DOI: 10.1038/ncb1991. A subdomain of the endoplasmic reticulum forms a cradle for autophagosome formation

A subdomain of the endoplasmic reticulum forms a cradle for autophagosome formation

10.1038/ncb1991

Crossref journal-article

Springer Science and Business Media LLC

Nature Cell Biology (297)

Bibliography

Hayashi-Nishino, M., Fujita, N., Noda, T., Yamaguchi, A., Yoshimori, T., & Yamamoto, A. (2009). A subdomain of the endoplasmic reticulum forms a cradle for autophagosome formation. Nature Cell Biology, 11(12), 1433â1437.

Authors 6

Mitsuko Hayashi-Nishino (first)
Naonobu Fujita (additional)
Takeshi Noda (additional)
Akihito Yamaguchi (additional)
Tamotsu Yoshimori (additional)
Akitsugu Yamamoto (additional)

References 22 Referenced 889

Mizushima, N. Autophagy: process and function. Genes Dev. 21, 2861–2873 (2007). (10.1101/gad.1599207) / Genes Dev. by N Mizushima (2007)
Suzuki, K. & Ohsumi, Y. Molecular machinery of autophagosome formation in yeast, Saccharomyces cerevisiae. FEBS Lett. 581, 2156–2161 (2007). (10.1016/j.febslet.2007.01.096) / FEBS Lett. by K Suzuki (2007)
Yoshimori, T. & Noda, T. Toward unraveling membrane biogenesis in mammalian autophagy. Curr. Opin. Cell Biol. 20, 401–407 (2008). (10.1016/j.ceb.2008.03.010) / Curr. Opin. Cell Biol. by T Yoshimori (2008)
Juhasz, G. & Neufeld, T. P. Autophagy: a forty-year search for a missing membrane source. PLoS Biol. 4, e36 (2006). (10.1371/journal.pbio.0040036) / PLoS Biol. by G Juhasz (2006)
Dunn, W.A. Jr Autophagy and related mechanisms of lysosome-mediated protein degradation. Trends Cell Biol. 4, 139–143 (1994). (10.1016/0962-8924(94)90069-8) / Trends Cell Biol. by WA Dunn Jr (1994)
Furuno, K. et al. Immunocytochemical study of the surrounding envelope of autophagic vacuoles in cultured rat hepatocytes. Exp. Cell Res. 189, 261–268 (1990). (10.1016/0014-4827(90)90245-6) / Exp. Cell Res. by K Furuno (1990)
Yamamoto, A., Masaki, R., Fukui, Y. & Tashiro, Y. Absence of cytochrome P-450 and presence of autolysosomal membrane antigens on the isolation membranes and autophagosomal membranes in rat hepatocytes. J. Histochem. Cytochem. 38, 1571–1581 (1990). (10.1177/38.11.2212617) / J. Histochem. Cytochem. by A Yamamoto (1990)
Yamamoto, A., Masaki, R. & Tashiro, Y. Characterization of the isolation membranes and the limiting membranes of autophagosomes in rat hepatocytes by lectin cytochemistry. J. Histochem. Cytochem. 38, 573–580 (1990). (10.1177/38.4.2319125) / J. Histochem. Cytochem. by A Yamamoto (1990)
Kovacs, A. L., Palfia, Z., Rez, G., Vellai, T. & Kovacs, J. Sequestration revisited: integrating traditional electron microscopy, de novo assembly and new results. Autophagy 3, 655–662 (2007). (10.4161/auto.4590) / Autophagy by AL Kovacs (2007)
Axe, E. L. et al. Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum. J. Cell Biol. 182, 685–701 (2008). (10.1083/jcb.200803137) / J. Cell Biol. by EL Axe (2008)
Walker, S., Chandra, P., Manifava, M., Axe, E. & Ktistakis, N. T. Making autophagosomes: localized synthesis of phosphatidylinositol 3-phosphate holds the clue. Autophagy 4, 1093–1096 (2008). (10.4161/auto.7141) / Autophagy by S Walker (2008)
