Abstract
SummaryIn the yeastSaccharomyces cerevisiae, genes involved in phospholipid biosynthesis are activated by ICRE (inositol/choline‐responsive element) up‐stream motifs and the corresponding heterodimeric binding factor, Ino2 + Ino4. Both Ino2 and Ino4 contain basic helix–loop–helix (bHLH) domains required for ICRE binding, whereas transcriptional activation is mediated exclusively by Ino2. In this work, we describe a molecular analysis of functional minimal domains responsible for specific DNA recognition and transcriptional activation (TAD1 and TAD2). We also define the importance of individual amino acids within the more important activation domain TAD1. Random mutagenesis at five amino acid positions showed the importance of acidic as well as hydrophobic residues within this minimal TAD. We also investigated the contribution of known general transcription factors and co‐activators for Ino2‐dependent gene activation. Although anada5single mutant and agal11 paf1double mutant were severely affected, a partial reduction in activation was found forgcn5andsrb2. Ino2 interacts physically with the basal transcription factor Sua7 (TFIIB of yeast). Interestingly, interaction is mediated by the HLH dimerization domain of Ino2 and by two non‐overlapping domains within Sua7. Thus, Sua7 may compete with Ino4 for binding to the Ino2 activator, creating the possibility of positive and negative influence of Sua7 on ICRE‐dependent gene expression.
Bibliography
Dietz, M., Heyken, W., Hoppen, J., Geburtig, S., & Schüller, H. (2003). TFIIB and subunits of the SAGA complex are involved in transcriptional activation of phospholipid biosynthetic genes by the regulatory protein Ino2 in the yeastSaccharomyces cerevisiae. Molecular Microbiology, 48(4), 1119â1130. Portico.
References
68
Referenced
31
10.1074/jbc.270.42.25087
10.1093/nar/20.6.1411
10.1016/0092-8674(85)90246-6
10.1126/science.1060214
10.1074/jbc.271.50.32359
10.1126/science.1846049
10.1016/0092-8674(89)90516-3
10.1101/gad.206901
10.1038/330670a0
10.1101/gad.11.13.1640
10.1007/BF00331845
10.1093/nar/24.12.2324
10.1016/S0021-9258(18)82077-4
10.1016/S0960-9822(00)00363-8
10.1016/S0079-6603(08)60826-0
10.1016/S0014-5793(97)01085-5
10.1128/MCB.17.6.3220
10.1016/S0021-9258(19)39624-3
/ J Biol Chem / The Saccharomyces cerevisiae INO4 gene encodes a small, highly basic protein required for derepression of phospholipid biosynthesis enzymes by Hoshizaki D.K. (1990)10.1128/MCB.16.10.5557
10.1016/S0092-8674(00)80217-2
10.1016/S1097-2765(00)00129-5
10.1101/gad.12.1.34
10.1101/gad.911501
10.1038/35015104
10.1016/0092-8674(93)90076-3
10.1038/353569a0
10.1093/oso/9780198502487.001.0001
/ Helix–Loop–Helix Transcription Factors by Littlewood T.D. (1998)10.1126/science.1062322
10.1093/nar/19.14.3987
10.1093/nar/19.7.1687
10.1128/jb.175.13.4235-4238.1993
10.1128/MCB.18.10.5818
10.1128/MCB.16.6.3197
10.1128/MCB.15.5.2839
10.1093/nar/22.25.5767
10.1146/annurev.biochem.69.1.729
10.1146/annurev.biochem.70.1.475
10.1093/nar/20.12.3253
10.1038/377119a0
10.1016/0092-8674(92)90040-J
10.1128/MCB.17.11.6212
10.1038/386569a0
10.1073/pnas.90.3.883
10.1038/363741a0
10.1093/nar/28.22.4460
10.1016/0378-1119(92)90261-M
10.1073/pnas.93.18.9488
10.1002/j.1460-2075.1992.tb05033.x
10.1111/j.1432-1033.1994.00213.x
10.1016/0014-5793(95)00818-T
10.1093/nar/23.2.230
10.1007/s002940050231
10.1074/jbc.271.9.4827
10.1128/MCB.17.3.1160
10.1093/emboj/21.7.1764
10.1128/MCB.19.1.86
10.1038/345783a0
10.1093/nar/26.19.4487
10.1016/0092-8674(93)90362-T
10.1016/0959-437X(95)80007-7
10.1126/science.277.5330.1310
10.1016/0092-8674(93)90077-4
10.1002/yea.320101310
10.1002/(SICI)1097-0061(199907)15:10A<843::AID-YEA424>3.0.CO;2-M
10.1046/j.1365-2958.2001.02495.x
10.1128/MCB.17.1.519
10.1016/S0021-9258(17)35253-5
/ J Biol Chem / The OPI1 gene of Saccharomyces cerevisiae, a negative regulator of phospholipid biosynthesis, encodes a protein containing polyglutamine tracts by White M.J. (1991)10.1073/pnas.96.6.2764
Dates
Type | When |
---|---|
Created | 22 years, 3 months ago (May 8, 2003, 10:51 a.m.) |
Deposited | 1 year, 7 months ago (Jan. 9, 2024, 4:16 p.m.) |
Indexed | 11 months, 2 weeks ago (Sept. 9, 2024, 1:14 p.m.) |
Issued | 22 years, 3 months ago (May 1, 2003) |
Published | 22 years, 3 months ago (May 1, 2003) |
Published Online | 22 years, 3 months ago (May 8, 2003) |
Published Print | 22 years, 3 months ago (May 1, 2003) |
@article{Dietz_2003, title={TFIIB and subunits of the SAGA complex are involved in transcriptional activation of phospholipid biosynthetic genes by the regulatory protein Ino2 in the yeastSaccharomyces cerevisiae}, volume={48}, ISSN={1365-2958}, url={http://dx.doi.org/10.1046/j.1365-2958.2003.03501.x}, DOI={10.1046/j.1365-2958.2003.03501.x}, number={4}, journal={Molecular Microbiology}, publisher={Wiley}, author={Dietz, Martin and Heyken, Willm‐Thomas and Hoppen, Jens and Geburtig, Susanne and Schüller, Hans‐Joachim}, year={2003}, month=may, pages={1119–1130} }