DOI: 10.1038/86783. Enrichment analysis of phosphorylated proteins as a tool for probing the phosphoproteome

Enrichment analysis of phosphorylated proteins as a tool for probing the phosphoproteome

10.1038/86783

Crossref journal-article

Springer Science and Business Media LLC

Nature Biotechnology (297)

Bibliography

Oda, Y., Nagasu, T., & Chait, B. T. (2001). Enrichment analysis of phosphorylated proteins as a tool for probing the phosphoproteome. Nature Biotechnology, 19(4), 379â382.

Authors 3

Yoshiya Oda (first)
Takeshi Nagasu (additional)
Brian T. Chait (additional)

References 19 Referenced 672

Lander, E.S. The new genomics: global views of biology. Science 274, 536–539 (1996). (10.1126/science.274.5287.536) / Science by ES Lander (1996)
Gygi, S.P., Corthals, G.L., Zhang, Y., Rochon, Y. & Aebersold, R. Evaluation of two-dimensional gel electrophoresis-based proteome analysis technology. Proc. Natl. Acad. Sci. USA 97, 9390–9395 (2000). (10.1073/pnas.160270797) / Proc. Natl. Acad. Sci. USA by SP Gygi (2000)
Corthals, G.L., Wasinger, V.C., Hochstrasser, D.F. & Sanchez, J.C. The dynamic range of protein expression: a challenge for proteomic research. Electrophoresis 21, 1104–1115 (2000). (10.1002/(SICI)1522-2683(20000401)21:6<1104::AID-ELPS1104>3.0.CO;2-C) / Electrophoresis by GL Corthals (2000)
Pandey, A. et al. Analysis of receptor signaling pathways by mass spectrometry: identification of vav-2 as a substrate of the epidermal and platelet-derived growth factor receptors. Proc. Natl. Acad. Sci. USA 97, 179–184 (2000). (10.1073/pnas.97.1.179) / Proc. Natl. Acad. Sci. USA by A Pandey (2000)
Taborsky, G. Phosphoproteins. Adv. Protein. Chem. 28, 1–210 (1974). (10.1016/S0065-3233(08)60230-2) / Adv. Protein. Chem. by G Taborsky (1974)
Annan, W.D., Manson, W. & Nimmo, J.A. The identification of phosphoseryl residues during the determination amino acid sequence in phosphoproteins. Anal. Biochem. 121, 62–68 (1982). (10.1016/0003-2697(82)90557-7) / Anal. Biochem. by WD Annan (1982)
Meyer, H.E., Hoffmann-Posorske, E., Korte, H. & Heilmeyer, L.M., Jr. Sequence analysis of phosphoserine-containing peptides. Modification for picomolar sensitivity. FEBS Lett. 204, 61–66 (1986). (10.1016/0014-5793(86)81388-6) / FEBS Lett. by HE Meyer (1986)
Holmes, C.F. A new method for the selective isolation of phosphoserine-containing peptides. FEBS Lett. 215, 21–24 (1987). (10.1016/0014-5793(87)80106-0) / FEBS Lett. by CF Holmes (1987)
Mega, T., Nakamura, N. & Ikenaka, T. Modifications of substituted seryl and threonyl residues in phosphopeptides and a polysialoglycoprotein by beta-elimination and nucleophile additions. J. Biochem. (Tokyo) 107, 68–72 (1990). (10.1093/oxfordjournals.jbchem.a123013) / J. Biochem. (Tokyo) by T Mega (1990)
Meyer, H.E., Hoffmann-Posorske, E. & Heilmeyer, L.M., Jr. Determination and location of phosphoserine in proteins and peptides by conversion to S-ethylcysteine. Methods Enzymol. 201, 169–185 (1991). (10.1016/0076-6879(91)01016-U) / Methods Enzymol. by HE Meyer (1991)
Meyer, H.E. et al. Strategies for nonradioactive methods in the localization of phosphorylated amino acids in proteins. FASEB J. 7, 776–782 (1993). (10.1096/fasebj.7.9.7687226) / FASEB J. by HE Meyer (1993)
Moorhead, G., MacKintosh, R.W., Morrice, N., Gallagher, T. & MacKintosh, C. Purification of type 1 protein (serine/threonine) phosphatases by microcystin–Sepharose affinity chromatography. FEBS Lett. 356, 46–50 (1994). (10.1016/0014-5793(94)01232-6) / FEBS Lett. by G Moorhead (1994)
Fadden, P. & Haystead, T.A. Quantitative and selective fluorophore labeling of phosphoserine on peptides and proteins: characterization at the attomole level by capillary electrophoresis and laser-induced fluorescence. Anal. Biochem. 225, 81–88 (1995). (10.1006/abio.1995.1111) / Anal. Biochem. by P Fadden (1995)
Jaffe, H., Veeranna & Pant, H.C. Characterization of serine and threonine phosphorylation sites in beta-elimination/ethanethiol addition-modified proteins by electrospray tandem mass spectrometry and database searching. Biochemistry 37, 16211–16224 (1998). (10.1021/bi981264p) / Biochemistry by H Jaffe (1998)
Patchornik, A. & Sokolovsky, M. Nonenzymatic cleavages of peptide chains at the cysteine and serine residues through their conversion into dehydroalanine. I. Hydrolytic and oxidative cleavage of dehydroalanine residues. J. Am. Chem. Soc. 86, 1206–1212 (1964). (10.1021/ja01060a049) / J. Am. Chem. Soc. by A Patchornik (1964)
Zhang, W. & Chait, B.T. ProFound: an expert system for protein identification using mass spectrometric peptide mapping information. Anal. Chem. 72, 2482–2489 (2000). (10.1021/ac991363o) / Anal. Chem. by W Zhang (2000)
Fenyo, D., Qin, J. & Chait, B.T. Protein identification using mass spectrometric information. Electrophoresis 19, 998–1005 (1998). (10.1002/elps.1150190615) / Electrophoresis by D Fenyo (1998)
Sechi, S. & Chait, B.T. Modification of cysteine residues by alkylation. A tool in peptide mapping and protein identification. Anal. Chem. 70, 5150–5158 (1998). (10.1021/ac9806005) / Anal. Chem. by S Sechi (1998)
Biemann, K. Contributions of mass spectrometry to peptide and protein structure. Biomed. Environ. Mass Spectrom. 16, 99–111 (1988). (10.1002/bms.1200160119) / Biomed. Environ. Mass Spectrom. by K Biemann (1988)

Dates

Type	When
Created	23 years ago (July 26, 2002, 4:41 a.m.)
Deposited	2 years, 3 months ago (May 18, 2023, 3:39 p.m.)
Indexed	2 weeks, 2 days ago (Aug. 5, 2025, 9:05 a.m.)
Issued	24 years, 4 months ago (April 1, 2001)
Published	24 years, 4 months ago (April 1, 2001)
Published Print	24 years, 4 months ago (April 1, 2001)

Funders 0

None

BibTeX

@article{Oda_2001, title={Enrichment analysis of phosphorylated proteins as a tool for probing the phosphoproteome}, volume={19}, ISSN={1546-1696}, url={http://dx.doi.org/10.1038/86783}, DOI={10.1038/86783}, number={4}, journal={Nature Biotechnology}, publisher={Springer Science and Business Media LLC}, author={Oda, Yoshiya and Nagasu, Takeshi and Chait, Brian T.}, year={2001}, month=apr, pages={379–382} }

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