Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture
10.1038/nbt993
Crossref journal-article
Springer Science and Business Media LLC
Nature Biotechnology (297)
Bibliography

Durr, E., Yu, J., Krasinska, K. M., Carver, L. A., Yates, J. R., Testa, J. E., Oh, P., & Schnitzer, J. E. (2004). Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture. Nature Biotechnology, 22(8), 985–992.

Authors 8
  1. Eberhard Durr (first)
  2. Jingyi Yu (additional)
  3. Karolina M Krasinska (additional)
  4. Lucy A Carver (additional)
  5. John R Yates (additional)
  6. Jacqueline E Testa (additional)
  7. Phil Oh (additional)
  8. Jan E Schnitzer (additional)
References 39 Referenced 364
  1. Schnitzer, J.E. Update on the cellular and molecular basis of capillary permeability. Trends Cardiovasc. Med. 3, 124–130 (1993). (10.1016/1050-1738(93)90012-U) / Trends Cardiovasc. Med. by JE Schnitzer (1993)
  2. Michiels, C. Endothelial cell functions. J. Cell. Physiol. 196, 430–443 (2003). (10.1002/jcp.10333) / J. Cell. Physiol. by C Michiels (2003)
  3. Madri, J.A. & Williams, S.K. Capillary endothelial cell culture: Phenotype modulation by matrix components. J. Cell Biol. 97, 153–165 (1983). (10.1083/jcb.97.1.153) / J. Cell Biol. by JA Madri (1983)
  4. Goerdt, S. et al. Characterization and differential expression of an endothelial cell- specific surface antigen in continuous and sinusoidal endothelial, in skin vascular lesions and in vitro. Exp. Cell Biol. 57, 185–192 (1989). / Exp. Cell Biol. by S Goerdt (1989)
  5. Gumkowski, F., Kaminska, G., Kaminski, M., Morrissey, L.W. & Auerbach, R. Heterogeneity of mouse vascular endothelium. Blood Vessels 24, 11–23 (1987). / Blood Vessels by F Gumkowski (1987)
  6. Aird, W.C. et al. Vascular bed-specific expression of an endothelial cell gene is programmed by the tissue microenvironment. J. Cell Biol. 138, 1117–1124 (1997). (10.1083/jcb.138.5.1117) / J. Cell Biol. by WC Aird (1997)
  7. Janzer, R.C. & Raff, M.C. Astrocytes induce blood-brain barrier properties in endothelial cells. Nature 325, 253–257 (1987). (10.1038/325253a0) / Nature by RC Janzer (1987)
  8. Stewart, P.A. & Wiley, M.J. Developing nervous tissue induces formation of blood-brain barrier characteristics in invading endothelial cells: a study using quail-chick transplantation chimeras. Dev. Biol. 84, 183–192 (1981). (10.1016/0012-1606(81)90382-1) / Dev. Biol. by PA Stewart (1981)
  9. Auerbach, R., Alby, L., Morrissey, L.W., Tu, M. & Joseph, J. Expression of organ-specific antigens on capillary endothelial cells. Microvasc. Res. 29, 401–411 (1985). (10.1016/0026-2862(85)90028-7) / Microvasc. Res. by R Auerbach (1985)
  10. St. Croix, B. et al. Genes expressed in human tumor endothelium. Science 289, 1197–1202 (2000). (10.1126/science.289.5482.1197) / Science by B St. Croix (2000)
  11. Obermeyer, N., Janson, N., Bergmann, J., Buck, F. & Ito, W.D. Proteome analysis of migrating versus nonmigrating rat heart endothelial cells reveals distinct expression patterns. Endothelium 10, 167–178 (2003). (10.1080/10623320390233481) / Endothelium by N Obermeyer (2003)
  12. Bruneel, A. et al. Proteomic study of human umbilical vein endothelial cells in culture. Proteomics 3, 714–723 (2003). (10.1002/pmic.200300409) / Proteomics by A Bruneel (2003)
  13. Pasqualini, R. & Ruoslahti, E. Organ targeting in vivo using phage display peptide libraries. Nature 380, 364–366 (1996). (10.1038/380364a0) / Nature by R Pasqualini (1996)
  14. Rajotte, D. et al. Molecular heterogeneity of the vascular endothelium revealed by in vivo phage display. J. Clin. Invest. 102, 430–437 (1998). (10.1172/JCI3008) / J. Clin. Invest. by D Rajotte (1998)
