Abstract
The assembly of the respiratory apparatus requires the coordinate expression of a large number of genes from both nuclear and mitochondrial genetic systems. In vertebrate organisms, the molecular mechanisms integrating the activities of these distinct genomic compartments in response to tissue demands for respiratory energy remain unknown. A potential inroad to this problem came with the discovery of nuclear respiratory factor 1 (NRF-1), a novel transcriptional activator defined by mutational and DNA binding analysis of the somatic cytochrome c promoter. Functional NRF-1 sites are now observed in several other recently isolated nuclear genes whose products function in the mitochondria. Among these are genes encoding subunits of the cytochrome c oxidase (subunit VIc) and reductase (ubiquinone-binding protein) complexes. In addition, a functional NRF-1 site resides in the MRP RNA gene encoding the RNA moiety of a ribonucleoprotein endonuclease involved in mitochondrial DNA replication. Synthetic oligomers of these sites competitively displace NRF-1 binding to the cytochrome c promoter. NRF-1-binding activities for each site also have the same thermal lability, copurify chromatographically, and make similar guanosine nucleotide contacts within each recognition sequence. Moreover, NRF-1 recognition in vitro correlates with the ability of each site to stimulate expression in vivo from a truncated cytochrome c promoter. The presence of NRF-1-binding sites in nuclear genes encoding structural components of the mammalian electron transport chain, as well as the mitochondrial DNA replication machinery, suggests a mechanism for coordination of nuclear and mitochondrial genetic systems through the concerted modulation of nuclear genes.
References
46
Referenced
351
{'key': '2021111320073609000_4.6.1023.1', 'first-page': '1947', 'article-title': 'Three sequence-specific DNA-protein complexes are formed with the same promoter element essential for expression of the rat somatostatin gene.', 'volume': '8', 'year': '1988', 'journal-title': 'Mol. Cell. Biol.'}
/ Mol. Cell. Biol. / Three sequence-specific DNA-protein complexes are formed with the same promoter element essential for expression of the rat somatostatin gene. (1988)10.1016/S0074-7696(08)61373-X
10.1016/0003-9861(75)90511-1
10.1126/science.3529394
10.1126/science.2434997
10.1016/0092-8674(89)90991-4
10.1093/nar/11.5.1475
{'key': '2021111320073609000_4.6.1023.8', 'first-page': '35', 'article-title': 'Both upstream and intron sequence elements are required for elevated expression of the rat somatic cytochrome c gene in COS-1 cells.', 'volume': '8', 'year': '1988', 'journal-title': 'Mol. Cell. Biol.'}
/ Mol. Cell. Biol. / Both upstream and intron sequence elements are required for elevated expression of the rat somatic cytochrome c gene in COS-1 cells. (1988)10.1073/pnas.85.24.9625
10.1016/S0021-9258(18)71686-4
/ J. Biol. Chem. / Interaction of nuclear factors with multiple sites in the somatic cytochrome c promoter. Characterization of upstream NRF-1, ATF, and intron Sp1 recognition sites. (1989)10.1016/0092-8674(87)90220-0
10.1146/annurev.cb.05.110189.001101
/ Rev. Cell Biol. / Communication between mitochondria and the nucleus in regulation of cytochrome c genes in the yeast Sacchammyces cerevisiae. Annu. (1989)10.1101/gad.2.10.1216
10.1146/annurev.bi.54.070185.005055
10.1016/0022-2836(67)90307-5
10.1016/0303-7207(85)90019-X
10.1146/annurev.bi.58.070189.004055
10.1073/pnas.83.16.5889
{'key': '2021111320073609000_4.6.1023.19', 'first-page': '1227', 'article-title': 'Octamer-binding proteins from B or HeLa cells stimulate transcription of the immunoglobulin heavy-chain promoter in vitro.', 'volume': '2', 'year': '1989', 'journal-title': 'Genes Dev.'}
