Crossref journal-article
Oxford University Press (OUP)
Journal of Experimental Botany (286)
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Stork, T., Michel, K.-P., Pistorius, E. K., & Dietz, K.-J. (2005). Bioinformatic analysis of the genomes of the cyanobacteria Synechocystis sp. PCC 6803 and Synechococcus elongatus PCC 7942 for the presence of peroxiredoxins and their transcript regulation under stress. Journal of Experimental Botany, 56(422), 3193–3206.

Authors 4
  1. Tina Stork (first)
  2. Klaus-Peter Michel (additional)
  3. Elfriede K. Pistorius (additional)
  4. Karl-Josef Dietz (additional)
References 56 Referenced 69
  1. Anderson JM, Chow WS, Park Y-I. 1995. The grand design of photosynthesis: acclimation of the photosynthetic apparatus to environmental cues. Photosynthesis Research46,129–139. (10.1007/BF00020423)
  2. Aro EM, Virgin I, Andersson B. 1993. Photoinhibition of photosystem II. Inactivation, protein damage and turnover. Biochimica et Biophysica Acta1143,113–134. (10.1016/0005-2728(93)90134-2)
  3. Asada K. 1999. Responses to active oxygens, strong and weak lights, an overview. Tanpakushitsu Kakusan Koso44,2230–2231.
  4. Baier M, Dietz KJ. 1996. Primary structure and expression of plant homologues of animal and fungal thioredoxin-dependent peroxide reductases and bacterial alkyl hydroperoxide reductases. Plant Molecular Biology31,553–564. (10.1007/BF00042228)
  5. Baier M, Dietz KJ. 1997. The plant 2-Cys peroxiredoxin BAS1 is a nuclear-encoded chloroplast protein: its expressional regulation, phylogenetic origin, and implications for its specific physiological function in plants. The Plant Journal12,179–190. (10.1046/j.1365-313X.1997.12010179.x)
  6. Baier M, Stroher E, Dietz KJ. 2004. The acceptor availability at photosystem I and ABA control nuclear expression of 2-Cys peroxiredoxin-A in Arabidopsis thaliana. Plant Cell Physiology45,997–1006. (10.1093/pcp/pch114)
  7. Barber J, Andersson B. 1992. Too much of a good thing: light can be bad for photosynthesis. Trends in Biochemical Science17,61–66. (10.1016/0968-0004(92)90503-2)
  8. Bibby TS, Nield J, Barber J. 2001. Three-dimensional model and characterization of the iron-stress induced CP43′-photosystem I supercomplex isolated from the cyanobacterium Synechocystis PCC 6803. Journal of Biological Chemistry22,22–30. (10.1074/jbc.M106541200)
  9. Boekema EJ, Hifney A, Yakushevska AE, Piotrowski M, Keegstra W, Berry S, Michel KP, Pistorius EK, Kruip J. 2001 A giant chlorophyll–protein complex induced by iron deficiency in cyanobacteria. Nature412,745–748.
  10. Collin V, Lamkemeyer P, Miginiac-Maslow M, Hirasawa M, Knaff DB, Dietz KJ, Issakidis-Bourguet E. 2004. Characterization of plastidial thioredoxins from Arabidopsis belonging to the new y-type. Plant Physiology136,4088–4095. (10.1104/pp.104.052233)
  11. Dietz KJ. 2003. Plant peroxiredoxins. Annual Review of Plant Biology54,93–107. (10.1146/annurev.arplant.54.031902.134934)
  12. Dietz KJ, Horling F, Konig J, Baier M. 2002. The function of the chloroplast 2-cysteine peroxiredoxin in peroxide detoxification and its regulation. Journal of Experimental Botany53,1321–1329.
  13. Dietz KJ, Stork T, Finkemeier I, Lamkemeyer P, Li WX, El-Tayeb MA, Michel KP, Pistorius EK, Baier M. 2005. The role of peroxiredoxins in oxygenic photosynthesis of cyanobacteria and higher plants: peroxide detoxification or redox sensing? In: Demmig-Adams B, Adams W, Mattoo A, eds. Photoprotection, photoinhibition, and environment. Dordrecht, New York, London: Kluwer Academic Press.
