Abstract
Motility is a common behaviour in prokaryotes. Both bacteria and archaea use flagella for swimming motility, but it has been well documented that structures of the flagellum from these two domains of life are completely different, although they contribute to a similar function. Interestingly, information available to date has revealed that structurally archaeal flagella are more similar to bacterial type IV pili rather than to bacterial flagella. With the increasing genome sequence information and advancement in genetic tools for archaea, identification of the components involved in the assembly of the archaeal flagellum is possible. A subset of these components shows similarities to components from type IV pilus-assembly systems. Whereas the molecular players involved in assembly of the archaeal flagellum are being identified, the mechanics and dynamics of the assembly of the archaeal flagellum have yet to be established. Recent computational analysis in our laboratory has identified conserved highly charged loop regions within one of the core proteins of the flagellum, the membrane integral protein FlaJ, and predicted that these are involved in the interaction with the assembly ATPase FlaI. Interestingly, considerable variation was found among the loops of FlaJ from the two major subkingdoms of archaea, the Euryarchaeota and the Crenarchaeota. Understanding the assembly pathway and creating an interaction map of the molecular players in the archaeal flagellum will shed light on the details of the assembly and also the evolutionary relationship to the bacterial type IV pili-assembly systems.
References
56
Referenced
62
10.1111/j.1365-2958.2005.04703.x
/ Mol. Microbiol. / Weapons of mass retraction by Burrows (2005)10.1146/annurev.micro.57.030502.090832
/ Annu. Rev. Microbiol. / How bacteria assemble flagella by Macnab (2003)10.1128/jb.173.6.1971-1977.1991
/ J. Bacteriol. / Rotation and switching of the flagellar motor assembly in Halobacterium halobium by Marwan (1991)10.1159/000077869
/ J. Mol. Microbiol. Biotechnol. / Pulling together with type IV pili by Nudleman (2004)10.1016/S0959-440X(00)00129-9
/ Curr. Opin. Struct. Biol. / Chaperone-assisted pilus assembly and bacterial attachment by Sauer (2000)10.1038/nrmicro1443
/ Nat. Rev. Microbiol. / Pili in Gram-positive pathogens by Telford (2006)10.1111/j.1365-2958.2007.05913.x
/ Mol. Microbiol. / Systematic deletion analyses of the fla genes in the flagella operon identify several genes essential for proper assembly and function of flagella in the archaeon, Methanococcus maripaludis by Chaban (2007)10.1016/S0022-2836(02)00616-2
/ J. Mol. Biol. / The structure of the archeabacterial flagellar filament of the extreme halophile Halobacterium salinarum R1M1 and its relation to eubacterial flagellar filaments and type IV pili by Cohen-Krausz (2002)10.1016/j.jmb.2007.10.048
/ J. Mol. Biol. / The flagellar filament structure of the extreme acidothermophile Sulfolobus shibatae B12 suggests that archaeabacterial flagella have a unique and common symmetry and design by Cohen-Krausz (2008)10.1128/jb.178.17.5057-5064.1996
/ J. Bacteriol. / The archaeal flagellum: a unique motility structure by Jarrell (1996)10.1159/000094053
/ J. Mol. Microbiol. Biotechnol. / Archaeal flagella, bacterial flagella and type IV pili: a comparison of genes and posttranslational modifications by Ng (2006)10.1128/JB.01547-06
/ J. Bacteriol. / Identification of diverse archaeal proteins with class III signal peptides cleaved by distinct archaeal prepilin peptidases by Szabo (2007)10.1159/000094055
/ J. Mol. Microbiol. Biotechnol. / The archaeabacterial flagellar filament: a bacterial propeller with a pilus-like structure by Trachtenberg (2006)10.1038/nrmicro1440