/ Genes Dev. / Octamer-binding proteins from B or HeLa cells stimulate transcription of the immunoglobulin heavy-chain promoter in vitro. (1989)10.1073/pnas.84.23.8355
10.1073/pnas.85.10.3396
10.1016/S0076-6879(80)65059-9
10.1016/0092-8674(86)90766-X
10.1016/0092-8674(87)90751-3
10.1111/j.1749-6632.1988.tb35344.x
10.1002/jcp.1041360316
10.1016/S0021-9258(17)36106-9
/ J. Biol. Chem. / Purification of nuclear factor I by DNA recognition site affinity chromatography. (1986)10.1073/pnas.74.12.5463
{'key': '2021111320073609000_4.6.1023.29', 'first-page': '2279', 'article-title': 'Processed pseudogenes for rat cytochrome c are preferentially derived from one of three alternate mRNAs.', 'volume': '4', 'year': '1984', 'journal-title': 'Mol. Cell. Biol.'}
/ Mol. Cell. Biol. / Processed pseudogenes for rat cytochrome c are preferentially derived from one of three alternate mRNAs. (1984)10.1016/0092-8674(83)90467-1
10.1016/S0021-9258(17)38552-6
/ J. Biol. Chem. / Coordinate induction of multiple cytochrome c mRNAs in response to thyroid hormone. (1986)10.1002/j.1460-2075.1989.tb08392.x
/ EMBO J. / A family of octamer-specific proteins present during mouse embryogenesis: Evidence for germline-specific expression of an Oct factor. (1989)10.1073/pnas.86.5.1583
{'key': '2021111320073609000_4.6.1023.34', 'first-page': '3160', 'article-title': 'A constitutive promoter directs expression of the nerve growth factor receptor gene.', 'volume': '8', 'year': '1988', 'journal-title': 'Mol. Cell. Biol.'}
/ Mol. Cell. Biol. / A constitutive promoter directs expression of the nerve growth factor receptor gene. (1988)10.1073/pnas.84.17.6112
10.1016/S0021-9258(18)73453-4
/ J. Biol. Chem. / The estimation and distribution of cytochrome oxidase and cytochrome c in rat tissues. (1939)10.1089/dna.1988.7.163
10.1016/S0021-9258(18)94196-7
/ J. Biol. Chem. / Structural organization of the mitochondrial cytochrome c 1 gene. (1989)10.1016/0006-291X(89)91607-0
10.1111/j.1749-6632.1986.tb46546.x
10.1042/bj0860408
10.1093/nar/18.4.793
10.1016/S0021-9258(18)68712-5
/ J. Biol. Chem. / Structure and expression of rodent genes encoding the testis-specific cytochrome c. Differences in gene structure and evolution between somatic and testicular variants. (1988){'key': '2021111320073609000_4.6.1023.44', 'first-page': '2098', 'article-title': 'Specific protein binding to the simian virus 40 enhancer in vitro.', 'volume': '6', 'year': '1986', 'journal-title': 'Mol. Cell. Biol.'}
/ Mol. Cell. Biol. / Specific protein binding to the simian virus 40 enhancer in vitro. (1986)10.1016/S0021-9258(18)67252-7
/ J. Biol. Chem. / Mitochondrial gene expression in mammalian striated muscle: Evidence that variation in gene dosage is the major regulatory event. (1986)10.1016/S0021-9258(18)63776-7
/ J. Biol. Chem. / Rat nucleolar 7-2 RNA is homologous to mouse mitochondrial RNase mitochondrial RNA-processing RNA. (1989)
Dates
Type | When |
---|---|
Created | 18 years, 2 months ago (June 5, 2007, 5:15 p.m.) |
Deposited | 3 years, 9 months ago (Nov. 13, 2021, 11:08 p.m.) |
Indexed | 1 week ago (Aug. 28, 2025, 8:48 a.m.) |
Issued | 35 years, 3 months ago (June 1, 1990) |
Published | 35 years, 3 months ago (June 1, 1990) |
Published Online | 35 years, 3 months ago (June 1, 1990) |
Published Print | 35 years, 3 months ago (June 1, 1990) |
@article{Evans_1990, title={NRF-1: a trans-activator of nuclear-encoded respiratory genes in animal cells.}, volume={4}, ISSN={1549-5477}, url={http://dx.doi.org/10.1101/gad.4.6.1023}, DOI={10.1101/gad.4.6.1023}, number={6}, journal={Genes & Development}, publisher={Cold Spring Harbor Laboratory}, author={Evans, M J and Scarpulla, R C}, year={1990}, month=jun, pages={1023–1034} }