  15. Schnitzer, J.E., McIntosh, D.P., Dvorak, A.M., Liu, J. & Oh, P. Separation of caveolae from associated microdomains of GPI-anchored proteins. Science 269, 1435–1439 (1995). (10.1126/science.7660128) / Science by JE Schnitzer (1995)
  16. Oh, P. & Schnitzer, J.E. Isolation and subfractionation of plasma membranes to purify caveolae seperately from glycosyl-phosphatidylinositol-anchored protein microdomain in Cell Biology: A Laboratory Handbook, vol. 2 (ed. Celis, J..) 34–45 (Academic Press, Orlando, 1998). / Cell Biology: A Laboratory Handbook by P Oh (1998)
  17. Rizzo, V., Morton, C., DePaola, N., Schnitzer, J.E. & Davies, P.F. Recruitment of endothelial caveolae into mechanotransduction pathways by flow conditioning in vitro. Am. J. Physiol. Heart Circ. Physiol. 285, H1720–H1729 (2003). (10.1152/ajpheart.00344.2002) / Am. J. Physiol. Heart Circ. Physiol. by V Rizzo (2003)
  18. Schnitzer, J.E., Liu, J. & Oh, P. Endothelial caveolae have the molecular transport machinery for vesicle budding, docking, and fusion including VAMP, NSF, SNAP, annexins, and GTPases. J. Biol. Chem. 270, 14399–14404 (1995). (10.1074/jbc.270.24.14399) / J. Biol. Chem. by JE Schnitzer (1995)
  19. Schnitzer, J.E. & Oh, P. Aquaporin-1 in plasma membrane and caveolae provides mercury-sensitive water channels across lung endothelium. Am. J. Physiol. 270, H416–H422 (1996). / Am. J. Physiol. by JE Schnitzer (1996)
  20. Schnitzer, J.E. & Oh, P. Antibodies to SPARC inhibit albumin binding to SPARC, gp60, and microvascular endothelium. Am. J. Physiol. 263, H1872–H1879 (1992). / Am. J. Physiol. by JE Schnitzer (1992)
  21. Wolters, D.A., Washburn, M.P. & Yates, J.R., III. An automated multidimensional protein identification technology for shotgun proteomics. Anal. Chem. 73, 5683–5690 (2001). (10.1021/ac010617e) / Anal. Chem. by DA Wolters (2001)
  22. Jeffries, W.A. et al. Transferrin receptor on endothelium of brain capillaries. Nature 312, 162–163 (1984). (10.1038/312162a0) / Nature by WA Jeffries (1984)
  23. Schnitzer, J.E. & Oh, P. Albondin-mediated capillary permeability to albumin. Differential role of receptors in endothelial transcytosis and endocytosis of native and modified albumins. J. Biol. Chem. 269, 6072–6082 (1994). (10.1016/S0021-9258(17)37571-3) / J. Biol. Chem. by JE Schnitzer (1994)
  24. Schnitzer, J.E. gp60 is an albumin-binding glycoprotein expressed by continuous endothelium involved in albumin transcytosis. Am. J. Physiol. 262, H246–H254 (1992). / Am. J. Physiol. by JE Schnitzer (1992)
  25. Christian, S. et al. Nucleolin expressed at the cell surface is a marker of endothelial cells in angiogenic blood vessels. J. Cell Biol. 163, 871–878 (2003). (10.1083/jcb.200304132) / J. Cell Biol. by S Christian (2003)
  26. Negrutskii, B.S. & El'skaya, A.V. Eukaryotic translation elongation factor 1 alpha: structure, expression, functions, and possible role in aminoacyl-tRNA channeling. Prog. Nucleic Acid Res. Mol. Biol. 60, 47–78 (1998). (10.1016/S0079-6603(08)60889-2) / Prog. Nucleic Acid Res. Mol. Biol. by BS Negrutskii (1998)
  27. Honscha, W., Ottallah, M., Kistner, A., Platte, H. & Petzinger, E. A membrane-bound form of protein disulfide isomerase (PDI) and the hepatic uptake of organic anions. Biochim. Biophys. Acta 1153, 175–183 (1993). (10.1016/0005-2736(93)90403-M) / Biochim. Biophys. Acta by W Honscha (1993)
  28. Hebert, C. et al. Cell surface colligin/Hsp47 associates with tetraspanin protein CD9 in epidermoid carcinoma cell lines. J. Cell. Biochem. 73, 248–258 (1999). (10.1002/(SICI)1097-4644(19990501)73:2<248::AID-JCB11>3.0.CO;2-A) / J. Cell. Biochem. by C Hebert (1999)
