ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression
10.1038/nature04835
Crossref journal-article
Springer Science and Business Media LLC
Nature (297)
Bibliography

Shi, X., Hong, T., Walter, K. L., Ewalt, M., Michishita, E., Hung, T., Carney, D., Peña, P., Lan, F., Kaadige, M. R., Lacoste, N., Cayrou, C., Davrazou, F., Saha, A., Cairns, B. R., Ayer, D. E., Kutateladze, T. G., Shi, Y., Côté, J., … Gozani, O. (2006). ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression. Nature, 442(7098), 96–99.

Authors 21
  1. Xiaobing Shi (first)
  2. Tao Hong (additional)
  3. Kay L. Walter (additional)
  4. Mark Ewalt (additional)
  5. Eriko Michishita (additional)
  6. Tiffany Hung (additional)
  7. Dylan Carney (additional)
  8. Pedro Peña (additional)
  9. Fei Lan (additional)
  10. Mohan R. Kaadige (additional)
  11. Nicolas Lacoste (additional)
  12. Christelle Cayrou (additional)
  13. Foteini Davrazou (additional)
  14. Anjanabha Saha (additional)
  15. Bradley R. Cairns (additional)
  16. Donald E. Ayer (additional)
  17. Tatiana G. Kutateladze (additional)
  18. Yang Shi (additional)
  19. Jacques Côté (additional)
  20. Katrin F. Chua (additional)
  21. Or Gozani (additional)
References 23 Referenced 721
  1. Jenuwein, T. & Allis, C. D. Translating the histone code. Science 293, 1074–1080 (2001) (10.1126/science.1063127) / Science by T Jenuwein (2001)
  2. Kurdistani, S. K. & Grunstein, M. Histone acetylation and deacetylation in yeast. Nature Rev. Mol. Cell Biol. 4, 276–284 (2003) (10.1038/nrm1075) / Nature Rev. Mol. Cell Biol. by SK Kurdistani (2003)
  3. Schneider, R. et al. Histone H3 lysine 4 methylation patterns in higher eukaryotic genes. Nature Cell Biol. 6, 73–77 (2004) (10.1038/ncb1076) / Nature Cell Biol. by R Schneider (2004)
  4. Bernstein, B. E. et al. Genomic maps and comparative analysis of histone modifications in human and mouse. Cell 120, 169–181 (2005) (10.1016/j.cell.2005.01.001) / Cell by BE Bernstein (2005)
  5. Bannister, A. J. & Kouzarides, T. Histone methylation: recognizing the methyl mark. Methods Enzymol. 376, 269–288 (2004) (10.1016/S0076-6879(03)76018-2) / Methods Enzymol. by AJ Bannister (2004)
  6. Doyon, Y. et al. ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation. Mol. Cell 21, 51–64 (2006) (10.1016/j.molcel.2005.12.007) / Mol. Cell by Y Doyon (2006)
  7. Gozani, O. et al. The PHD finger of the chromatin-associated protein ING2 functions as a nuclear phosphoinositide receptor. Cell 114, 99–111 (2003) (10.1016/S0092-8674(03)00480-X) / Cell by O Gozani (2003)
  8. Zimmermann, P. et al. PIP2–PDZ domain binding controls the association of syntenin with the plasma membrane. Mol. Cell 9, 1215–1225 (2002) (10.1016/S1097-2765(02)00549-X) / Mol. Cell by P Zimmermann (2002)
  9. Stolt, P. C. et al. Origins of peptide selectivity and phosphoinositide binding revealed by structures of disabled-1 PTB domain complexes. Structure (Camb.) 11, 569–579 (2003) (10.1016/S0969-2126(03)00068-6) / Structure (Camb.) by PC Stolt (2003)
  10. Ragvin, A. et al. Nucleosome binding by the bromodomain and PHD finger of the transcriptional cofactor p300. J. Mol. Biol. 337, 773–788 (2004) (10.1016/j.jmb.2004.01.051) / J. Mol. Biol. by A Ragvin (2004)
  11. Eberharter, A., Vetter, I., Ferreira, R. & Becker, P. B. ACF1 improves the effectiveness of nucleosome mobilization by ISWI through PHD–histone contacts. EMBO J. 23, 4029–4039 (2004) (10.1038/sj.emboj.7600382) / EMBO J. by A Eberharter (2004)