  14. Fadi Aldehni M, Sauer J, Spielhaupter C, Schmid R, Forchhammer K. 2003. Signal transduction protein P(II) is required for NtcA-regulated gene expression during nitrogen deprivation in the cyanobacterium Synechococcus elongatus strain PCC 7942. Journal of Bacteriology185,2582–2591. (10.1128/JB.185.8.2582-2591.2003)
  15. Foyer CH, Lelandais M, Kunert KJ. 1994. Photooxidative stress in plants. Physiologia Plantarum92,696–717. (10.1111/j.1399-3054.1994.tb03042.x)
  16. Helmann JD, Wu MF, Gaballa A, Kobel PA, Morshedi MM, Fawcett P, Paddon C. 2003. The global transcriptional response of Bacillus subtilis to peroxide stress is coordinated by three transcription factors. Journal of Bacteriology185,243–253. (10.1128/JB.185.1.243-253.2003)
  17. Hihara Y, Sonoike K, Kanehisa M, Ikeuchi M. 2003. DNA microarray analysis of redox-responsive genes in the genome of the cyanobacterium Synechocystis sp. strain PCC 6803. Journal of Bacteriology185,1719–1725. (10.1128/JB.185.5.1719-1725.2003)
  18. Hofmann B, Hecht HJ, Flohe L. 2002. Peroxiredoxins. Biological Chemistry383,347–364. (10.1515/BC.2002.040)
  19. Horling F, Baier M, Dietz KJ. 2001. Redox-regulation of the expression of the peroxide-detoxifying chloroplast 2-cys peroxiredoxin in the liverwort Riccia fluitans. Planta214,304–313.
  20. Horling F, König J, Dietz KJ. 2002. TypeII peroxiredoxin C, a member of the peroxiredoxin family of Arabidopsis thaliana: its expression and activity in comparison with other peroxiredoxins. Plant Physiology and Biochemistry40,491–499. (10.1016/S0981-9428(02)01396-7)
  21. Horling F, Lamkemeyer P, Konig J, Finkemeier I, Kandlbinder A, Baier M, Dietz KJ. 2003. Divergent light-, ascorbate-, and oxidative stress-dependent regulation of expression of the peroxiredoxin gene family in Arabidopsis. Plant Physiology131,317–325. (10.1104/pp.010017)
  22. Hosoya-Matsuda N, Motohashi K, Yoshimura H, Nozaki A, Inoue K, Ohmori M, Hisabori T. 2005. Anti-oxidative stress system in cyanobacteria. Significance of type II peroxiredoxin and the role of 1-Cys peroxiredoxin in Synechocystis sp. strain PCC 6803. Journal of Biological Chemistry280,840–846. (10.1074/jbc.M411493200)
  23. Huner NPA, Maxwell DP, Gray GR, Savitch LV, Krol M, Ivanov AG, Falk S. 1996. Sensing environmental temperature change through imbalance between energy supply and energy consumption: Redox state of photosystem II. Physiologia Plantarum98,358–364. (10.1034/j.1399-3054.1996.980218.x)
  24. Kaneko T, Sato S, Kotani H, et al. 1996. Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC 6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions (supplement). DNA Research3,185–209. (10.1093/dnares/3.3.185)
  25. Klughammer B, Baier M, Dietz KJ. 1998. Inactivation by gene disruption of 2-cysteine-peroxiredoxin in Synechocystis sp. PCC 6803 leads to increased stress sensitivity. Physiologia Plantarum104,699–706. (10.1034/j.1399-3054.1998.1040426.x)
  26. Kobayashi M, Ishizuka T, Katayama M, Kanehisa M, Bhattacharyya-Pakrasi M, Pakrasi HB, Ikeuchi M. 2004. Response to oxidative stress involves a novel peroxiredoxin gene in the unicellular cyanobacterium Synechocystis sp. PCC 6803. Plant and Cell Physiology45,290–299. (10.1093/pcp/pch034)
  27. Kong W, Shiota S, Shi Y, Nakayama H, Nakayama K. 2000. A novel peroxiredoxin of the plant Sedum lineare is a homologue of Escherichia coli bacterioferritin co-migratory protein (Bcp). Biochemistry Journal351,107–114. (10.1042/bj3510107)
  28. Konig J, Baier M, Horling F, Kahmann U, Harris G, Schurmann P, Dietz KJ. 2002. The plant-specific function of 2-Cys peroxiredoxin-mediated detoxification of peroxides in the redox-hierarchy of photosynthetic electron flux. Proceedings of the National Academy of Sciences, USA99,5738–5743. (10.1073/pnas.072644999)
  29. König J, Lotte K, Plessow R, Bronkhinke A, Baier H, Dietz K-J. 2003. Reaction mechanism of the 2-Cys peroxiredoxins: role of the C-terminus and the quaternary structure. Journal of Biological Chemistry278,24409–24420. (10.1074/jbc.M301145200)
  30. Lamkemeyer P, Finkemeier I, Kandlbinder A, Baier M, Dietz KJ. 2003. The role of peroxiredoxin Q in the antioxidant defence system of the chloroplast. Free Radical Research Supplement 37,40.
