Crossref journal-article
Elsevier BV
Journal of Biological Chemistry (78)
Bibliography

Zhang, H., Zhang, H., Gao, Z.-Q., Wang, W.-J., Liu, G.-F., Xu, J.-H., Su, X.-D., & Dong, Y.-H. (2013). Structure of the Type VI Effector-Immunity Complex (Tae4-Tai4) Provides Novel Insights into the Inhibition Mechanism of the Effector by Its Immunity Protein*. Journal of Biological Chemistry, 288(8), 5928–5939.

Authors 8
  1. Heng Zhang (first)
  2. Heng Zhang (additional)
  3. Zeng-Qiang Gao (additional)
  4. Wen-Jia Wang (additional)
  5. Guang-Feng Liu (additional)
  6. Jian-Hua Xu (additional)
  7. Xiao-Dong Su (additional)
  8. Yu-Hui Dong (additional)
References 37 Referenced 59
  1. 10.1111/j.1600-0854.2006.00446.x / Traffic / Recognition and delivery of effector proteins into eukaryotic cells by bacterial secretion systems by Cambronne (2006)
  2. 10.1016/j.chom.2009.12.007 / Cell Host Microbe / A type VI secretion system of Pseudomonas aeruginosa targets a toxin to bacteria by Hood (2010)
  3. 10.1038/nature10244 / Nature / Type VI secretion delivers bacteriolytic effectors to target cells by Russell (2011)
  4. 10.1371/journal.ppat.1002613 / PLoS Pathogens / Structural basis for type VI secretion effector recognition by a cognate immunity protein by Li (2012)
  5. 10.1016/j.jmb.2012.01.040 / J. Mol. Biol. / Crystal structure of Pseudomonas aeruginosa Tsi2 reveals a stably folded superhelical antitoxin by Zou (2012)
  6. 10.1016/j.chom.2012.04.007 / Cell Host Microbe / A widespread type VI secretion effector superfamily identified using a heuristic approach by Russell (2012)
  7. 10.1371/journal.pone.0040453 / PLoS ONE / Structural insights into the effector-immunity system Tse1/Tsi1 from Pseudomonas aeruginosa by Benz (2012)
  8. 10.1016/j.celrep.2012.05.016 / Cell Rep. / Structure of a peptidoglycan amidase effector targeted to Gram-negative bacteria by the type VI secretion system by Chou (2012)
  9. 10.1074/jbc.M112.368043 / J. Biol. Chem. / Structural insights into the Pseudomonas aeruginosa type VI virulence effector Tse1 bacteriolysis and self-protection mechanisms by Ding (2012)
  10. 10.1016/j.febslet.2012.06.036 / FEBS Lett. / Crystal structure of type VI effector Tse1 from Pseudomonas aeruginosa by Zhang (2012)
  11. 10.1016/j.febslet.2012.03.029 / FEBS Lett. / The crystal structure of the MPN domain from COP9 signalosome subunit CSN6 by Zhang (2012)
  12. 10.1016/S0076-6879(97)76066-X / Methods Enzymol. / Processing of x-ray diffraction data collected in oscillation mode by Otwinowski (1997)
  13. 10.1107/S0907444909038360 / Acta Crystallogr. D Biol. Crystallogr. / Experimental phasing with SHELXC/D/E: combining chain tracing with density modification by Sheldrick (2010)
  14. 10.1107/S0907444900005072 / Acta Crystallogr. D Biol. Crystallogr. / Maximum likelihood density modification by Terwilliger (2000)
  15. 10.1107/S0907444906022116 / Acta Crystallogr. D Biol. Crystallogr. / The Buccaneer software for automated model building by Cowtan (2006)
  16. 10.1107/S0907444910007493 / Acta Crystallogr. D Biol. Crystallogr. / Features and development of Coot by Emsley (2010)
  17. 10.1107/S0907444902016657 / Acta Crystallogr. D Biol. Crystallogr. / PHENIX: building new software for automated crystallographic structure determination by Adams (2002)
  18. 10.1107/S0021889807021206 / J. Appl. Crystallogr. / Phaser crystallographic software by McCoy (2007)
  19. 10.1107/S0907444909042073 / Acta Crystallogr. D Biol. Crystallogr. / MolProbity: all-atom structure validation for macromolecular crystallography by Chen (2010)
  20. 10.1107/S0021889803012779 / J. Appl. Crystallogr. / PRIMUS: a Windows PC-based system for small-angle scattering data analysis by Konarev (2003)
