Crossref journal-article
Elsevier BV
Journal of Biological Chemistry (78)
Bibliography

Čabart, P., & Luse, D. S. (2012). Inactivated RNA Polymerase II Open Complexes Can Be Reactivated with TFIIE. Journal of Biological Chemistry, 287(2), 961–967.

Authors 2
  1. Pavel Čabart (first)
  2. Donal S. Luse (additional)
References 42 Referenced 12
  1. 10.1038/nsmb763 / Nat. Struct. Mol. Biol. / Structure and mechanism of the RNA polymerase II transcription machinery by Hahn (2004)
  2. 10.1126/science.8303296 / Science / RNA polymerase II initiation factor interactions and transcription start site selection by Li (1994)
  3. 10.1101/gad.8.5.515 / Genes Dev. / Transcription factor IIE binds preferentially to RNA polymerase IIa and recruits TFIIH. A model for promoter clearance by Maxon (1994)
  4. 10.1128/MCB.15.9.4856 / Mol. Cell. Biol. / Analysis of the role of TFIIE in basal transcription and TFIIH-mediated carboxy-terminal domain phosphorylation through structure-function studies of TFIIE-α by Ohkuma (1995)
  5. 10.1074/jbc.271.33.20170 / J. Biol. Chem. / A minimal set of RNA polymerase II transcription protein interactions by Bushnell (1996)
  6. 10.1002/j.1460-2075.1994.tb06273.x / EMBO J. / Transcription initiation by RNA polymerase II does not require hydrolysis of the β-γ phosphoanhydride bond of ATP by Timmers (1994)
  7. 10.1002/j.1460-2075.1995.tb07059.x / EMBO J. / The requirement for the basal transcription factor IIE is determined by the helical stability of promoter DNA by Holstege (1995)
  8. 10.1016/j.molcel.2011.05.030 / Mol. Cell / The initiation factor TFE and the elongation factor Spt4/5 compete for the RNAP clamp during transcription initiation and elongation by Grohmann (2011)
  9. 10.1101/gad.1437506 / Genes Dev. / Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock by Zanton (2006)
  10. 10.1074/jbc.272.25.15936 / J. Biol. Chem. / Promoter structure-dependent functioning of the general transcription factor IIE in Saccharomyces cerevisiae by Sakurai (1997)
  11. 10.1046/j.1365-2443.2003.00613.x / Genes Cells / Artificial recruitment of certain mediator components affects requirement of basal transcription factor IIE by Sakurai (2003)
  12. 10.1016/j.ceb.2008.03.003 / Curr. Opin. Cell Biol. / The RNA polymerase II core promoter. The gateway to transcription by Juven-Gershon (2008)
  13. 10.1038/nsmb1272 / Nat. Struct. Mol. Biol. / The positions of TFIIF and TFIIE in the RNA polymerase II transcription preinitiation complex by Chen (2007)
  14. 10.1128/MCB.24.3.1122-1131.2004 / Mol. Cell. Biol. / Photo-cross-linking of a purified preinitiation complex reveals central roles for the RNA polymerase II mobile clamp and TFIIE in initiation mechanisms by Forget (2004)
  15. 10.1038/emboj.2011.64 / EMBO J. / Architecture of the RNA polymerase-Spt4/5 complex and basis of universal transcription processivity by Martinez-Rucobo (2011)
  16. 10.1126/science.8465201 / Science / DNA repair helicase. A component of BTF2 (TFIIH) basic transcription factor by Schaeffer (1993)
  17. 10.1016/S0021-9258(19)85335-8 / J. Biol. Chem. / Multifunctional RNA polymerase II initiation factor δ from rat liver. Relationship between carboxyl-terminal domain kinase, ATPase, and DNA helicase activities by Serizawa (1993)
  18. 10.1016/S0021-9258(19)75925-0 / J. Biol. Chem. / Transcription initiation by RNA polymerase II in vitro. At least two nucleotides must be added to form a stable ternary complex by Luse (1987)
  19. 10.1074/jbc.271.13.7245 / J. Biol. Chem. / A role for ATP and TFIIH in activation of the RNA polymerase II preinitiation complex prior to transcription initiation by Dvir (1996)
  20. 10.1073/pnas.1037057100 / Proc. Natl. Acad. Sci. U.S.A. / The initiation-elongation transition. Lateral mobility of RNA in RNA polymerase II complexes is greatly reduced at +8/+9 and absent by +23 by Pal (2003)
  21. 10.1016/j.molcel.2005.05.024 / Mol. Cell / The role of the transcription bubble and TFIIB in promoter clearance by RNA polymerase II by Pal (2005)
