DOI: 10.1093/bioinformatics/btg021. Protein family annotation in a multiple alignment viewer

Protein family annotation in a multiple alignment viewer

10.1093/bioinformatics/btg021

Crossref journal-article

Oxford University Press (OUP)

Bioinformatics (286)

Abstract

Abstract Summary: The Pfaat protein family alignment annotation tool is a Java-based multiple sequence alignment editor and viewer designed for protein family analysis. The application merges display features such as dendrograms, secondary and tertiary protein structure with SRS retrieval, subgroup comparison, and extensive user-annotation capabilities. Availability: The program and source code are freely available from the authors under the GNU General Public License at http://www.pfizerdtc.com Contact: jason_johnson@merck.comenoch_huang@cambridge.pfizer.com * To whom correspondence should be addressed. † Present address: Rosetta Inpharmatics, 12040 115th Avenue NE, Kirkland, WA 98034, USA.

Bibliography

Johnson, J. M., Mason, K., Moallemi, C., Xi, H., Somaroo, S., & Huang, E. S. (2003). Protein family annotation in a multiple alignment viewer. Bioinformatics, 19(4), 544â545.

Authors 6

Jason M. Johnson (first)
Keith Mason (additional)
Ciamac Moallemi (additional)
Hualin Xi (additional)
Shyamal Somaroo (additional)
Enoch S. Huang (additional)

References 0 Referenced 26

None

Dates

Type	When
Created	22 years, 6 months ago (Feb. 28, 2003, 2:57 p.m.)
Deposited	2 years, 7 months ago (Jan. 25, 2023, 11:44 a.m.)
Indexed	1 month, 1 week ago (July 20, 2025, 6:57 p.m.)
Issued	22 years, 5 months ago (March 1, 2003)
Published	22 years, 5 months ago (March 1, 2003)
Published Online	22 years, 5 months ago (March 1, 2003)
Published Print	22 years, 5 months ago (March 1, 2003)

Funders 0

None

BibTeX

@article{Johnson_2003, title={Protein family annotation in a multiple alignment viewer}, volume={19}, ISSN={1367-4803}, url={http://dx.doi.org/10.1093/bioinformatics/btg021}, DOI={10.1093/bioinformatics/btg021}, number={4}, journal={Bioinformatics}, publisher={Oxford University Press (OUP)}, author={Johnson, Jason M. and Mason, Keith and Moallemi, Ciamac and Xi, Hualin and Somaroo, Shyamal and Huang, Enoch S.}, year={2003}, month=mar, pages={544–545} }

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