (10.1021/bi00029a003) / BIOCHEMISTRY / RELATIONSHIP BETWEEN EQUILIBRIUM AMIDE PROTON-EXCHANGE BEHAVIOR AND THE FOLDING PATHWAY OF BARNASE by PERRETT S (1995)
  30. PERRETT S unpublished data.
  31. RANDALL L. L., HIGH SELECTIVITY WITH LOW SPECIFICITY - HOW SECB HAS SOLVED THE PARADOX OF CHAPERONE BINDING, TRENDS IN BIOCHEMICAL SCIENCES 20, 65 (1995). (10.1016/S0968-0004(00)88959-8) / TRENDS IN BIOCHEMICAL SCIENCES / HIGH SELECTIVITY WITH LOW SPECIFICITY - HOW SECB HAS SOLVED THE PARADOX OF CHAPERONE BINDING by RANDALL L. L. (1995)
  32. RANSON A. N., CHAPERONINS CAN CATALYZE THE REVERSAL OF EARLY AGGREGATION STEPS WHEN A PROTEIN MISFOLDS, JOURNAL OF MOLECULAR BIOLOGY 250, 581 (1995). (10.1006/jmbi.1995.0399) / JOURNAL OF MOLECULAR BIOLOGY / CHAPERONINS CAN CATALYZE THE REVERSAL OF EARLY AGGREGATION STEPS WHEN A PROTEIN MISFOLDS by RANSON A. N. (1995)
  33. ROBINSON V. C., CONFORMATION OF GROEL-BOUND ALPHA-LACTALBUMIN PROBED BY MASS-SPECTROMETRY, NATURE 372, 646 (1994). (10.1038/372646a0) / NATURE / CONFORMATION OF GROEL-BOUND ALPHA-LACTALBUMIN PROBED BY MASS-SPECTROMETRY by ROBINSON V. C. (1994)
  34. RODER H, AMIDE PROTON-EXCHANGE IN PROTEINS BY EX1 KINETICS - STUDIES OF THE BASIC PANCREATIC TRYPSIN-INHIBITOR AT VARIABLE P2H AND TEMPERATURE, BIOCHEMISTRY 24, 7396 (1985). (10.1021/bi00346a055) / BIOCHEMISTRY / AMIDE PROTON-EXCHANGE IN PROTEINS BY EX1 KINETICS - STUDIES OF THE BASIC PANCREATIC TRYPSIN-INHIBITOR AT VARIABLE P2H AND TEMPERATURE by RODER H (1985)
  35. SERRANO L, ESTIMATING THE CONTRIBUTION OF ENGINEERED SURFACE ELECTROSTATIC INTERACTIONS TO PROTEIN STABILITY BY USING DOUBLE-MUTANT CYCLES, BIOCHEMISTRY 29, 9343 (1990). (10.1021/bi00492a006) / BIOCHEMISTRY / ESTIMATING THE CONTRIBUTION OF ENGINEERED SURFACE ELECTROSTATIC INTERACTIONS TO PROTEIN STABILITY BY USING DOUBLE-MUTANT CYCLES by SERRANO L (1990)
  36. STENBERG G unpublished data.
  37. 10.1126/science.7913555
  38. TOPPING B. T., PROTEIN SCI 3, 760 (1994). (10.1002/pro.5560030502) / PROTEIN SCI by TOPPING B. T. (1994)
  39. WATANABE M, CYTOSOLIC FACTOR PURIFIED FROM ESCHERICHIA-COLI IS NECESSARY AND SUFFICIENT FOR THE EXPORT OF A PREPROTEIN AND IS A HOMOTETRAMER OF SECB, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 86, 2728 (1989). (10.1073/pnas.86.8.2728) / PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA / CYTOSOLIC FACTOR PURIFIED FROM ESCHERICHIA-COLI IS NECESSARY AND SUFFICIENT FOR THE EXPORT OF A PREPROTEIN AND IS A HOMOTETRAMER OF SECB by WATANABE M (1989)
  40. WEISS B. J., PURIFIED SECB PROTEIN OF ESCHERICHIA-COLI RETARDS FOLDING AND PROMOTES MEMBRANE TRANSLOCATION OF THE MALTOSE-BINDING PROTEIN INVITRO, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 85, 8978 (1988). (10.1073/pnas.85.23.8978) / PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA / PURIFIED SECB PROTEIN OF ESCHERICHIA-COLI RETARDS FOLDING AND PROMOTES MEMBRANE TRANSLOCATION OF THE MALTOSE-BINDING PROTEIN INVITRO by WEISS B. J. (1988)
  41. WEISSMAN S. J., GROEL-MEDIATED PROTEIN-FOLDING PROCEEDS BY MULTIPLE ROUNDS OF BINDING AND RELEASE OF NONNATIVE FORMS, CELL 78, 693 (1994). (10.1016/0092-8674(94)90533-9) / CELL / GROEL-MEDIATED PROTEIN-FOLDING PROCEEDS BY MULTIPLE ROUNDS OF BINDING AND RELEASE OF NONNATIVE FORMS by WEISSMAN S. J. (1994)
  42. 10.1126/science.1716783
  43. WUTHRICH K, NMR PROTEINS NUCLEIC (1986). / NMR PROTEINS NUCLEIC by WUTHRICH K (1986)
  44. ZAHN R, GROE PREVENTS THE ACCUMULATION OF EARLY FOLDING INTERMEDIATES OF PRE-BETA-LACTAMASE WITHOUT CHANGING THE FOLDING PATHWAY, BIOCHEMISTRY 31, 3249 (1992). (10.1021/bi00127a029) / BIOCHEMISTRY / GROE PREVENTS THE ACCUMULATION OF EARLY FOLDING INTERMEDIATES OF PRE-BETA-LACTAMASE WITHOUT CHANGING THE FOLDING PATHWAY by ZAHN R (1992)
  45. ZAHN R, DESTABILIZATION OF THE COMPLETE PROTEIN SECONDARY STRUCTURE ON BINDING TO THE CHAPERONE GROEL, NATURE 368, 261 (1994). (10.1038/368261a0) / NATURE / DESTABILIZATION OF THE COMPLETE PROTEIN SECONDARY STRUCTURE ON BINDING TO THE CHAPERONE GROEL by ZAHN R (1994)
  46. ZAHN R, THESIS U MUNICH (1994). / THESIS U MUNICH by ZAHN R (1994)
Dates
Type When
Created 18 years, 10 months ago (Oct. 27, 2006, 2:30 p.m.)
Deposited 1 year, 7 months ago (Jan. 12, 2024, 6:16 p.m.)
Indexed 1 month, 3 weeks ago (July 2, 2025, 2:46 p.m.)
Issued 29 years, 6 months ago (Feb. 2, 1996)
Published 29 years, 6 months ago (Feb. 2, 1996)
Published Print 29 years, 6 months ago (Feb. 2, 1996)
Funders 0

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@article{Zahn_1996, title={Catalysis of Amide Proton Exchange by the Molecular Chaperones GroEL and SecB}, volume={271}, ISSN={1095-9203}, url={http://dx.doi.org/10.1126/science.271.5249.642}, DOI={10.1126/science.271.5249.642}, number={5249}, journal={Science}, publisher={American Association for the Advancement of Science (AAAS)}, author={Zahn, Ralph and Perrett, Sarah and Stenberg, Gun and Fersht, Alan R.}, year={1996}, month=feb, pages={642–645} }