Abstract
SummaryThe effect of distance between 18 bp direct repeats on deletion formation has been examined in Bacillus subtilis. The deletion frequency decreased exponentially by more than 1000‐fold as the distance increased from 33 to 2313 bp. This decrease occurred in two distinct phases, which may be determined by DNA‐duplex flexibility. A similar relationship between deletion formation and distance was observed in a θ‐replicating plasmid and in the chromosome, indicating that this relationship might have a general validity.
References
59
Referenced
53
10.1016/0022-2836(88)90553-0
10.1016/0092-8674(82)90148-9
10.1101/SQB.1983.047.01.096
10.1073/pnas.83.14.5199
10.1006/jmbi.1994.1002
10.1093/nar/7.6.1513
10.1007/BF00292717
10.1016/0378-1119(77)90000-2
10.1007/BF00273591
10.1002/j.1460-2075.1991.tb07752.x
10.1016/0378-1119(82)90198-6
10.1093/genetics/115.1.41
/ Genetics / Local DNA sequence control of deletion formation in Escherichia coli plasmid pBR322 by DasGupta U. (1987)10.1128/jb.171.5.2856-2865.1989
- Dervyn E.(1992)Effets sur la recombinaison illégitime de la distance et de la transcription entre des répétitions directes.Thèse Université Paris XI Orsay.
10.1073/pnas.78.1.459
{'key': 'e_1_2_1_17_1', 'first-page': '799', 'volume-title': 'Mobile DNA', 'author': 'Ehrlich S.D.', 'year': '1989'}
/ Mobile DNA by Ehrlich S.D. (1989)10.1016/0092-8674(81)90286-5
10.1073/pnas.81.2.512
10.1016/S0022-2836(83)80284-8
10.1016/0378-1119(90)90495-D
10.1007/BF00330053
10.1007/BF00538711
10.1007/BF00330201
{'key': 'e_1_2_1_25_1', 'volume-title': 'DNA Replication', 'author': 'Kornberg A.', 'year': '1992'}
/ DNA Replication by Kornberg A. (1992)10.1073/pnas.89.9.4154
10.1093/genetics/115.1.161
10.1093/genetics/135.3.631
10.1093/genetics/28.6.491
10.1007/BF00282467
{'key': 'e_1_2_1_31_1', 'first-page': '833', 'volume-title': 'Mobile DNA', 'author': 'Meuth M.', 'year': '1989'}
/ Mobile DNA by Meuth M. (1989)10.1002/j.1460-2075.1982.tb01356.x
10.1007/BF00383309
10.1016/0378-1119(82)90017-8
10.1073/pnas.85.22.8573
10.1016/0147-619X(91)90034-T
10.1007/BF00330849
10.1093/nar/19.14.3901
10.1093/nar/19.10.2693
10.1126/science.2448875
/ Science / Primerdirected enzymatic amplification of DNA with thermostable DNA polymerase by Saiki R.K. (1988)10.1007/BF00337785
{'key': 'e_1_2_1_42_1', 'volume-title': 'A Laboratory Manual', 'author': 'Sambrook J.', 'year': '1989'}
/ A Laboratory Manual by Sambrook J. (1989)10.1128/jb.173.2.869-878.1991
10.1093/genetics/112.3.441
/ Genetics / Homologous recombination in Escherichia coli dependence on substrate length and homology by Shen P. (1986)10.1016/0300-9084(88)90093-4
10.1016/0022-2836(88)90454-8
10.1093/nar/18.14.4249
10.1101/SQB.1966.031.01.014
10.1073/pnas.83.8.2541
10.1016/0092-8674(89)90584-9
10.1007/BF00383017
10.1016/0378-1119(82)90015-4
10.1002/j.1460-2075.1992.tb05447.x
10.1126/science.3281259
10.1073/pnas.82.14.4768
10.1093/genetics/121.4.651
/ Genetics / Palindromy and location of deletion endpoints in Escherichia coli by Weston‐Hafer K. (1989)10.1093/genetics/127.4.649
/ Genetics / Deletions in plasmid pBR322 — replication slippage involving leading and lagging strands by Weston‐Hafer K. (1991)10.1128/jb.173.1.315-318.1991
10.1093/genetics/127.1.21
10.1128/jb.170.7.2898-2903.1988
Dates
Type | When |
---|---|
Created | 18 years, 10 months ago (Oct. 27, 2006, 10:20 p.m.) |
Deposited | 1 year, 10 months ago (Oct. 24, 2023, 2 a.m.) |
Indexed | 4 months, 3 weeks ago (April 9, 2025, 12:46 a.m.) |
Issued | 31 years, 3 months ago (May 1, 1994) |
Published | 31 years, 3 months ago (May 1, 1994) |
Published Online | 18 years, 10 months ago (Oct. 27, 2006) |
Published Print | 31 years, 3 months ago (May 1, 1994) |
@article{Ch_din_1994, title={Frequency of deletion formation decreases exponentially with distance between short direct repeats}, volume={12}, ISSN={1365-2958}, url={http://dx.doi.org/10.1111/j.1365-2958.1994.tb01042.x}, DOI={10.1111/j.1365-2958.1994.tb01042.x}, number={4}, journal={Molecular Microbiology}, publisher={Wiley}, author={Chédin, F. and Dervyn, E. and Dervyn, R. and Ehrlich, S. D. and Noirot, P.}, year={1994}, month=may, pages={561–569} }