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Orlandi, J. G., Soriano, J., Alvarez-Lacalle, E., Teller, S., & Casademunt, J. (2013). Noise focusing and the emergence of coherent activity in neuronal cultures. Nature Physics, 9(9), 582–590.

Authors 5
  1. Javier G. Orlandi (first)
  2. Jordi Soriano (additional)
  3. Enrique Alvarez-Lacalle (additional)
  4. Sara Teller (additional)
  5. Jaume Casademunt (additional)
References 50 Referenced 159
  1. Bullmore, E. & Sporns, O. Complex brain networks: Graph theoretical analysis of structural and functional systems. Nature Rev. Neurosci. 10, 186–198 (2009). (10.1038/nrn2575) / Nature Rev. Neurosci. by E Bullmore (2009)
  2. Chialvo, D. R. Emergent complex neural dynamics. Nature Phys. 6, 744–750 (2010). (10.1038/nphys1803) / Nature Phys. by DR Chialvo (2010)
  3. Spitzer, N. C. Electrical activity in early neuronal development. Nature 444, 707–712 (2006). (10.1038/nature05300) / Nature by NC Spitzer (2006)
  4. Blankenship, A. G. & Feller, M. B. Mechanisms underlying spontaneous patterned activity in developing neural circuits. Nature Rev. Neurosci. 11, 18–29 (2010). (10.1038/nrn2759) / Nature Rev. Neurosci. by AG Blankenship (2010)
  5. Buzsáki, G. & Draguhn, A. Neuronal oscillations in cortical networks. Science 304, 1926–1929 (2004). (10.1126/science.1099745) / Science by G Buzsáki (2004)
  6. Sanchez-Vives, M. V. & McCormick, D. A. Cellular and network mechanisms of rhythmic recurrent activity in neocortex. Nature Neurosci. 3, 1027–1034 (2000). (10.1038/79848) / Nature Neurosci. by MV Sanchez-Vives (2000)
  7. Ruiz-Mejias, M., Ciria-Suarez, L., Mattia, M. & Sanchez-Vives, M. V. Slow and fast rhythms generated in the cerebral cortex of the anesthetized mouse. J. Neurophysiol. 106, 2910–2921 (2011). (10.1152/jn.00440.2011) / J. Neurophysiol. by M Ruiz-Mejias (2011)
  8. Soto, F., Ma, X., Cecil, J. L., Vo, B. Q., Culican, S. M. & Kerschensteiner, D. Spontaneous activity promotes synapse formation in a cell-type-dependent manner in the developing retina. J. Neurosci. 32, 5426–5439 (2012). (10.1523/JNEUROSCI.0194-12.2012) / J. Neurosci. by F Soto (2012)
  9. Tscherter, A., Heuschkel, M. O., Renaud, P. & Streit, J. Spatiotemporal characterization of rhythmic activity in rat spinal cord slice cultures. Eur. J. Neurosci. 14, 179–190 (2001). (10.1046/j.0953-816x.2001.01635.x) / Eur. J. Neurosci. by A Tscherter (2001)
  10. Eckmann, J-P., Feinerman, O., Gruendlinger, L., Moses, E., Soriano, J. & Tlusty, T. The physics of living neural networks. Phys. Rep. 449, 54–76 (2007). (10.1016/j.physrep.2007.02.014) / Phys. Rep. by J-P Eckmann (2007)
  11. Levina, A., Herrmann, J. M. & Geisel, T. Dynamical synapses causing self-organized criticality in neural networks. Nature Phys. 3, 857–860 (2007). (10.1038/nphys758) / Nature Phys. by A Levina (2007)
  12. Soriano, J., Rodrı´guez Martı´nez, M., Tlusty, T. & Moses, E. Development of input connections in neural cultures. Proc. Natl Acad. Sci. USA 105, 13758–13763 (2008). (10.1073/pnas.0707492105) / Proc. Natl Acad. Sci. USA by J Soriano (2008)
