Abstract
Structural maintenance of chromosomes (SMC) proteins function in chromosome condensation and several other aspects of DNA processing. They are large proteins characterized by an NH2-terminal nucleotide triphosphate (NTP)-binding domain, two long segments of coiled coil separated by a hinge, and a COOH-terminal domain. Here, we have visualized by EM the SMC protein from Bacillus subtilis (BsSMC) and MukB from Escherichia coli, which we argue is a divergent SMC protein. Both BsSMC and MukB show two thin rods with globular domains at the ends emerging from the hinge. The hinge appears to be quite flexible: the arms can open up to 180°, separating the terminal domains by 100 nm, or close to near 0°, bringing the terminal globular domains together. A surprising observation is that the ∼300–amino acid–long coiled coils are in an antiparallel arrangement. Known coiled coils are almost all parallel, and the longest antiparallel coiled coils known previously are 35–45 amino acids long. This antiparallel arrangement produces a symmetrical molecule with both an NH2- and a COOH-terminal domain at each end. The SMC molecule therefore has two complete and identical functional domains at the ends of the long arms. The bifunctional symmetry and a possible scissoring action at the hinge should provide unique biomechanical properties to the SMC proteins.
References
34
Referenced
316
10.1038/370621a0
/ Nature / Structure at 2.8 Å resolution of F1-ATPase from bovine heart mitochondria by Abrahams (1994)10.1101/gad.12.9.1254
/ Genes Dev / Characterization of a prokaryotic SMC protein involved in chromosome partitioning by Britton (1998)10.1073/pnas.95.14.7969
/ Proc Natl Acad Sci USA / The SbcCD nuclease of Escherichia coliis a structural maintenance of chromosomes (SMC) family protein that cleaves hairpin DNA by Connelly (1998){'key': '2023072207590590500_B4'}
10.1016/0022-2836(79)90034-2
/ J Mol Biol / Trinodular structure of fibrinogen. Confirmation by both shadowing and negative stain electron microscopy by Fowler (1979)10.1016/S0092-8674(01)80008-8
/ Cell / A direct link between sister chromatid cohesion and chromosome condensation revealed through the analysis of MCD1 in S. cerevisiae. by Guacci (1997)10.1016/S0092-8674(01)80002-7
/ Cell / Condensins, cohesins, and chromosome architecture: how to make and break a mitotic chromosome by Heck (1997)10.1016/0092-8674(94)90254-2
/ Cell / A heterodimeric coiled-coil protein required for mitotic chromosome condensation in vitro by Hirano (1994)10.1016/0955-0674(95)80087-5
/ Curr Opin Cell Biol / The SMC family: from chromosome condensation to dosage compensation by Hirano (1995)10.1016/S0092-8674(00)80233-0
/ Cell / Condensins, chromosome condensation protein complexes containing XCAP-C, XCAP-E and a Xenopus homolog of the Drosophilabarren protein by Hirano (1997)10.1002/j.1460-2075.1996.tb00779.x
/ EMBO (Eur Mol Biol Organ) J / SMC proteins constitute two subunits of the mammalian recombination complex RC-1 by Jessberger (1996)10.1016/S0959-437X(98)80149-4
/ Curr Opin Genet Dev / Chromosome dynamics—the SMC protein family by Jessberger (1998)10.1016/S0092-8674(00)80524-3
/ Cell / ATP-dependent positive supercoiling of DNA by 13S condensin: a biochemical implication for chromosome condensation by Kimura (1997)10.1146/annurev.cellbio.12.1.305
/ Annu Rev Cell Dev Biol / Mitotic chromosome condensation by Koshland (1996)10.1016/S0092-8674(00)81002-8
/ Cell / 2.0 Å crystal structure of a four-domain segment of human fibronectin encompassing the RGD loop and synergy region by Leahy (1996)10.1016/S0092-8674(00)80920-4
/ Cell / MIX-1: an essential component of the C. elegansmitotic machinery executes X chromosome dosage compensation by Lieb (1998)10.1101/gad.12.13.1986
/ Genes Dev / Identification of XenopusSMC protein complexes required for sister chromatid cohesion by Losada (1998)10.1006/prep.1997.0775