/ Nat. Rev. Microbiol. / Protein secretion in the Archaea: multiple paths towards a unique cell surface by Albers (2006)10.1038/nrmicro1390
/ Nat. Rev. Microbiol. / Cold-adapted archaea by Cavicchioli (2006)10.1126/science.1134772
/ Science / Nitrogen fixation at 92°C by a hydrothermal vent archaeon by Mehta (2006)10.1128/AEM.00574-06
/ Appl. Environ. Microbiol. / Methane- and sulfur-metabolizing microbial communities dominate the Lost City hydrothermal field ecosystem by Brazelton (2006)10.1016/j.copbio.2006.04.002
/ Curr. Opin. Biotechnol. / Rice Cluster I methanogens, an important group of Archaea producing greenhouse gas in soil by Conrad (2006)10.1038/nrmicro1158
/ Nat. Rev. Microbiol. / Microbial community genomics in the ocean by DeLong (2005)10.1038/nrmicro1900
/ Nat. Rev. Microbiol. / The surprisingly diverse ways that prokaryotes move by Jarrell (2008)10.1128/jb.173.22.7113-7125.1991
/ J. Bacteriol. / Cloning and sequencing of a multigene family encoding the flagellins of Methanococcus voltae by Kalmokoff (1991)10.1128/JB.183.24.7154-7164.2001
/ J. Bacteriol. / Characterization of flagellum gene families of methanogenic archaea and localization of novel flagellum accessory proteins by Thomas (2001)10.1186/1471-2148-7-106
/ BMC Evol. Biol. / Phylogenomics of the archaeal flagellum: rare horizontal gene transfer in a unique motility structure by Desmond (2007)10.1046/j.1365-2958.2001.02542.x
/ Mol. Microbiol. / The fla gene cluster is involved in the biogenesis of flagella in Halobacterium salinarum by Patenge (2001)10.1186/1471-2180-9-56
/ BMC Microbiol. / Identification of Archaea-specific chemotaxis proteins which interact with the flagellar apparatus by Schlesner (2009)10.1073/pnas.0902789106
/ Proc. Natl. Acad. Sci. U.S.A. / Insights into pilus assembly and secretion from the structure and functional characterization of usher PapC by Huang (2009)10.1099/mic.0.26364-0
/ Microbiology / Type II protein secretion and its relationship to bacterial type IV pili and archaeal flagella by Peabody (2003)10.1007/s00792-009-0241-7
/ Extremophiles / Diversity of archaeal type IV pilin-like structures by Albers (2009)10.1038/nrmicro885
/ Nat. Rev. Microbiol. / Type IV pilus structure and bacterial pathogenicity by Craig (2004)10.1111/j.1574-6968.2002.tb11060.x
/ FEMS Microbiol. Lett. / FlaK of the archaeon Methanococcus maripaludis possesses preflagellin peptidase activity by Bardy (2002)10.1046/j.1365-2958.2003.03758.x
/ Mol. Microbiol. / Cleavage of preflagellins by an aspartic acid signal peptidase is essential for flagellation in the archaeon Methanococcus voltae by Bardy (2003)10.1128/JB.188.4.1437-1443.2006
/ J. Bacteriol. / Active-site residues in the type IV prepilin peptidase homologue PibD from the archaeon Sulfolobus solfataricus by Szabo (2006)10.1016/j.jmb.2004.12.010
/ J. Mol. Biol. / Refining the structure of the Halobacterium salinarum flagellar filament using the iterative helical real space reconstruction method: insights into polymorphism by Trachtenberg (2005)10.1007/s00792-005-0446-3
/ Extremophiles / Functional and structural characterization of the minimal Sec translocase of the hyperthermophile Thermotoga maritima by Pretz (2005)10.1107/S0907444904006055
/ Acta Crystallogr. Sect. D Biol. Crystallogr. / The pilus-retraction protein PilT: ultrastructure of the biological assembly by Forest (2004)10.1016/j.jmb.2010.05.066
/ J. Mol. Biol. / P. aeruginosa PilT structures with and without nucleotide reveal a dynamic type IV pilus retraction motor by Misic (2010)10.1128/JB.00042-07
/ J. Bacteriol. / Flagellar motility and structure in the hyperthermoacidophilic archaeon Sulfolobus solfataricus by Szabo (2007)10.1099/00221287-143-3-713
