DOI: 10.1038/nature03395. Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB

Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB

10.1038/nature03395

Crossref journal-article

Springer Science and Business Media LLC

Nature (297)

Bibliography

Koster, D. A., Croquette, V., Dekker, C., Shuman, S., & Dekker, N. H. (2005). Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB. Nature, 434(7033), 671â674.

Authors 5

Daniel A. Koster (first)
Vincent Croquette (additional)
Cees Dekker (additional)
Stewart Shuman (additional)
Nynke H. Dekker (additional)

References 29 Referenced 275

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Corbett, K. D. & Berger, J. M. Structure, molecular mechanisms, and evolutionary relationships in DNA topoisomerases. Annu. Rev. Biophys. Biomol. Struct. 33, 95–118 (2004) (10.1146/annurev.biophys.33.110502.140357) / Annu. Rev. Biophys. Biomol. Struct. by KD Corbett (2004)
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Pommier, Y., Pourquier, P., Fan, Y. & Strumberg, D. Mechanism of action of eukaryotic DNA topoisomerase I and drugs targeted to the enzyme. Biochim. Biophys. Acta 1400, 83–105 (1998) (10.1016/S0167-4781(98)00129-8) / Biochim. Biophys. Acta by Y Pommier (1998)
Sekiguchi, J. & Shuman, S. Vaccinia topoisomerase binds circumferentially to DNA. J. Biol. Chem. 269, 31731–31734 (1994) (10.1016/S0021-9258(18)31757-5) / J. Biol. Chem. by J Sekiguchi (1994)
Redinbo, M. R., Stewart, L., Kuhn, P., Champoux, J. J. & Hol, W. G. Crystal structures of human topoisomerase I in covalent and noncovalent complexes with DNA. Science 279, 1504–1513 (1998) (10.1126/science.279.5356.1504) / Science by MR Redinbo (1998)
Cheng, C., Kussie, P., Pavletich, N. & Shuman, S. Conservation of structure and mechanism between eukaryotic topoisomerase I and site-specific recombinases. Cell 92, 841–850 (1998) (10.1016/S0092-8674(00)81411-7) / Cell by C Cheng (1998)
Kim, R. A. & Wang, J. C. Function of DNA topoisomerases as replication swivels in Saccharomyces cerevisiae . J. Mol. Biol. 208, 257–267 (1989) (10.1016/0022-2836(89)90387-2) / J. Mol. Biol. by RA Kim (1989)
Stewart, L., Redinbo, M. R., Qiu, X., Hol, W. G. & Champoux, J. J. A model for the mechanism of human topoisomerase I. Science 279, 1534–1541 (1998) (10.1126/science.279.5356.1534) / Science by L Stewart (1998)
Stivers, J. T., Harris, T. K. & Mildvan, A. S. Vaccinia DNA topoisomerase I: evidence supporting a free rotation mechanism for DNA supercoil relaxation. Biochemistry 36, 5212–5222 (1997) (10.1021/bi962880t) / Biochemistry by JT Stivers (1997)
Brown, P. O. & Cozzarelli, N. R. A sign inversion mechanism for enzymatic supercoiling of DNA. Science 206, 1081–1083 (1979) (10.1126/science.227059) / Science by PO Brown (1979)
Brown, P. O. & Cozzarelli, N. R. Catenation and knotting of duplex DNA by type 1 topoisomerases: a mechanistic parallel with type 2 topoisomerases. Proc. Natl Acad. Sci. USA 78, 843–847 (1981) (10.1073/pnas.78.2.843) / Proc. Natl Acad. Sci. USA by PO Brown (1981)
Brown, P. O., Peebles, C. L. & Cozzarelli, N. R. A topoisomerase from Escherichia coli related to DNA gyrase. Proc. Natl Acad. Sci. USA 76, 6110–6114 (1979) (10.1073/pnas.76.12.6110) / Proc. Natl Acad. Sci. USA by PO Brown (1979)
Liu, L. F., Liu, C. C. & Alberts, B. M. Type II DNA topoisomerases: enzymes that can unknot a topologically knotted DNA molecule via a reversible double-strand break. Cell 19, 697–707 (1980) (10.1016/S0092-8674(80)80046-8) / Cell by LF Liu (1980)
Mizuuchi, K., Fisher, L. M., O'Dea, M. H. & Gellert, M. DNA gyrase action involves the introduction of transient double-strand breaks into DNA. Proc. Natl Acad. Sci. USA 77, 1847–1851 (1980) (10.1073/pnas.77.4.1847) / Proc. Natl Acad. Sci. USA by K Mizuuchi (1980)
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Strick, T. R., Allemand, J. F., Bensimon, D., Bensimon, A. & Croquette, V. The elasticity of a single supercoiled DNA molecule. Science 271, 1835–1837 (1996) (10.1126/science.271.5257.1835) / Science by TR Strick (1996)
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Carey, J. F., Schultz, S. J., Sisson, L., Fazzio, T. G. & Champoux, J. J. DNA relaxation by human topoisomerase I occurs in the closed clamp conformation of the protein. Proc. Natl Acad. Sci. USA 100, 5640–5645 (2003) (10.1073/pnas.1031537100) / Proc. Natl Acad. Sci. USA by JF Carey (2003)
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Dates

Type	When
Created	20 years, 5 months ago (March 30, 2005, 12:37 p.m.)
Deposited	2 years, 3 months ago (May 18, 2023, 2:31 p.m.)
Indexed	4 weeks ago (Aug. 6, 2025, 9:03 a.m.)
Issued	20 years, 6 months ago (March 1, 2005)
Published	20 years, 6 months ago (March 1, 2005)
Published Print	20 years, 6 months ago (March 1, 2005)

Funders 0

None

BibTeX

@article{Koster_2005, title={Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB}, volume={434}, ISSN={1476-4687}, url={http://dx.doi.org/10.1038/nature03395}, DOI={10.1038/nature03395}, number={7033}, journal={Nature}, publisher={Springer Science and Business Media LLC}, author={Koster, Daniel A. and Croquette, Vincent and Dekker, Cees and Shuman, Stewart and Dekker, Nynke H.}, year={2005}, month=mar, pages={671–674} }

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