  13. Feinerman, O., Rotem, A. & Moses, E. Reliable neuronal logic devices from patterned hippocampal cultures. Nature Phys. 4, 967–973 (2008). (10.1038/nphys1099) / Nature Phys. by O Feinerman (2008)
  14. Cohen, O., Keselman, A., Moses, E., Rodríguez Martínez, M., Soriano, J. & Tlusty, T. Quorum percolation in living neural networks. Europhys. Lett. 89, 18008 (2010). (10.1209/0295-5075/89/18008) / Europhys. Lett. by O Cohen (2010)
  15. Maeda, E., Robinson, H. P. & Kawana, A. The mechanisms of generation and propagation of synchronized bursting in developing networks of cortical neurons. J. Neurosci. 15, 6834–6845 (1995). (10.1523/JNEUROSCI.15-10-06834.1995) / J. Neurosci. by E Maeda (1995)
  16. Opitz, T., de Lima, A. D. & Voigt, T. Spontaneous development of synchronous oscillatory activity during maturation of cortical networks in vitro. J. Neurophysiol. 88, 2196–2206 (2002). (10.1152/jn.00316.2002) / J. Neurophysiol. by T Opitz (2002)
  17. Marom, S. & Shahaf, G. Development, learning and memory in large random networks of cortical neurons: Lessons beyond anatomy. Quart. Rev. Biophys. 35, 63–87 (2002). (10.1017/S0033583501003742) / Quart. Rev. Biophys. by S Marom (2002)
  18. Wagenaar, D. A., Pine, J. & Potter, S. M. An extremely rich repertoire of bursting patterns during the development of cortical cultures. BMC Neurosci. 7, 11 (2006). (10.1186/1471-2202-7-11) / BMC Neurosci. by DA Wagenaar (2006)
  19. Cohen, E., Ivenshitz, M., Amor-Baroukh, V., Greenberger, V. & Segal, M. Determinants of spontaneous activity in networks of cultured hippocampus. Brain Res. 1235, 21–30 (2008). (10.1016/j.brainres.2008.06.022) / Brain Res. by E Cohen (2008)
  20. Ham, M. I., Bettencourt, L. M., McDaniel, F. D. & Gross, G. W. Spontaneous coordinated activity in cultured networks: Analysis of multiple ignition sites, primary circuits, and burst phase delay distributions. J. Comput. Neurosci. 24, 346–357 (2008). (10.1007/s10827-007-0059-1) / J. Comput. Neurosci. by MI Ham (2008)
  21. Feinerman, O., Segal, M. & Moses, E. Identification and dynamics of spontaneous burst initiation zones in unidimensional neuronal cultures. J. Neurophysiol. 97, 2937–2948 (2007). (10.1152/jn.00958.2006) / J. Neurophysiol. by O Feinerman (2007)
  22. Eytan, D. & Marom, S. Dynamics and effective topology underlying synchronization in networks of cortical neurons. J. Neurosci. 26, 8465–8476 (2006). (10.1523/JNEUROSCI.1627-06.2006) / J. Neurosci. by D Eytan (2006)
  23. Eckmann, J-P., Jacobi, S., Marom, S., Moses, E. & Zbinden, C. Leader neurons in population bursts of 2D living neural networks. New J. Phys. 10, 5011 (2008). (10.1088/1367-2630/10/1/015011) / New J. Phys. by J-P Eckmann (2008)
  24. Eckmann, J-P., Moses, E., Stetter, O., Tlusty, T. & Zbinden, C. Leaders of neuronal cultures in a quorum percolation model. Front. Comput. Neurosci. 4, 132 (2010). (10.3389/fncom.2010.00132) / Front. Comput. Neurosci. by J-P Eckmann (2010)
  25. Segev, R., Baruchi, I., Hulata, E. & Ben-Jacob, E. Hidden neuronal correlations in cultured networks. Phys. Rev. Lett. 92, 118102 (2004). (10.1103/PhysRevLett.92.118102) / Phys. Rev. Lett. by R Segev (2004)
