Crossref journal-article
Wiley
Molecular Microbiology (311)
Abstract

SummaryIn the yeastSaccharomyces cerevisiae, genes involved in phospholipid biosynthesis are activated by ICRE (inositol/choline‐responsive element) up‐stream motifs and the corresponding heterodimeric binding factor, Ino2 + Ino4. Both Ino2 and Ino4 contain basic helix–loop–helix (bHLH) domains required for ICRE binding, whereas transcriptional activation is mediated exclusively by Ino2. In this work, we describe a molecular analysis of functional minimal domains responsible for specific DNA recognition and transcriptional activation (TAD1 and TAD2). We also define the importance of individual amino acids within the more important activation domain TAD1. Random mutagenesis at five amino acid positions showed the importance of acidic as well as hydrophobic residues within this minimal TAD. We also investigated the contribution of known general transcription factors and co‐activators for Ino2‐dependent gene activation. Although anada5single mutant and agal11 paf1double mutant were severely affected, a partial reduction in activation was found forgcn5andsrb2. Ino2 interacts physically with the basal transcription factor Sua7 (TFIIB of yeast). Interestingly, interaction is mediated by the HLH dimerization domain of Ino2 and by two non‐overlapping domains within Sua7. Thus, Sua7 may compete with Ino4 for binding to the Ino2 activator, creating the possibility of positive and negative influence of Sua7 on ICRE‐dependent gene expression.

Bibliography

Dietz, M., Heyken, W., Hoppen, J., Geburtig, S., & Schüller, H. (2003). TFIIB and subunits of the SAGA complex are involved in transcriptional activation of phospholipid biosynthetic genes by the regulatory protein Ino2 in the yeastSaccharomyces cerevisiae. Molecular Microbiology, 48(4), 1119–1130. Portico.

Authors 5
  1. Martin Dietz (first)
  2. Willm‐Thomas Heyken (additional)
  3. Jens Hoppen (additional)
  4. Susanne Geburtig (additional)
  5. Hans‐Joachim Schüller (additional)
References 68 Referenced 31
  1. 10.1074/jbc.270.42.25087
  2. 10.1093/nar/20.6.1411
  3. 10.1016/0092-8674(85)90246-6
  4. 10.1126/science.1060214
  5. 10.1074/jbc.271.50.32359
  6. 10.1126/science.1846049
  7. 10.1016/0092-8674(89)90516-3
  8. 10.1101/gad.206901
  9. 10.1038/330670a0
  10. 10.1101/gad.11.13.1640
  11. 10.1007/BF00331845
  12. 10.1093/nar/24.12.2324
  13. 10.1016/S0021-9258(18)82077-4
  14. 10.1016/S0960-9822(00)00363-8
  15. 10.1016/S0079-6603(08)60826-0
  16. 10.1016/S0014-5793(97)01085-5
  17. 10.1128/MCB.17.6.3220
  18. 10.1016/S0021-9258(19)39624-3 / J Biol Chem / The Saccharomyces cerevisiae INO4 gene encodes a small, highly basic protein required for derepression of phospholipid biosynthesis enzymes by Hoshizaki D.K. (1990)
  19. 10.1128/MCB.16.10.5557
  20. 10.1016/S0092-8674(00)80217-2
  21. 10.1016/S1097-2765(00)00129-5
  22. 10.1101/gad.12.1.34
  23. 10.1101/gad.911501
  24. 10.1038/35015104
  25. 10.1016/0092-8674(93)90076-3
  26. 10.1038/353569a0
  27. 10.1093/oso/9780198502487.001.0001 / Helix–Loop–Helix Transcription Factors by Littlewood T.D. (1998)
  28. 10.1126/science.1062322
  29. 10.1093/nar/19.14.3987
  30. 10.1093/nar/19.7.1687
  31. 10.1128/jb.175.13.4235-4238.1993
  32. 10.1128/MCB.18.10.5818
  33. 10.1128/MCB.16.6.3197
  34. 10.1128/MCB.15.5.2839
  35. 10.1093/nar/22.25.5767
  36. 10.1146/annurev.biochem.69.1.729
  37. 10.1146/annurev.biochem.70.1.475
  38. 10.1093/nar/20.12.3253
  39. 10.1038/377119a0
  40. 10.1016/0092-8674(92)90040-J
  41. 10.1128/MCB.17.11.6212
  42. 10.1038/386569a0
  43. 10.1073/pnas.90.3.883
  44. 10.1038/363741a0
  45. 10.1093/nar/28.22.4460
  46. 10.1016/0378-1119(92)90261-M
  47. 10.1073/pnas.93.18.9488
  48. 10.1002/j.1460-2075.1992.tb05033.x
  49. 10.1111/j.1432-1033.1994.00213.x
  50. 10.1016/0014-5793(95)00818-T
  51. 10.1093/nar/23.2.230
  52. 10.1007/s002940050231
  53. 10.1074/jbc.271.9.4827
  54. 10.1128/MCB.17.3.1160
  55. 10.1093/emboj/21.7.1764
  56. 10.1128/MCB.19.1.86
  57. 10.1038/345783a0
  58. 10.1093/nar/26.19.4487
  59. 10.1016/0092-8674(93)90362-T
  60. 10.1016/0959-437X(95)80007-7
  61. 10.1126/science.277.5330.1310
  62. 10.1016/0092-8674(93)90077-4
  63. 10.1002/yea.320101310
  64. 10.1002/(SICI)1097-0061(199907)15:10A<843::AID-YEA424>3.0.CO;2-M
  65. 10.1046/j.1365-2958.2001.02495.x
  66. 10.1128/MCB.17.1.519
  67. 10.1016/S0021-9258(17)35253-5 / J Biol Chem / The OPI1 gene of Saccharomyces cerevisiae, a negative regulator of phospholipid biosynthesis, encodes a protein containing polyglutamine tracts by White M.J. (1991)
  68. 10.1073/pnas.96.6.2764
Dates
Type When
Created 22 years, 3 months ago (May 8, 2003, 10:51 a.m.)
Deposited 1 year, 7 months ago (Jan. 9, 2024, 4:16 p.m.)
Indexed 11 months, 2 weeks ago (Sept. 9, 2024, 1:14 p.m.)
Issued 22 years, 3 months ago (May 1, 2003)
Published 22 years, 3 months ago (May 1, 2003)
Published Online 22 years, 3 months ago (May 8, 2003)
Published Print 22 years, 3 months ago (May 1, 2003)
Funders 0

None

@article{Dietz_2003, title={TFIIB and subunits of the SAGA complex are involved in transcriptional activation of phospholipid biosynthetic genes by the regulatory protein Ino2 in the yeastSaccharomyces cerevisiae}, volume={48}, ISSN={1365-2958}, url={http://dx.doi.org/10.1046/j.1365-2958.2003.03501.x}, DOI={10.1046/j.1365-2958.2003.03501.x}, number={4}, journal={Molecular Microbiology}, publisher={Wiley}, author={Dietz, Martin and Heyken, Willm‐Thomas and Hoppen, Jens and Geburtig, Susanne and Schüller, Hans‐Joachim}, year={2003}, month=may, pages={1119–1130} }