Abstract
High levels of genomic and allelic microvariation have been found in major marine planktonic microbial species, including the ubiquitous open ocean cyanobacterium, Prochlorococcus marinus . Crocosphaera watsonii is a unicellular cyanobacterium that has recently been shown to be important in oceanic N 2 fixation and has been reported from the Atlantic and Pacific oceans in both hemispheres, and the Arabian Sea. In direct contrast to the current observations of genomic variability in marine non-N 2 -fixing planktonic cyanobacteria, which can range up to >15% nucleotide sequence divergence, we discovered that the marine planktonic nitrogen-fixing cyanobacterial genus Crocosphaera has remarkably low genomic diversity, with <1% nucleotide sequence divergence in several genes among widely distributed populations and strains. The cultivated C. watsonii WH8501 genome sequence was virtually identical to DNA sequences of large metagenomic fragments cloned from the subtropical North Pacific Ocean with <1% sequence divergence even in intergenic regions. Thus, there appears to be multiple strategies for evolution, adaptation, and diversification in oceanic microbial populations. The C. watsonii genome contains multiple copies of several families of transposases that may be involved in maintaining genetic diversity through genome rearrangements. Although genomic diversity seems to be the rule in many, if not most, marine microbial lineages, different forces may control the evolution and diversification in low abundance microorganisms, such as the nitrogen-fixing cyanobacteria.
References
38
Referenced
65
10.1128/aem.63.1.63-70.1997
10.1126/science.1106028
10.1038/nature01947
10.1073/pnas.1733211100
10.1128/AEM.68.3.1180-1191.2002
10.1128/AEM.68.1.335-345.2002
10.1126/science.1120250
10.1126/science.1093857
10.1371/journal.pbio.0050077
10.1038/387272a0
10.1128/AEM.70.12.7355-7364.2004
10.1038/35088063
10.1038/nature02824
10.1128/AEM.70.2.765-770.2004
10.3354/ame038003
10.1029/98JC02000
10.1016/S0967-0637(96)00102-1
10.1128/AEM.64.9.3444-3450.1998
10.1128/AEM.71.9.5362-5370.2005
- JB Waterbury, R Rippka Bergey's Manual of Systematic Bacteriology, eds JT Staley, MP Bryant, N Pfenning, JG Holt (Williams & Wilkins, Baltimore) Vol 3, 1728–1729 (1989). / Bergey's Manual of Systematic Bacteriology by Waterbury JB (1989)
10.1038/ismej.2007.5
10.1128/AEM.68.11.5760-5764.2002
10.3354/ame046015
10.1128/AEM.71.12.7910-7919.2005
10.1046/j.1462-2920.2003.00451.x
10.1128/AEM.68.5.2567-2571.2002
10.1111/j.1574-6976.2000.tb00529.x
10.1128/JB.01021-06
10.1111/j.0022-3646.1993.00806.x
10.1128/aem.56.11.3527-3531.1990
10.1016/j.copbio.2004.03.007
10.1186/gb-2005-6-2-r14
10.1093/oxfordjournals.molbev.a004050
10.4319/lo.2002.47.4.0989
10.1126/science.1118052
10.1073/pnas.2133554100
10.4319/lo.2007.52.1.0169
10.1093/nar/gkh293
Dates
Type | When |
---|---|
Created | 17 years, 9 months ago (Oct. 30, 2007, 11:33 p.m.) |
Deposited | 3 years, 4 months ago (April 12, 2022, 3:39 p.m.) |
Indexed | 1 week, 4 days ago (Aug. 19, 2025, 6:56 a.m.) |
Issued | 17 years, 9 months ago (Nov. 6, 2007) |
Published | 17 years, 9 months ago (Nov. 6, 2007) |
Published Online | 17 years, 9 months ago (Nov. 6, 2007) |
Published Print | 17 years, 9 months ago (Nov. 6, 2007) |
@article{Zehr_2007, title={Low genomic diversity in tropical oceanic N 2 -fixing cyanobacteria}, volume={104}, ISSN={1091-6490}, url={http://dx.doi.org/10.1073/pnas.0701017104}, DOI={10.1073/pnas.0701017104}, number={45}, journal={Proceedings of the National Academy of Sciences}, publisher={Proceedings of the National Academy of Sciences}, author={Zehr, Jonathan P. and Bench, Shellie R. and Mondragon, Elizabeth A. and McCarren, Jay and DeLong, Edward F.}, year={2007}, month=nov, pages={17807–17812} }