Crossref journal-article
AIP Publishing
The Journal of Chemical Physics (317)
Abstract

A linear-scaling method to carry out semiempirical quantum mechanical calculations for large systems has been developed based on the density matrix version of the divide-and-conquer approach. The method has been tested and demonstrated to be accurate and efficient. With this implementation, semiempirical quantum mechanical calculations are made possible for large molecules over 9000 atoms on a typical workstation. For biological macromolecules, solvent effects are included with a dielectric continuum model.

Bibliography

Lee, T.-S., York, D. M., & Yang, W. (1996). Linear-scaling semiempirical quantum calculations for macromolecules. The Journal of Chemical Physics, 105(7), 2744–2750.

Authors 3
  1. Tai-Sung Lee (first)
  2. Darrin M. York (additional)
  3. Weitao Yang (additional)
References 50 Referenced 156
  1. {'key': '2024020622201414800_r1'}
  2. 10.1021/j100044a042 / J. Phys. Chem. (1995)
  3. 10.1021/ja00145a025 / J. Am. Chem. Soc. (1995)
  4. {'key': '2024020622201414800_r4', 'first-page': '438', 'volume': '66', 'year': '1991', 'journal-title': 'Phys. Rev. Lett.'} / Phys. Rev. Lett. (1991)
  5. 10.1103/PhysRevA.44.7823 / Phys. Rev. A (1991)
  6. 10.1103/PhysRevLett.69.3547 / Phys. Rev. Lett. (1992)
  7. 10.1103/PhysRevB.47.10891 / Phys. Rev. B (1993)
  8. 10.1103/PhysRevB.47.9973 / Phys. Rev. B (1993)
  9. 10.1103/PhysRevB.48.14646 / Phys. Rev. B (1993)
  10. {'key': '2024020622201414800_r10', 'first-page': '3898', 'volume': '49', 'year': '1993', 'journal-title': 'Phys. Rev. B'} / Phys. Rev. B (1993)
  11. {'key': '2024020622201414800_r11', 'first-page': '122', 'volume': '73', 'year': '1994', 'journal-title': 'Phys. Rev. B'} / Phys. Rev. B (1994)
  12. 10.1016/S0009-2614(95)01235-4 / Chem. Phys. Lett. (1995)
  13. 10.1016/0009-2614(95)00665-Q / Chem. Phys. Lett. (1995)
  14. 10.1063/1.471517 / J. Chem. Phys. (1996)
  15. 10.1016/0009-2614(94)01128-1 / Chem. Phys. Lett. (1994)
  16. 10.1126/science.271.5245.51 / Science (1996)
  17. {'key': '2024020622201414800_r17'}
  18. 10.1016/S0040-4020(01)86235-9 / Tetrahedron (1988)
  19. {'key': '2024020622201414800_r19'}
  20. 10.1063/1.470549 / J. Chem. Phys. (1995)
  21. {'key': '2024020622201414800_r21'}
  22. 10.1007/BF00128336 / J. Comput.-aided Mol. Design (1990)
  23. 10.1063/1.1740588 / J. Chem. Phys. (1955)
  24. 10.1021/ja00079a025 / J. Am. Chem. Soc. (1993)
  25. {'key': '2024020622201414800_r25', 'first-page': '371', 'volume': '29', 'year': '1995', 'journal-title': 'J. Quantum Chem.'} / J. Quantum Chem. (1995)
  26. 10.1063/1.468776 / J. Chem. Phys. (1995)
  27. 10.1016/0097-8485(78)80005-9 / Comput. Chem. (1978)
  28. 10.1016/0009-2614(85)80574-1 / Chem. Phys. Lett. (1985)
  29. {'key': '2024020622201414800_r29'}
  30. {'key': '2024020622201414800_r30', 'first-page': '799', 'volume': '2', 'year': '1993', 'journal-title': 'Perkin Trans.'} / Perkin Trans. (1993)
  31. 10.1063/1.470048 / J. Chem. Phys. (1995)
  32. 10.1063/1.469990 / J. Chem. Phys. (1995)
  33. {'key': '2024020622201414800_r33'}
  34. {'key': '2024020622201414800_r34'}
  35. 10.1002/jcc.540100208 / J. Comput. Chem. (1989)
  36. 10.1002/jcc.540100209 / J. Comput. Chem. (1989)
  37. 10.1021/bi00167a006 / Biochemistry (1994)
  38. 10.1006/jmbi.1993.1143 / J. Mol. Biol. (1993)
  39. 10.1107/S0567740875002415 / Acta Crystallograph. B (1975)
  40. {'key': '2024020622201414800_r40', 'first-page': '7815', 'volume': '91', 'year': '1994', 'journal-title': 'Proc. Natl. Acad. Sci.'} / Proc. Natl. Acad. Sci. (1994)
  41. 10.1126/science.2548279 / Science (1989)
  42. 10.1063/1.465608 / J. Chem. Phys. (1993)
  43. {'key': '2024020622201414800_r43', 'first-page': '250', 'volume': '50', 'year': '1994', 'journal-title': 'Acta Crystallograph. B'} / Acta Crystallograph. B (1994)
  44. 10.1002/j.1460-2075.1990.tb07409.x / EMBO J. (1990)
  45. 10.1126/science.1678899 / Science (1991)
  46. 10.1021/bi00320a014 / Biochemistry (1984)
  47. 10.1126/science.8351519 / Science (1993)
  48. 10.1126/science.7624794 / Science (1995)
  49. 10.1126/science.265.5174.909 / Science (1994)
  50. 10.1016/0009-2614(94)01128-1 / Chem. Phys. Lett. (1994)
Dates
Type When
Created 23 years ago (July 26, 2002, 8:15 a.m.)
Deposited 1 year, 6 months ago (Feb. 6, 2024, 8:13 p.m.)
Indexed 3 weeks, 1 day ago (Aug. 2, 2025, 1:13 a.m.)
Issued 29 years ago (Aug. 15, 1996)
Published 29 years ago (Aug. 15, 1996)
Published Print 29 years ago (Aug. 15, 1996)
Funders 0

None

@article{Lee_1996, title={Linear-scaling semiempirical quantum calculations for macromolecules}, volume={105}, ISSN={1089-7690}, url={http://dx.doi.org/10.1063/1.472136}, DOI={10.1063/1.472136}, number={7}, journal={The Journal of Chemical Physics}, publisher={AIP Publishing}, author={Lee, Tai-Sung and York, Darrin M. and Yang, Weitao}, year={1996}, month=aug, pages={2744–2750} }