  12. Peña, P. V. et al. Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2. Nature advance online publication, doi:10.1038/nature04814 (21 May 2006). (10.1038/nature04814)
  13. Wang, H. et al. Purification and functional characterization of a histone H3-lysine 4-specific methyltransferase. Mol. Cell 8, 1207–1217 (2001) (10.1016/S1097-2765(01)00405-1) / Mol. Cell by H Wang (2001)
  14. Shi, Y. et al. Histone demethylation mediated by the nuclear amine oxidase homolog LSD1. Cell 119, 941–953 (2004) (10.1016/j.cell.2004.12.012) / Cell by Y Shi (2004)
  15. Ricke, R. M. & Bielinsky, A. K. Easy detection of chromatin binding proteins by the Histone Association Assay. Biol. Proced. Online 7, 60–69 (2005) (10.1251/bpo106) / Biol. Proced. Online by RM Ricke (2005)
  16. Wysocka, J. et al. WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development. Cell 121, 859–872 (2005) (10.1016/j.cell.2005.03.036) / Cell by J Wysocka (2005)
  17. Dannenberg, J. H. et al. mSin3A corepressor regulates diverse transcriptional networks governing normal and neoplastic growth and survival. Genes Dev. 19, 1581–1595 (2005) (10.1101/gad.1286905) / Genes Dev. by JH Dannenberg (2005)
  18. Ho, J. S., Ma, W., Mao, D. Y. & Benchimol, S. p53-dependent transcriptional repression of c-myc is required for G1 cell cycle arrest. Mol. Cell. Biol. 25, 7423–7431 (2005) (10.1128/MCB.25.17.7423-7431.2005) / Mol. Cell. Biol. by JS Ho (2005)
  19. Santos-Rosa, H. et al. Methylation of histone H3 K4 mediates association of the Isw1p ATPase with chromatin. Mol. Cell 12, 1325–1332 (2003) (10.1016/S1097-2765(03)00438-6) / Mol. Cell by H Santos-Rosa (2003)
  20. Pray-Grant, M. G., Daniel, J. A., Schieltz, D., Yates, J. R. III & Grant, P. A. Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation. Nature 433, 434–438 (2005) (10.1038/nature03242) / Nature by MG Pray-Grant (2005)
  21. Sims, R. J. III et al. Human but not yeast CHD1 binds directly and selectively to histone H3 methylated at lysine 4 via its tandem chromodomains. J. Biol. Chem. 280, 41789–41792 (2005) (10.1074/jbc.C500395200) / J. Biol. Chem. by RJ Sims III (2005)
  22. Wysocka, J. et al. A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling. Nature advance online publication, doi:10.1038/nature04815 (21 May 2006). (10.1038/nature04815)
  23. Mostoslavsky, R. et al. Genomic instability and aging-like phenotype in the absence of mammalian SIRT6. Cell 124, 315–329 (2006) (10.1016/j.cell.2005.11.044) / Cell by R Mostoslavsky (2006)
Dates
Type When
Created 19 years, 2 months ago (May 25, 2006, 1:39 p.m.)
Deposited 2 years, 3 months ago (May 18, 2023, 1:56 p.m.)
Indexed 2 weeks, 5 days ago (Aug. 5, 2025, 8:21 a.m.)
Issued 19 years, 3 months ago (May 21, 2006)
Published 19 years, 3 months ago (May 21, 2006)
Published Online 19 years, 3 months ago (May 21, 2006)
Published Print 19 years, 1 month ago (July 1, 2006)
Funders 0

None

@article{Shi_2006, title={ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression}, volume={442}, ISSN={1476-4687}, url={http://dx.doi.org/10.1038/nature04835}, DOI={10.1038/nature04835}, number={7098}, journal={Nature}, publisher={Springer Science and Business Media LLC}, author={Shi, Xiaobing and Hong, Tao and Walter, Kay L. and Ewalt, Mark and Michishita, Eriko and Hung, Tiffany and Carney, Dylan and Peña, Pedro and Lan, Fei and Kaadige, Mohan R. and Lacoste, Nicolas and Cayrou, Christelle and Davrazou, Foteini and Saha, Anjanabha and Cairns, Bradley R. and Ayer, Donald E. and Kutateladze, Tatiana G. and Shi, Yang and Côté, Jacques and Chua, Katrin F. and Gozani, Or}, year={2006}, month=may, pages={96–99} }