Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions
10.1038/ng1891
Crossref journal-article
Springer Science and Business Media LLC
Nature Genetics (297)
Bibliography

Zhao, Z., Tavoosidana, G., Sjölinder, M., Göndör, A., Mariano, P., Wang, S., Kanduri, C., Lezcano, M., Singh Sandhu, K., Singh, U., Pant, V., Tiwari, V., Kurukuti, S., & Ohlsson, R. (2006). Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions. Nature Genetics, 38(11), 1341–1347.

Authors 14
  1. Zhihu Zhao (first)
  2. Gholamreza Tavoosidana (additional)
  3. Mikael Sjölinder (additional)
  4. Anita Göndör (additional)
  5. Piero Mariano (additional)
  6. Sha Wang (additional)
  7. Chandrasekhar Kanduri (additional)
  8. Magda Lezcano (additional)
  9. Kuljeet Singh Sandhu (additional)
  10. Umashankar Singh (additional)
  11. Vinod Pant (additional)
  12. Vijay Tiwari (additional)
  13. Sreenivasulu Kurukuti (additional)
  14. Rolf Ohlsson (additional)
References 19 Referenced 804
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  2. Osborne, C.S. et al. Active genes dynamically colocalize to shared sites of ongoing transcription. Nat. Genet. 36, 1065–1071 (2004). (10.1038/ng1423) / Nat. Genet. by CS Osborne (2004)
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  5. Dekker, J. The three 'C's of chromosome conformation capture: controls, controls, controls. Nat Methods. 3, 17–21 (2005). (10.1038/nmeth823) / Nat Methods. by J Dekker (2005)
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  7. Kurukuti, S. et al. CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2. Proc. Natl. Acad. Sci. USA 103, 10684–10689 (2006). (10.1073/pnas.0600326103) / Proc. Natl. Acad. Sci. USA by S Kurukuti (2006)
  8. Dean, W. et al. Altered imprinted gene methylation and expression in completely ES cell-derived mouse fetuses: association with abberant phenotypes. Development 125, 2273–2282 (1998). (10.1242/dev.125.12.2273) / Development by W Dean (1998)
  9. Pant, V. et al. The nucleotides responsible for the direct physical contact between the chromatin insulator protein CTCF and the H19 imprinting control region manifest parent of origin-specific long-distance insulation and methylation-free domains. Genes Dev. 17, 586–590 (2003). (10.1101/gad.254903) / Genes Dev. by V Pant (2003)
  10. Tolhuis, B., Palstra, R., Splinter, E., Grosveld, F. & de Laat, W. Looping and interaction between hypersensitive sites in the active beta-globin locus. Mol. Cell 10, 1453–1465 (2002). (10.1016/S1097-2765(02)00781-5) / Mol. Cell by B Tolhuis (2002)
  11. Luedi, P., Hartemink, A. & Jirtle, R. Genome-wide prediction of imprinted murine genes. Genome Res. 15, 875–884 (2005). (10.1101/gr.3303505) / Genome Res. by P Luedi (2005)
  12. Okamura, K., Yamada, Y., Sakaki, Y. & Ito, T. An evolutionary scenario for genomic imprinting of Impact lying between nonimprinted neighbors. DNA Res. 11, 381–390 (2004). (10.1093/dnares/11.6.381) / DNA Res. by K Okamura (2004)
  13. Massey, J.B. Membrane and protein interactions of oxysterols. Curr. Opin. Lipidol. 17, 296–301 (2006). (10.1097/01.mol.0000226123.17629.ab) / Curr. Opin. Lipidol. by JB Massey (2006)
  14. Ling, J. et al. CTCF mediates interchromosomal interactions between Igf2/H19 and Wsb1/Nf1. Science 312, 269–272 (2006). (10.1126/science.1123191) / Science by J Ling (2006)
  15. Wurtele, H. & Chartrand, P. Genome-wide scanning of HoxB1-associated loci in mouse ES cells using an open-ended chromosome conformation capture methodology. Chromosome Res. 14, 477–495 (2006). (10.1007/s10577-006-1075-0) / Chromosome Res. by H Wurtele (2006)
  16. Ohlsson, R., Paldi, A. & Graves, J.M. Did genomic imprinting and X inactivation arise from stochastic expression? Trends Genet. 17, 136–141 (2001). (10.1016/S0168-9525(00)02211-3) / Trends Genet. by R Ohlsson (2001)
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  18. Sakatani, T. et al. Loss of imprinting of Igf2 alters intestinal maturation and tumorigenesis in mice. Science 307, 1976–1978 (2005). (10.1126/science.1108080) / Science by T Sakatani (2005)
  19. Bacher, C.P. et al. Transient colocalization of X-inactivation centres accompanies the initiation of X inactivation. Nat. Cell Biol. 8, 293–299 (2006). (10.1038/ncb1365) / Nat. Cell Biol. by CP Bacher (2006)
Dates
Type When
Created 18 years, 10 months ago (Oct. 10, 2006, 12:04 p.m.)
Deposited 2 years, 3 months ago (May 18, 2023, 6:12 p.m.)
Indexed 1 day, 18 hours ago (Aug. 29, 2025, 6:18 a.m.)
Issued 18 years, 10 months ago (Oct. 8, 2006)
Published 18 years, 10 months ago (Oct. 8, 2006)
Published Online 18 years, 10 months ago (Oct. 8, 2006)
Published Print 18 years, 9 months ago (Nov. 1, 2006)
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@article{Zhao_2006, title={Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions}, volume={38}, ISSN={1546-1718}, url={http://dx.doi.org/10.1038/ng1891}, DOI={10.1038/ng1891}, number={11}, journal={Nature Genetics}, publisher={Springer Science and Business Media LLC}, author={Zhao, Zhihu and Tavoosidana, Gholamreza and Sjölinder, Mikael and Göndör, Anita and Mariano, Piero and Wang, Sha and Kanduri, Chandrasekhar and Lezcano, Magda and Singh Sandhu, Kuljeet and Singh, Umashankar and Pant, Vinod and Tiwari, Vijay and Kurukuti, Sreenivasulu and Ohlsson, Rolf}, year={2006}, month=oct, pages={1341–1347} }