/ Microbiology / The general secretion pathway of Erwinia carotovora subsp. carotovora: analysis of the membrane topology of OutC and OutF by Thomas (1997)10.1099/mic.0.2006/002840-0
/ Microbiology / Interaction domains in the Pseudomonas aeruginosa type II secretory apparatus component XcpS (GspF) by Arts (2007)10.1016/j.jsb.2009.03.009
/ J. Struct. Biol. / The three-dimensional structure of the cytoplasmic domains of EpsF from the type 2 secretion system of Vibrio cholerae by Abendroth (2009)10.1002/prot.22720
/ Proteins / Structure and oligomerization of the PilC type IV pilus biogenesis protein from Thermus thermophilus by Karuppiah (2010)10.1139/W08-076
/ Can. J. Microbiol. / Alternative flagellar filament types in the haloarchaeon Haloarcula marismortui by Pyatibratov (2008)10.1128/JB.185.13.3918-3925.2003
/ J. Bacteriol. / Archaeal homolog of bacterial type IV prepilin signal peptidases with broad substrate specificity by Albers (2003)10.1046/j.1365-2958.2002.03220.x
/ Mol. Microbiol. / Mutants in flaI and flaJ of the archaeon Methanococcus voltae are deficient in flagellum assembly by Thomas (2002)10.1007/BF00407699
/ Arch. Mikrobiol. / The attachment of bacteria to solid surfaces by Meadows (1971)10.1016/j.jmb.2008.08.057
/ J. Mol. Biol. / Flagellar rotation in the archaeon Halobacterium salinarum depends on ATP by Streif (2008)10.1128/JB.01061-09
/ J. Bacteriol. / Appendage-mediated surface adherence of Sulfolobus solfataricus by Zolghadr (2010)10.1002/j.1460-2075.1989.tb03418.x
/ EMBO J. / Methyl-accepting taxis proteins in Halobacterium halobium by Alam (1989)10.1046/j.1365-2958.1996.5371058.x
/ Mol. Microbiol. / Isolation and characterization of insertional mutations in flagellin genes in the archaeon Methanococcus voltae by Jarrell (1996)10.1128/jb.172.5.2328-2335.1990
/ J. Bacteriol. / Characterization of Halobacterium halobium mutants defective in taxis by Sundberg (1990)10.1128/JB.181.13.4020-4025.1999
/ J. Bacteriol. / Temperature-sensitive motility of Sulfolobus acidocaldarius influences population distribution in extreme environments by Lewus (1999)10.1371/journal.pone.0014104
/ PLoS ONE. / Crenarchaeal biofilm formation under extreme conditions by Koerdt (2010)10.1128/JB.00527-06
/ J. Bacteriol. / Flagella of Pyrococcus furiosus: multifunctional organelles, made for swimming, adhesion to various surfaces, and cell–cell contacts by Nather (2006)10.1007/s00203-008-0371-9
/ Arch. Microbiol. / An archaeal bi-species biofilm formed by Pyrococcus furiosus and Methanopyrus kandleri by Schopf (2008)10.1128/JB.00133-10
/ J. Bacteriol. / Haloferax volcanii flagella are required for motility but are not involved in PibD-dependent surface adhesion by Tripepi (2010)10.1128/aem.63.8.3158-3163.1997
/ Appl. Environ. Microbiol. / Stress-induced production of biofilm in the hyperthermophile Archaeoglobus fulgidus by Lapaglia (1997)
Dates
Type | When |
---|---|
Created | 14 years, 7 months ago (Jan. 26, 2011, 7:25 a.m.) |
Deposited | 3 years, 9 months ago (Nov. 18, 2021, 6:55 p.m.) |
Indexed | 4 weeks, 2 days ago (July 30, 2025, 10:47 a.m.) |
Issued | 14 years, 7 months ago (Jan. 19, 2011) |
Published | 14 years, 7 months ago (Jan. 19, 2011) |
Published Online | 14 years, 7 months ago (Jan. 19, 2011) |
Published Print | 14 years, 6 months ago (Feb. 1, 2011) |
@article{Ghosh_2011, title={Assembly and function of the archaeal flagellum}, volume={39}, ISSN={1470-8752}, url={http://dx.doi.org/10.1042/bst0390064}, DOI={10.1042/bst0390064}, number={1}, journal={Biochemical Society Transactions}, publisher={Portland Press Ltd.}, author={Ghosh, Abhrajyoti and Albers, Sonja-Verena}, year={2011}, month=jan, pages={64–69} }