  21. 10.1107/S0021889892001663 / J. Appl. Crystallogr. / Determination of the regularization parameter in indirect-transform methods using perceptual criteria by Svergun (1992)
  22. 10.1107/S0021889895007047 / J. Appl. Crystallogr. / CRYSOL: a program to evaluate x-ray solution scattering of biological macromolecules from atomic coordinates by Svergun (1995)
  23. 10.1016/S0006-3495(01)76260-1 / Biophys. J. / Determination of domain structure of proteins from x-ray solution scattering by Svergun (2001)
  24. 10.1016/S0006-3495(00)76713-0 / Biophys. J. / Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling by Schuck (2000)
  25. 10.1002/jcc.21256 / J. Comput. Chem. / AutoDock4 and AutoDockTools4: automated docking with selective receptor flexibility by Morris (2009)
  26. 10.1186/gb-2003-4-2-r11 / Genome Biol. / Evolutionary history, structural features, and biochemical diversity of the NlpC/P60 superfamily of enzymes by Anantharaman (2003)
  27. 10.1016/S0968-0004(03)00061-6 / Trends Biochem. Sci. / The CHAP domain: a large family of amidases including GSP amidase and peptidoglycan hydrolases by Bateman (2003)
  28. 10.1016/S0968-0004(03)00062-8 / Trends Biochem. Sci. / Amidase domains from bacterial and phage autolysins define a family of γ-dl-glutamate-specific amidohydrolases by Rigden (2003)
  29. 10.1093/bioinformatics/btn507 / Bioinformatics / Searching protein structure databases with DaliLite v. 3 by Holm (2008)
  30. 10.1107/S1744309110021214 / Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. / Structure of the γ-d-glutamyl-l-diamino acid endopeptidase YkfC from Bacillus cereus in complex with l-Ala-γ-d-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases by Xu (2010)
  31. 10.1107/S0907444904026460 / Acta Crystallogr. D Biol. Crystallogr. / Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions by Krissinel (2004)
  32. 10.1016/S0006-291X(67)80055-X / Biochem. Biophys. Res. Commun. / On the size of the active site in proteases. I. Papain by Schechter (1967)
  33. 10.1093/nar/gki370 / Nucleic Acids Res. / ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures by Landau (2005)
  34. 10.1021/bi8010779 / Biochemistry / Solution NMR structure of the NlpC/P60 domain of lipoprotein Spr from Escherichia coli: structural evidence for a novel cysteine peptidase catalytic triad by Aramini (2008)
  35. 10.1101/gad.1956410 / Genes Dev. / Tel2 structure and function in the Hsp90-dependent maturation of mTOR and ATR complexes by Takai (2010)
  36. 10.1128/MMBR.00027-07 / Microbiol. Mol. Biol. Rev. / How bacteria consume their own exoskeletons (turnover and recycling of cell wall peptidoglycan) by Park (2008)
  37. 10.1099/00221287-146-2-249 / Microbiology / Autolysins of Bacillus subtilis: multiple enzymes with multiple functions by Smith (2000)
Dates
Type When
Created 12 years, 8 months ago (Jan. 3, 2013, 11:27 p.m.)
Deposited 3 years, 7 months ago (Jan. 4, 2022, 9:12 a.m.)
Indexed 1 year ago (Aug. 5, 2024, 10:38 p.m.)
Issued 12 years, 7 months ago (Feb. 1, 2013)
Published 12 years, 7 months ago (Feb. 1, 2013)
Published Print 12 years, 7 months ago (Feb. 1, 2013)
Funders 0

None

@article{Zhang_2013, title={Structure of the Type VI Effector-Immunity Complex (Tae4-Tai4) Provides Novel Insights into the Inhibition Mechanism of the Effector by Its Immunity Protein*}, volume={288}, ISSN={0021-9258}, url={http://dx.doi.org/10.1074/jbc.m112.434357}, DOI={10.1074/jbc.m112.434357}, number={8}, journal={Journal of Biological Chemistry}, publisher={Elsevier BV}, author={Zhang, Heng and Zhang, Heng and Gao, Zeng-Qiang and Wang, Wen-Jia and Liu, Guang-Feng and Xu, Jian-Hua and Su, Xiao-Dong and Dong, Yu-Hui}, year={2013}, month=feb, pages={5928–5939} }