  26. Baruchi, I., Volman, V., Raichman, N., Shein, M. & Ben-Jacob, E. The emergence and properties of mutual synchronization in in vitro coupled cortical networks. Eur. J. Neurosci. 28, 1825–1835 (2008). (10.1111/j.1460-9568.2008.06487.x) / Eur. J. Neurosci. by I Baruchi (2008)
  27. Tabak, J. & Latham, P. E. Analysis of spontaneous bursting activity in random neural networks. Neuroreport 14, 1445–1449 (2003). (10.1097/00001756-200308060-00008) / Neuroreport by J Tabak (2003)
  28. Latham, P. E., Richmond, B. J., Nirenberg, S. & Nelson, P. G. Intrinsic dynamics in neuronal networks. II. Experiment. J. Neurophysiol. 83, 828–835 (2000). (10.1152/jn.2000.83.2.828) / J. Neurophysiol. by PE Latham (2000)
  29. Jacobi, S., Soriano, J. & Moses, E. BDNF and NT-3 increase velocity of activity front propagation in unidimensional hippocampal cultures. J. Neurophysiol. 104, 2932–2939 (2010). (10.1152/jn.00002.2010) / J. Neurophysiol. by S Jacobi (2010)
  30. Cohen, D. & Segal, M. Network bursts in hippocampal microcultures are terminated by exhaustion of vesicle pools. J. Neurophysiol. 106, 2314–2321 (2011). (10.1152/jn.00969.2010) / J. Neurophysiol. by D Cohen (2011)
  31. Shein, M., Volman, V., Raichman, N., Hanein, Y. & Ben-Jacob, E. Management of synchronized network activity by highly active neurons. Phys. Biol. 5, 036008 (2008). (10.1088/1478-3975/5/3/036008) / Phys. Biol. by M Shein (2008)
  32. Izhikevich, E. M. Simple model of spiking neurons. IEEE Trans. Neural Netw. 14, 1569–1572 (2003). (10.1109/TNN.2003.820440) / IEEE Trans. Neural Netw. by EM Izhikevich (2003)
  33. Alvarez-Lacalle, E. & Moses, E. Slow and fast pulses in 1-D cultures of excitatory neurons. J. Comput. Neurosci. 26, 475–493 (2009). (10.1007/s10827-008-0123-5) / J. Comput. Neurosci. by E Alvarez-Lacalle (2009)
  34. Beggs, J. M. & Plenz, D. Neuronal avalanches in neocortical circuits. J. Neurosci. 23, 11167–11177 (2003). (10.1523/JNEUROSCI.23-35-11167.2003) / J. Neurosci. by JM Beggs (2003)
  35. Beggs, J. M. & Plenz, D. Neuronal avalanches are diverse and precise activity patterns that are stable for many hours in cortical slice cultures. J. Neurosci. 24, 5216–5229 (2004). (10.1523/JNEUROSCI.0540-04.2004) / J. Neurosci. by JM Beggs (2004)
  36. Mazzoni, A., Broccard, F. D., Garcia-Perez, E., Bonifazi, P., Ruaro, M. E. & Torre, V. On the dynamics of the spontaneous activity in neuronal networks. PLoS ONE 2, e439 (2007). (10.1371/journal.pone.0000439) / PLoS ONE by A Mazzoni (2007)
  37. Tetzlaff, C., Okujeni, S., Egert, U., Wörgötter, F. & Butz, M. Self-organized criticality in developing neuronal networks. PLoS Comput. Biol. 6, e1001013 (2010). (10.1371/journal.pcbi.1001013) / PLoS Comput. Biol. by C Tetzlaff (2010)
  38. Levina, A., Herrmann, J. M. & Geisel, T. Phase transitions towards criticality in a neural system with adaptive interactions. Phys. Rev. Lett. 102, 118110 (2009). (10.1103/PhysRevLett.102.118110) / Phys. Rev. Lett. by A Levina (2009)
  39. Millman, D., Mihalas, S., Kirkwood, A. & Niebur, E. Self-organized criticality occurs in non-conservative neuronal networks during ‘up’ states. Nature Phys. 6, 801–805 (2010). (10.1038/nphys1757) / Nature Phys. by D Millman (2010)
