Abstract
A simple model of the kinetics of protein folding is presented. The reaction coordinate is the "correctness" of a configuration compared with the native state. The model has a gap in the energy spectrum, a large configurational entropy, a free energy barrier between folded and partially folded states, and a good thermodynamic folding transition. Folding kinetics is described by a master equation. The folding time is estimated by means of a local thermodynamic equilibrium assumption and then is calculated both numerically and analytically by solving the master equation. The folding time has a maximum near the folding transition temperature and can have a minimum at a lower temperature.
Dates
Type | When |
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Created | 19 years, 2 months ago (May 31, 2006, 9:21 a.m.) |
Deposited | 3 years, 4 months ago (April 13, 2022, 2:04 p.m.) |
Indexed | 1 month ago (July 25, 2025, 6:21 a.m.) |
Issued | 29 years, 10 months ago (Oct. 10, 1995) |
Published | 29 years, 10 months ago (Oct. 10, 1995) |
Published Online | 29 years, 10 months ago (Oct. 10, 1995) |
Published Print | 29 years, 10 months ago (Oct. 10, 1995) |
@article{Zwanzig_1995, title={Simple model of protein folding kinetics.}, volume={92}, ISSN={1091-6490}, url={http://dx.doi.org/10.1073/pnas.92.21.9801}, DOI={10.1073/pnas.92.21.9801}, number={21}, journal={Proceedings of the National Academy of Sciences}, publisher={Proceedings of the National Academy of Sciences}, author={Zwanzig, R}, year={1995}, month=oct, pages={9801–9804} }