Abstract
Protein synthesis requires the accurate positioning of mRNA and tRNA in the peptidyl-tRNA site of the ribosome. Here we describe x-ray crystal structures of the intact bacterial ribosome from Escherichia coli in a complex with mRNA and the anticodon stem-loop of P-site tRNA. At 3.5-Å resolution, these structures reveal rearrangements in the intact ribosome that clamp P-site tRNA and mRNA on the small ribosomal subunit. Binding of the anticodon stem-loop of P-site tRNA to the ribosome is sufficient to lock the head of the small ribosomal subunit in a single conformation, thereby preventing movement of mRNA and tRNA before mRNA decoding.
References
32
Referenced
150
10.1016/S0092-8674(02)00619-0
10.1261/rna.2163103
10.1016/j.molcel.2004.10.030
10.1016/j.molcel.2005.10.007
10.1038/nsmb978
10.1126/science.145.3639.1399
10.1021/bi00359a025
10.1126/science.1060089
10.1038/35030019
10.1126/science.1117230
10.1261/rna.2192805
10.1186/1471-2105-3-2
10.1016/0092-8674(86)90813-5
10.1126/science.7528943
10.1016/j.mib.2006.02.010
10.1111/j.1365-2958.2004.04067.x
10.1073/pnas.79.18.5450
10.1073/pnas.081082398
10.1073/pnas.0405227101
10.1016/S1097-2765(03)00275-2
10.1016/j.molcel.2005.10.006
10.1016/j.jmb.2005.09.010
10.1016/S0021-9258(19)41172-1
10.1016/S0076-6879(97)76066-X
10.1107/S0907444994003112
10.1107/S0907444900013263
10.1107/S0907444998003254
- TA Jones Molecular Replacement, eds EJ Dodson, S Gover, W Wolf (Science and Engineering Research Council Daresbury Laboratory, Warrington, UK), pp. 91–105 (1992). / Molecular Replacement by Jones TA (1992)
10.1107/S0108767390010224
10.1016/S0092-8674(02)01086-3
- M Carson Methods in Enzymology, eds CW Carter, RM Sweet (Academic, New York) Vol 277, 493–505 (1997). / Methods in Enzymology by Carson M (1997)
- WL Delano The PyMOL User's Manual. (Delano Scientific San Carlos CA 2002).
Dates
Type | When |
---|---|
Created | 18 years, 10 months ago (Oct. 13, 2006, 6:36 a.m.) |
Deposited | 3 years, 4 months ago (April 12, 2022, 2:38 p.m.) |
Indexed | 3 weeks ago (Aug. 2, 2025, 1:14 a.m.) |
Issued | 18 years, 9 months ago (Oct. 24, 2006) |
Published | 18 years, 9 months ago (Oct. 24, 2006) |
Published Online | 18 years, 9 months ago (Oct. 24, 2006) |
Published Print | 18 years, 9 months ago (Oct. 24, 2006) |
@article{Berk_2006, title={Structural basis for mRNA and tRNA positioning on the ribosome}, volume={103}, ISSN={1091-6490}, url={http://dx.doi.org/10.1073/pnas.0607541103}, DOI={10.1073/pnas.0607541103}, number={43}, journal={Proceedings of the National Academy of Sciences}, publisher={Proceedings of the National Academy of Sciences}, author={Berk, Veysel and Zhang, Wen and Pai, Raj D. and Cate, Jamie H. D.}, year={2006}, month=oct, pages={15830–15834} }