DOI: 10.1063/1.1308514. Geometry selects highly designable structures

Geometry selects highly designable structures

10.1063/1.1308514

Crossref journal-article

AIP Publishing

The Journal of Chemical Physics (317)

Abstract

By enumerating all sequences of length 20, we study the designability of structures in a two-dimensional hydrophobic-polar (HP) lattice model in a wide range of intermonomer interaction parameters. We find that although the histogram of designability depends on interaction parameters, the set of highly designable structures is invariant. So in the HP lattice model the high designability should be a purely geometrical feature. Our results suggest two geometrical properties for highly designable structures; they have the maximum number of contacts and a unique neighborhood vector representation. Also we show that the contribution of perfectly stable sequences in the designability of structures plays a major role in making them highly designable.

Bibliography

Shahrezaei, V., & Ejtehadi, M. R. (2000). Geometry selects highly designable structures. The Journal of Chemical Physics, 113(15), 6437â6442.

Authors 2

V. Shahrezaei (first)
M. R. Ejtehadi (additional)

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{'key': '2023070816131892100_r20a'}
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Dates

Type	When
Created	23 years, 1 month ago (July 26, 2002, 8:41 a.m.)
Deposited	2 years, 1 month ago (July 8, 2023, 12:13 p.m.)
Indexed	2 months, 1 week ago (June 27, 2025, 6:51 a.m.)
Issued	24 years, 10 months ago (Oct. 15, 2000)
Published	24 years, 10 months ago (Oct. 15, 2000)
Published Print	24 years, 10 months ago (Oct. 15, 2000)

Funders 0

None

BibTeX

@article{Shahrezaei_2000, title={Geometry selects highly designable structures}, volume={113}, ISSN={1089-7690}, url={http://dx.doi.org/10.1063/1.1308514}, DOI={10.1063/1.1308514}, number={15}, journal={The Journal of Chemical Physics}, publisher={AIP Publishing}, author={Shahrezaei, V. and Ejtehadi, M. R.}, year={2000}, month=oct, pages={6437–6442} }

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