Fujita, N. et al. An Atg4B mutant hampers the lipidation of LC3 paralogues and causes defects in autophagosome closure. Mol. Biol. Cell 19, 4651–4659 (2008). (10.1091/mbc.e08-03-0312) / Mol. Biol. Cell by N Fujita (2008)
Fengsrud, M. et al. Ultrastructural and immunocytochemical characterization of autophagic vacuoles in isolated hepatocytes: effects of vinblastine and asparagine on vacuole distributions. Exp. Cell Res. 221, 504–519 (1995). (10.1006/excr.1995.1402) / Exp. Cell Res. by M Fengsrud (1995)
Mizushima, N. et al. Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells. J. Cell Biol. 152, 657–668 (2001). (10.1083/jcb.152.4.657) / J. Cell Biol. by N Mizushima (2001)
Mizushima, N. et al. Mouse Apg16L, a novel WD-repeat protein, targets to the autophagic isolation membrane with the Apg12–Apg5 conjugate. J. Cell Sci. 116, 1679–1688 (2003). (10.1242/jcs.00381) / J. Cell Sci. by N Mizushima (2003)
Saitoh, T. et al. Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1β production. Nature 456, 264–268 (2008). (10.1038/nature07383) / Nature by T Saitoh (2008)
McIntosh, R., Nicastro, D. & Mastronarde, D. New views of cells in 3D: an introduction to electron tomography. Trends Cell Biol. 15, 43–51 (2005). (10.1016/j.tcb.2004.11.009) / Trends Cell Biol. by R McIntosh (2005)
Bannykh, S. I., Rowe, T. & Balch, W. E. The organization of endoplasmic reticulum export complexes. J. Cell Biol. 135, 19–35 (1996). (10.1083/jcb.135.1.19) / J. Cell Biol. by SI Bannykh (1996)
Saitoh, T. et al. TWEAK induces NF-kappaB2 p100 processing and long lasting NF-kappaB activation. J. Biol. Chem. 278, 36005–36012 (2003). (10.1074/jbc.M304266200) / J. Biol. Chem. by T Saitoh (2003)
Mastronarde, D. N. Dual-axis tomography: an approach with alignment methods that preserve resolution. J. Struct. Biol. 120, 343–352 (1997). (10.1006/jsbi.1997.3919) / J. Struct. Biol. by DN Mastronarde (1997)
Kremer, J. R., Mastronarde, D. N. & McIntosh, J. R. Computer visualization of three-dimensional image data using IMOD. J. Struct. Biol. 116, 71–76 (1996). (10.1006/jsbi.1996.0013) / J. Struct. Biol. by JR Kremer (1996)
Wakana, Y. et al. Bap31 is an itinerant protein that moves between the peripheral endoplasmic reticulum (ER) and a juxtanuclear compartment related to ER-associated Degradation. Mol. Biol. Cell 19, 1825–1836 (2008). (10.1091/mbc.e07-08-0781) / Mol. Biol. Cell by Y Wakana (2008)

Dates

Type	When
Created	15 years, 9 months ago (Nov. 8, 2009, 1:05 p.m.)
Deposited	2 years, 3 months ago (May 18, 2023, 3:33 p.m.)
Indexed	3 days, 1 hour ago (Sept. 3, 2025, 6:40 a.m.)
Issued	15 years, 9 months ago (Nov. 8, 2009)
Published	15 years, 9 months ago (Nov. 8, 2009)
Published Online	15 years, 9 months ago (Nov. 8, 2009)
Published Print	15 years, 9 months ago (Dec. 1, 2009)

Funders 0

None

BibTeX

@article{Hayashi_Nishino_2009, title={A subdomain of the endoplasmic reticulum forms a cradle for autophagosome formation}, volume={11}, ISSN={1476-4679}, url={http://dx.doi.org/10.1038/ncb1991}, DOI={10.1038/ncb1991}, number={12}, journal={Nature Cell Biology}, publisher={Springer Science and Business Media LLC}, author={Hayashi-Nishino, Mitsuko and Fujita, Naonobu and Noda, Takeshi and Yamaguchi, Akihito and Yoshimori, Tamotsu and Yamamoto, Akitsugu}, year={2009}, month=nov, pages={1433–1437} }

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