  31. Li H, Singh AK, McIntyre LM, Sherman LA. 2004. Differential gene expression in response to hydrogen peroxide and the putative PerR regulon of Synechocystis sp. strain PCC 6803. Journal of Bacteriology186,3331–3345. (10.1128/JB.186.11.3331-3345.2004)
  32. Michel KP, Krüger F, Pühler A, Pistorius EK. 1999. Molecular characterization of idiA and adjacent genes in the cyanobacteria Synechococcus sp. strains PCC 6301 and PCC 7942. Microbiology145,1473–1484.
  33. Michel KP, Pistorius EK. 2004. Adaptation of the photosynthetic electron transport chain in cyanobacteria to iron deficiency: the function of IdiA and IsiA. Physiologia Plantarum119,1–15. (10.1111/j.0031-9317.2004.0229.x)
  34. Mittler R. 2002. Oxidative stress, antioxidants and stress tolerance. Trends in Plant Science7,405–410. (10.1016/S1360-1385(02)02312-9)
  35. Motohashi K, Kondoh A, Stumpp MT, Hisabori T. 2001. Comprehensive survey of proteins targeted by chloroplast thioredoxin. Proceedings of the National Academy of Sciences, USA98,11224–11229. (10.1073/pnas.191282098)
  36. Mowla SB, Thomson JA, Farrant JM, Mundree SG. 2002. A novel stress-inducible antioxidant enzyme identified from the resurrection plant Xerophyta viscosa Baker. Planta215,716–726.
  37. Mutsuda M, Ishikawa T, Takeda T, Shigeoka S. 1996. The catalase-peroxidase of Synechococcus PCC 7942: purification, nucleotide sequence analysis and expression in Escherichia coli. Biochemistry Journal316,251–257. (10.1042/bj3160251)
  38. Niyogi KK. 1999. Photoprotection revisited: genetic and molecularapproaches. Annual Review of Plant Physiology and Plant Molecular Biology50,333–359. (10.1146/annurev.arplant.50.1.333)
  39. Perelman A, Uzan A, Hacohen D, Schwarz R. 2003. Oxidative stress in Synechococcus sp. strain PCC 7942: various mechanisms for H2O2 detoxification with different physiological roles. Journal of Bacteriology185,3654–3660. (10.1128/JB.185.12.3654-3660.2003)
  40. Reddy KJ, Webb R, Sherman LA. 1990. Bacterial RNA isolation with one hour centrifugation in a table-top ultracentrifuge. BioTechniques8,250–251.
  41. Regelsberger G, Jakopitsch C, Plasser L, Schwaiger H, Furtmüller PG, Peschek GA, Zamocky M, Obinger C. 2002. Occurrence and biochemistry of hydroperoxidases in oxygenic phototrophic prokaryotes (cyanobacteria). Plant Physiology and Biochemistry40,479–490. (10.1016/S0981-9428(02)01405-5)
  42. Rippka R, Derulles J, Waterbury JB, Herdman M, Stanier RY. 1979. Generic assignments, strain histories and properties of pure cultures of cyanobacteria. Journal of General Microbiology111,1–61. (10.1099/00221287-111-1-1)
  43. Rouhier N, Gelhaye E, Gualberto JM, et al. 2004. Poplar peroxiredoxin Q. A thioredoxin-linked chloroplast antioxidant functional in pathogen defense. Plant Physiology134,1027–1038. (10.1104/pp.103.035865)
  44. Schwarz R, Forchhammer K. 2005. Acclimation of unicellular cyanobacteria to macronutrient deficiency: emerge of a complex network of cellular responses. Molecular Microbiology (in press). (10.1099/mic.0.27883-0)
  45. Seaver LC, Imlay JA. 2001. Alkyl hydroperoxide reductase is the primary scavenger of endogenous hydrogen peroxide in Escherichia coli. Journal of Bacteriology183,7173–7181. (10.1128/JB.183.24.7173-7181.2001)
  46. Stacy RA, Munthe E, Steinum T, Sharma B, Aalen RB. 1996. A peroxiredoxin antioxidant is encoded by a dormancy-related gene, Per1, expressed during late development in the aleurone and embryo of barley grains. Plant Molecular Biology31,1205–1216. (10.1007/BF00040837)
  47. Stephan DP, Ruppel HG, Pistorius EK. 2000. Interrelation between cyanophycin synthesis, L-arginine catabolism and photosynthesis in the cyanobacterium Synechocystis sp. strain PCC 6803. Zeitschrift für Naturforschung [C]55,927–942. (10.1515/znc-2000-11-1214)
  48. Straus NA. 1994. Iron deprivation: physiology and gene regulation. In: Bryant DA, ed. The molecular biology of cyanobacteria. Dordrecht, Boston. London: Kluwer Academic Publishers, 731–750. (10.1007/978-94-011-0227-8_25)
  49. Tichy M, Vermaas W. 1999. In vivo role of catalase-peroxidase in Synechocystis sp. strain PCC 6803. Journal of Bacteriology181,1875–1882.