  40. Albert, R. & Barabási, A-L. Statistical mechanics of complex networks. Rev. Mod. Phys. 74, 47–97 (2002). (10.1103/RevModPhys.74.47) / Rev. Mod. Phys. by R Albert (2002)
  41. Tlusty, T. & Eckmann, J-P. Remarks on bootstrap percolation in metric networks. J. Phys. A 42, 205004 (2009). (10.1088/1751-8113/42/20/205004) / J. Phys. A by T Tlusty (2009)
  42. Ito, S., Hansen, M. E., Heiland, R., Lumsdaine, A., Litke, A. M. & Beggs, J. M. Extending transfer entropy improves identification of effective connectivity in a spiking cortical network model. PLoS ONE 6, e27431 (2011). (10.1371/journal.pone.0027431) / PLoS ONE by S Ito (2011)
  43. Stetter, O., Battaglia, D., Soriano, J. & Geisel, T. Model-free reconstruction of excitatory neuronal connectivity from calcium imaging signals. PLoS Comput. Biol. 8, e1002653 (2012). / PLoS Comput. Biol. by O Stetter (2012)
  44. Moons, W. G., Mackie, D. M. & Garcia-Marques, T. The impact of repetition-induced familiarity on agreement with weak and strong arguments. J. Pers. Soc. Psychol. 96, 32–44 (2009). (10.1037/a0013461) / J. Pers. Soc. Psychol. by WG Moons (2009)
  45. Kitsak, M., Gallos, L. K., Havlin, S., Liljeros, F., Muchnik, L., Stanley, H. E. & Makse, H. A. Identification of influential spreaders in complex networks. Nature Phys. 6, 888–893 (2010). (10.1038/nphys1746) / Nature Phys. by M Kitsak (2010)
  46. Fagiolo, G. Clustering in complex directed networks. Phys. Rev. E 76, 26107 (2007). (10.1103/PhysRevE.76.026107) / Phys. Rev. E by G Fagiolo (2007)
  47. Bastian, M., Heymann, S. & Jacomy, M. Gephi: An open source software for exploring and manipulating networks. Int. AAAI Conf. on Weblogs and Social Media (2009). (10.1609/icwsm.v3i1.13937)
  48. Golomb, D. & Amitai, Y. Propagating neuronal discharges in neocortical slices: computational and experimental study. J. Neurophysiol. 78, 1199–1211 (1997). (10.1152/jn.1997.78.3.1199) / J. Neurophysiol. by D Golomb (1997)
  49. Tsodyks, M. V. & Markram, H. The neural code between neocortical pyramidal neurons depends on neurotransmitter release probability. Proc. Natl Acad. Sci. USA 94, 719–723 (1997). / Proc. Natl Acad. Sci. USA by MV Tsodyks (1997)
  50. Blondel, V. D., Guillaume, J-L., Lambiotte, R. & Lefebvre, E. Fast unfolding of communities in large networks. J. Stat. Mech. 10, 008 (2008). / J. Stat. Mech. by VD Blondel (2008)
Dates
Type When
Created 12 years, 1 month ago (July 19, 2013, 11:48 a.m.)
Deposited 2 years, 1 month ago (July 3, 2023, 5:56 a.m.)
Indexed 1 month ago (July 20, 2025, 12:27 a.m.)
Issued 12 years, 1 month ago (July 21, 2013)
Published 12 years, 1 month ago (July 21, 2013)
Published Online 12 years, 1 month ago (July 21, 2013)
Published Print 11 years, 11 months ago (Sept. 1, 2013)
Funders 0

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@article{Orlandi_2013, title={Noise focusing and the emergence of coherent activity in neuronal cultures}, volume={9}, ISSN={1745-2481}, url={http://dx.doi.org/10.1038/nphys2686}, DOI={10.1038/nphys2686}, number={9}, journal={Nature Physics}, publisher={Springer Science and Business Media LLC}, author={Orlandi, Javier G. and Soriano, Jordi and Alvarez-Lacalle, Enrique and Teller, Sara and Casademunt, Jaume}, year={2013}, month=jul, pages={582–590} }