DOI: 10.1101/gad.1307205. Developmentally induced changes in transcriptional program alter spatial organization across chromosomes

Developmentally induced changes in transcriptional program alter spatial organization across chromosomes

10.1101/gad.1307205

Crossref journal-article

Cold Spring Harbor Laboratory

Genes & Development (246)

Abstract

Although the spatial location of genes within the nucleus has been implicated in their transcriptional status, little is known about the dynamics of gene location that accompany large-scale changes in gene expression. The mating of haploid yeast Saccharomyces cerevisiae is accompanied by a large-scale change in transcription and developmental program. We examined changes in nuclear organization that accompany stimulus by the mating pheromone α factor and found that most α-factor-induced genes become associated with components of the nuclear envelope. The myosin-like protein Mlp1, which has been implicated in mRNA export, was further shown to exhibit RNA dependence in its association with α-factor-induced genes. High-resolution mapping of association of chromosome III with Mlp1 revealed α-factor-dependent determinants of nuclear pore association, including origins of replication, specific intergenic regions, and the 3′ ends of transcriptionally activated genes. Taken together, these results reveal RNA- and DNA-dependent determinants of nuclear organization as well as a detailed picture of how an entire chromosome alters its spatial conformation in response to a developmental cue.

Bibliography

Casolari, J. M., Brown, C. R., Drubin, D. A., Rando, O. J., & Silver, P. A. (2005). Developmentally induced changes in transcriptional program alter spatial organization across chromosomes. Genes & Development, 19(10), 1188â1198.

Authors 5

Jason M. Casolari (first)
Christopher R. Brown (additional)
David A. Drubin (additional)
Oliver J. Rando (additional)
Pamela A. Silver (additional)

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Dates

Type	When
Created	20 years, 3 months ago (May 19, 2005, 2:19 p.m.)
Deposited	3 years, 9 months ago (Nov. 16, 2021, 10:28 a.m.)
Indexed	3 weeks, 2 days ago (Aug. 7, 2025, 4:39 p.m.)
Issued	20 years, 3 months ago (May 15, 2005)
Published	20 years, 3 months ago (May 15, 2005)
Published Online	20 years, 3 months ago (May 19, 2005)
Published Print	20 years, 3 months ago (May 15, 2005)

Funders 0

None

BibTeX

@article{Casolari_2005, title={Developmentally induced changes in transcriptional program alter spatial organization across chromosomes}, volume={19}, ISSN={1549-5477}, url={http://dx.doi.org/10.1101/gad.1307205}, DOI={10.1101/gad.1307205}, number={10}, journal={Genes & Development}, publisher={Cold Spring Harbor Laboratory}, author={Casolari, Jason M. and Brown, Christopher R. and Drubin, David A. and Rando, Oliver J. and Silver, Pamela A.}, year={2005}, month=may, pages={1188–1198} }

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