  50. Veal EA, Findlay VJ, Day AM, Bozonet SM, Evans JM, Quinn J, Morgan BA. 2004. A 2-Cys peroxiredoxin regulates peroxide-induced oxidation and activation of a stress-activated MAP kinase. The Molecular Cell15,129–139. (10.1016/j.molcel.2004.06.021)
  51. Vinnemeier J, Kunert A, Hagemann M. 1998. Transcriptional analysis of the isiAB operon in salt-stressed cells of the cyanobacterium Synechocystis sp. PCC 6803. FEMS Microbiology Letters169,323–330. (10.1111/j.1574-6968.1998.tb13336.x)
  52. Whitton BA, Potts M. 2000. Introduction to the cyanobacteria. In: Whitton BA, Potts M, eds. The ecology of cyanobacteria: their diversity in time and space. Dordrecht, London, Boston: Kluwer Academic Publishers, 1–11.
  53. Wood ZA, Poole LB, Karplus PA. 2003 a. Peroxiredoxin evolution and the regulation of hydrogen peroxide signaling. Science300,650–653.
  54. Wood ZA, Schroder E, Robin Harris J, Poole LB. 2003 b. Structure, mechanism and regulation of peroxiredoxins. Trends in Biochemical Science28,32–40. (10.1016/S0968-0004(02)00003-8)
  55. Yamamoto H, Miyake C, Dietz KJ, Tomizawa K, Murata N, Yokota A. 1999. Thioredoxin peroxidase in the cyanobacterium Synechocystis sp. PCC 6803. FEBS Letters447,269–273. (10.1016/S0014-5793(99)00309-9)
  56. Yousef N, Pistorius EK, Michel KP. 2003. Comparative analysis of idiA and isiA transcription under iron starvation and oxidative stress in Synechococcus elongatus PCC 7942 wild type and selected mutants. Archiv für Microbiologie180,471–483. (10.1007/s00203-003-0618-4)
Dates
Type When
Created 19 years, 9 months ago (Nov. 10, 2005, 8:25 p.m.)
Deposited 2 years, 3 months ago (May 5, 2023, 6:30 a.m.)
Indexed 14 minutes ago (Sept. 2, 2025, 9:34 a.m.)
Issued 19 years, 9 months ago (Nov. 10, 2005)
Published 19 years, 9 months ago (Nov. 10, 2005)
Published Online 19 years, 9 months ago (Nov. 10, 2005)
Published Print 19 years, 9 months ago (Dec. 1, 2005)
Funders 0

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@article{Stork_2005, title={Bioinformatic analysis of the genomes of the cyanobacteria Synechocystis sp. PCC 6803 and Synechococcus elongatus PCC 7942 for the presence of peroxiredoxins and their transcript regulation under stress}, volume={56}, ISSN={0022-0957}, url={http://dx.doi.org/10.1093/jxb/eri316}, DOI={10.1093/jxb/eri316}, number={422}, journal={Journal of Experimental Botany}, publisher={Oxford University Press (OUP)}, author={Stork, Tina and Michel, Klaus-Peter and Pistorius, Elfriede K. and Dietz, Karl-Josef}, year={2005}, month=nov, pages={3193–3206} }