DOI: 10.1093/bioinformatics/19.1.161. InterPreTS: protein Interaction Prediction through Tertiary Structure

InterPreTS: protein Interaction Prediction through Tertiary Structure

10.1093/bioinformatics/19.1.161

Crossref journal-article

Oxford University Press (OUP)

Bioinformatics (286)

Abstract

Abstract Summary: InterPreTS (Interaction Prediction through Tertiary Structure) is a web-based version of our method for predicting protein–protein interactions (Aloy and Russell, 2002, Proc. Natl Acad. Sci. USA, 99, 5896–5901). Given a pair of query sequences, we first search for homologues in a database of interacting domains (DBID) of known three-dimensional complex structures. Pairs of sequences homologous to a known interacting pair are scored for how well they preserve the atomic contacts at the interaction interface. InterPreTS includes a useful interface for visualising molecular details of any predicted interaction. Availability: http://www.russell.embl.de/interprets Contact: aloy@embl.de * To whom correspondence should be addressed.

Bibliography

Aloy, P., & Russell, R. B. (2003). InterPreTS: protein Interaction Prediction through Tertiary Structure. Bioinformatics, 19(1), 161â162.

Authors 2

Patrick Aloy (first)
Robert B. Russell (additional)

References 0 Referenced 157

None

Dates

Type	When
Created	22 years, 8 months ago (Dec. 23, 2002, 2:42 p.m.)
Deposited	2 years, 7 months ago (Jan. 25, 2023, 10:43 a.m.)
Indexed	1 month ago (July 26, 2025, 4:48 a.m.)
Issued	22 years, 7 months ago (Jan. 1, 2003)
Published	22 years, 7 months ago (Jan. 1, 2003)
Published Online	22 years, 7 months ago (Jan. 1, 2003)
Published Print	22 years, 7 months ago (Jan. 1, 2003)

Funders 0

None

BibTeX

@article{Aloy_2003, title={InterPreTS: protein Interaction Prediction through Tertiary Structure}, volume={19}, ISSN={1367-4803}, url={http://dx.doi.org/10.1093/bioinformatics/19.1.161}, DOI={10.1093/bioinformatics/19.1.161}, number={1}, journal={Bioinformatics}, publisher={Oxford University Press (OUP)}, author={Aloy, Patrick and Russell, Robert B.}, year={2003}, month=jan, pages={161–162} }

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