Crossref journal-article
Proceedings of the National Academy of Sciences
Proceedings of the National Academy of Sciences (341)
Abstract

Molecular dynamics simulations are used to calculate the incoherent neutron scattering spectra of myoglobin between 80 K and 325 K and compared with experimental data. There is good agreement over the entire temperature range for the elastic, quasi-elastic, and inelastic components of the scattering. This provides support for the accuracy of the simulations of the internal motions that make the dominant contributions to the atomic displacements on a time scale of 0.3-100 ps (100-0.3 cm-1). Analysis of the simulations shows that at low temperatures a harmonic description of the molecule is appropriate and that the molecule is trapped in localized regions of conformational space. At higher temperatures the scattering arises from a combination of vibrations within wells (substates) and transitions between them; the latter contribute to the quasi-elastic scattering.

Bibliography

Smith, J., Kuczera, K., & Karplus, M. (1990). Dynamics of myoglobin: comparison of simulation results with neutron scattering spectra. Proceedings of the National Academy of Sciences, 87(4), 1601–1605.

Authors 3
  1. J Smith (first)
  2. K Kuczera (additional)
  3. M Karplus (additional)
References 0 Referenced 127

None

Dates
Type When
Created 19 years, 2 months ago (May 31, 2006, 7:33 a.m.)
Deposited 3 years, 4 months ago (April 13, 2022, 1:05 p.m.)
Indexed 1 hour, 17 minutes ago (Aug. 30, 2025, 1:13 p.m.)
Issued 35 years, 6 months ago (Feb. 1, 1990)
Published 35 years, 6 months ago (Feb. 1, 1990)
Published Online 35 years, 6 months ago (Feb. 1, 1990)
Published Print 35 years, 6 months ago (Feb. 1, 1990)
Funders 0

None

@article{Smith_1990, title={Dynamics of myoglobin: comparison of simulation results with neutron scattering spectra.}, volume={87}, ISSN={1091-6490}, url={http://dx.doi.org/10.1073/pnas.87.4.1601}, DOI={10.1073/pnas.87.4.1601}, number={4}, journal={Proceedings of the National Academy of Sciences}, publisher={Proceedings of the National Academy of Sciences}, author={Smith, J and Kuczera, K and Karplus, M}, year={1990}, month=feb, pages={1601–1605} }