  29. Schnitzer, J. The endothelial cell surface and caveolae in health and disease. in Vascular Endothelium: Physiology, Pathology and Therapeutic Opportunities (eds. Born, G.V.R. & Schwartz, C.J.) 77–95 (1997). / Vascular Endothelium: Physiology, Pathology and Therapeutic Opportunities by J Schnitzer (1997)
  30. Washburn, M.P., Wolters, D. & Yates, J.R. III. Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat. Biotechnol. 19, 242–247 (2001). (10.1038/85686) / Nat. Biotechnol. by MP Washburn (2001)
  31. McIntosh, D.P., Tan, X.Y., Oh, P. & Schnitzer, J.E. Targeting endothelium and its dynamic caveolae for tissue-specific transcytosis in vivo: a pathway to overcome cell barriers to drug and gene delivery. Proc. Natl. Acad. Sci. USA 99, 1996–2001 (2002). (10.1073/pnas.251662398) / Proc. Natl. Acad. Sci. USA by DP McIntosh (2002)
  32. Carver, L.A. & Schnitzer, J.E. Caveolae: mining little caves for new cancer targets. Nat. Rev. Cancer 3, 571–581 (2003). (10.1038/nrc1146) / Nat. Rev. Cancer by LA Carver (2003)
  33. Weinman, E.J., Steplock, D. & Shenolikar, S. Acute regulation of NHE3 by protein kinase A requires a multiprotein signal complex. Kidney Int. 60, 450–454 (2001). (10.1046/j.1523-1755.2001.060002450.x) / Kidney Int. by EJ Weinman (2001)
  34. Abe, J., Suzuki, H., Notoya, M., Yamamoto, T. & Hirose, S. Ig-hepta, a novel member of the G protein-coupled hepta-helical receptor (GPCR) family that has immunoglobulin-like repeats in a long N-terminal extracellular domain and defines a new subfamily of GPCRs. J. Biol. Chem. 274, 19957–19964 (1999). (10.1074/jbc.274.28.19957) / J. Biol. Chem. by J Abe (1999)
  35. van der Merwe, P.A. et al. The NH2-terminal domain of rat CD2 binds rat CD48 with a low affinity and binding does not require glycosylation of CD2. Eur. J. Immunol. 23, 1373–1377 (1993). (10.1002/eji.1830230628) / Eur. J. Immunol. by PA van der Merwe (1993)
  36. Magee, J.C., Stone, A.E., Oldham, K.T. & Guice, K.S. Isolation, culture, and characterization of rat lung microvascular endothelial cells. Am. J. Physiol. 267, L433–L441 (1994). / Am. J. Physiol. by JC Magee (1994)
  37. Link, A.J. et al. Direct analysis of protein complexes using mass spectrometry. Nat. Biotechnol. 17, 676–682 (1999). (10.1038/10890) / Nat. Biotechnol. by AJ Link (1999)
  38. Eng, J. & McCormac, A. & Yates, J.R. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J. Am. Soc. Mass Spectrom. 5, 976–989 (1994). (10.1016/1044-0305(94)80016-2) / J. Am. Soc. Mass Spectrom. by J Eng (1994)
  39. Tabb, D.L., McDonald, W.H. & Yates, J.R. III. DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics. J. Proteome Res. 1, 21–26 (2002). (10.1021/pr015504q) / J. Proteome Res. by DL Tabb (2002)
Dates
Type When
Created 21 years, 1 month ago (July 18, 2004, 1:12 p.m.)
Deposited 2 years, 3 months ago (May 18, 2023, 3:58 p.m.)
Indexed 4 days, 22 hours ago (Aug. 31, 2025, 7:26 p.m.)
Issued 21 years, 1 month ago (July 18, 2004)
Published 21 years, 1 month ago (July 18, 2004)
Published Online 21 years, 1 month ago (July 18, 2004)
Published Print 21 years, 1 month ago (Aug. 1, 2004)
Funders 0

None

@article{Durr_2004, title={Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture}, volume={22}, ISSN={1546-1696}, url={http://dx.doi.org/10.1038/nbt993}, DOI={10.1038/nbt993}, number={8}, journal={Nature Biotechnology}, publisher={Springer Science and Business Media LLC}, author={Durr, Eberhard and Yu, Jingyi and Krasinska, Karolina M and Carver, Lucy A and Yates, John R and Testa, Jacqueline E and Oh, Phil and Schnitzer, Jan E}, year={2004}, month=jul, pages={985–992} }