/ Protein Expr Purif / Expression in Escherichia coli of the thermostable DNA polymerase from Pyrococcus furiosus. by Lu (1997)10.1016/S0092-8674(01)80007-6
/ Cell / Cohesins: chromosomal proteins that prevent premature separation of sister chromatids by Michaelis (1997)10.1002/j.1460-2075.1991.tb07935.x
/ EMBO (Eur Mol Biol Organ) J / The new gene mukB codes for a 177 kd protein with coiled-coil domains involved in chromosome partitioning of E. coli. by Niki (1991)10.1002/j.1460-2075.1992.tb05617.x
/ EMBO (Eur Mol Biol Organ) J / E. coliMukB protein involved in chromosome partition forms a homodimer with a rod-and-hinge structure having DNA binding and ATP/ GTP binding activities by Niki (1992)10.1021/bi962391t
/ Biochemistry / Protein dissection of the antiparallel coiled coil from Escherichia coliseryl tRNA synthetase by Oakley (1997)10.1074/jbc.272.22.14220
/ J Biol Chem / Two oligomeric forms of plasma ficolin have differential lectin activity by Ohashi (1997)10.1083/jcb.127.2.303
/ J Cell Biol / ScII: an abundant chromosome scaffold protein is a member of a family of putative ATPases with an unusual predicted tertiary structure by Saitoh (1994)10.1002/bies.950170905
/ BioEssays / The SMC proteins and the coming of age of the chromosome scaffold hypothesis by Saitoh (1995)10.1002/j.1460-2075.1994.tb06821.x
/ EMBO (Eur Mol Biol Organ) J / Fission yeast cut3 and cut14, members of a ubiquitous protein family, are required for chromosome condensation and segregation in mitosis by Saka (1994)10.1111/j.1574-6968.1996.tb08482.x
/ FEMS Microbiol Lett / Carboxyl terminal region of the MukB protein in Escherichia coliis essential for DNA binding activity by Saleh (1996)10.1016/0926-6585(66)90333-5
/ Biochim Biophys Acta / Determination of molecular weights and frictional ratios of proteins in impure systems by use of gel filtration and density gradient centrifugation by Siegel (1966)10.1083/jcb.123.6.1635
/ J Cell Biol / SMC1: an essential yeast gene encoding a putative head-rod-tail protein is required for nuclear division and defines a new ubiquitous protein family by Strunnikov (1993)10.1101/gad.9.5.587
/ Genes Dev / SMC2, a Saccharomyces cerevisiaegene essential for chromosome segregation and condensation, defines a subgroup within the SMC family by Strunnikov (1995)10.1016/0076-6879(90)85008-C
/ Methods Enzymol / Use of T7 RNA polymerase to direct expression of cloned genes by Studier (1990){'key': '2023072207590590500_B32'}
10.1111/j.1574-6968.1994.tb07196.x
/ FEMS Microbiol Lett / Two mutant alleles of mukB, a gene essential for chromosome partition in Escherichia coli. by Yamanaka (1994){'key': '2023072207590590500_B34', 'first-page': '241', 'article-title': 'Identification of two new genes, mukE and mukF, involved in chromosome partitioning in Escherichia coli', 'volume': '250', 'author': 'Yamanaka', 'year': '1996', 'journal-title': 'Mol Gen Genet'}
/ Mol Gen Genet / Identification of two new genes, mukE and mukF, involved in chromosome partitioning in Escherichia coli by Yamanaka (1996)
Dates
Type | When |
---|---|
Created | 23 years, 1 month ago (July 26, 2002, 12:47 p.m.) |
Deposited | 2 years, 1 month ago (July 22, 2023, 4 a.m.) |
Indexed | 3 weeks ago (Aug. 7, 2025, 4:52 p.m.) |
Issued | 26 years, 11 months ago (Sept. 21, 1998) |
Published | 26 years, 11 months ago (Sept. 21, 1998) |
Published Online | 26 years, 11 months ago (Sept. 21, 1998) |
Published Print | 26 years, 11 months ago (Sept. 21, 1998) |
@article{Melby_1998, title={The Symmetrical Structure of Structural Maintenance of Chromosomes (SMC) and MukB Proteins: Long, Antiparallel Coiled Coils, Folded at a Flexible Hinge}, volume={142}, ISSN={1540-8140}, url={http://dx.doi.org/10.1083/jcb.142.6.1595}, DOI={10.1083/jcb.142.6.1595}, number={6}, journal={The Journal of Cell Biology}, publisher={Rockefeller University Press}, author={Melby, Thomas E. and Ciampaglio, Charles N. and Briscoe, Gina and Erickson, Harold P.}, year={1998}, month=sep, pages={1595–1604} }