  22. 10.1073/pnas.1104591108 / Proc. Natl. Acad. Sci. U.S.A. / Transcription factor TFIIF is not required for initiation by RNA polymerase II, but it is essential to stabilize transcription factor TFIIB in early elongation complexes by Čabart (2011)
  23. 10.1016/S0076-6879(96)74009-0 / Methods Enzymol. / Purification of human RNA polymerase II and general transcription factors by Maldonado (1996)
  24. 10.1038/nsmb1026 / Nat. Struct. Mol. Biol. / RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit by Újvári (2006)
  25. 10.1074/jbc.M110.205658 / J. Biol. Chem. / The functions of TFIIF during initiation and transcript elongation are differentially affected by phosphorylation by casein kinase 2 by Újvári (2011)
  26. 10.1093/emboj/16.24.7468 / EMBO J. / Three transitions in the RNA polymerase II transcription complex during initiation by Holstege (1997)
  27. 10.1093/emboj/16.24.7457 / EMBO J. / Multiple ATP-dependent steps in RNA polymerase II promoter melting and initiation by Yan (1997)
  28. 10.1074/jbc.274.50.35668 / J. Biol. Chem. / Dual roles for transcription factor IIF in promoter escape by RNA polymerase II by Yan (1999)
  29. 10.1016/S1097-2765(00)80177-X / Mol. Cell / Reconstitution of the transcription factor TFIIH. Assignment of functions for the three enzymatic subunits, XPB, XPD, and cdk7 by Tirode (1999)
  30. 10.1093/emboj/18.5.1357 / EMBO J. / Mutations in XPB and XPD helicases found in xeroderma pigmentosum patients impair the transcription function of TFIIH by Coin (1999)
  31. 10.1074/jbc.274.32.22127 / J. Biol. Chem. / A role for the TFIIH XPB DNA helicase in promoter escape by RNA polymerase II by Moreland (1999)
  32. 10.1074/jbc.275.4.2532 / J. Biol. Chem. / Distinct roles for the helicases of TFIIH in transcript initiation and promoter escape by Bradsher (2000)
  33. 10.1016/0092-8674(93)90140-L / Cell / DNA topology and a minimal set of basal factors for transcription by RNA polymerase II by Parvin (1993)
  34. 10.1016/S0021-9258(17)32324-4 / J. Biol. Chem. / Multiple sets of basal factors initiate transcription by RNA polymerase II by Parvin (1994)
  35. 10.1016/S0021-9258(18)43780-5 / J. Biol. Chem. / Initiation of transcription by RNA polymerase II is limited by melting of the promoter DNA in the region immediately upstream of the initiation site by Pan (1994)
  36. 10.1126/science.288.5470.1418 / Science / Mechanism of ATP-dependent promoter melting by transcription factor IIH by Kim (2000)
  37. 10.1074/jbc.M210848200 / J. Biol. Chem. / Promoter escape by RNA polymerase II. Downstream promoter DNA is required during multiple steps of early transcription by Wang (2003)
  38. 10.1038/nsmb1117 / Nat. Struct. Mol. Biol. / A DNA-tethered cleavage probe reveals the path for promoter DNA in the yeast preinitiation complex by Miller (2006)
  39. 10.1128/MCB.02272-07 / Mol. Cell. Biol. / Functions of Saccharomyces cerevisiae TFIIF during transcription start site utilization by Khaperskyy (2008)
  40. 10.1016/S0092-8674(01)00223-9 / Cell / Defective interplay of activators and repressors with TFIIH in xeroderma pigmentosum by Liu (2001)
  41. 10.1073/pnas.1013828108 / Proc. Natl. Acad. Sci. U.S.A. / RNA polymerase and transcription elongation factor Spt4/5 complex structure by Klein (2011)
  42. 10.1073/pnas.0707892105 / Proc. Natl. Acad. Sci. U.S.A. / p53 and TFIIEα share a common binding site on the Tfb1/p62 subunit of TFIIH by Di Lello (2008)
Dates
Type When
Created 13 years, 8 months ago (Nov. 29, 2011, 12:02 a.m.)
Deposited 3 years, 7 months ago (Jan. 4, 2022, 7:20 p.m.)
Indexed 1 year ago (Aug. 4, 2024, 7:34 p.m.)
Issued 13 years, 7 months ago (Jan. 1, 2012)
Published 13 years, 7 months ago (Jan. 1, 2012)
Published Print 13 years, 7 months ago (Jan. 1, 2012)
Funders 0

None

@article{_abart_2012, title={Inactivated RNA Polymerase II Open Complexes Can Be Reactivated with TFIIE}, volume={287}, ISSN={0021-9258}, url={http://dx.doi.org/10.1074/jbc.m111.297572}, DOI={10.1074/jbc.m111.297572}, number={2}, journal={Journal of Biological Chemistry}, publisher={Elsevier BV}, author={Čabart, Pavel and Luse, Donal S.}, year={2012}, month=jan, pages={961–967} }