10.1023/a:1008766422140
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Perspectives in Drug Discovery and Design (297)
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Eisenhaber, F. (1999). Hydrophobic regions on protein surfaces. Perspectives in Drug Discovery and Design, 17(1), 27–42.

Authors 1
  1. Frank Eisenhaber (first)
References 105 Referenced 11
  1. Eisenhaber, F., Persson, B. and Argos, P., Crit. Rev. Biochem. Mol. Biol., 30 (1995) 1. (10.3109/10409239509085139) / Crit. Rev. Biochem. Mol. Biol. by F. Eisenhaber (1995)
  2. Strynadka, N.C.J., Eisenstein, M., Katchalski-Katzir, E., Shoichet, B.K., Kuntz, I.D., Abagyan, R., Totrov, M., Janin, J., Cherfils, J., Zimmermann, F., Olson, A., Duncan, B., Rao, M., Jackson, R., Sternberg, M. and James, M.N.G., Nat. Struct. Biol., 3 (1996) 233. (10.1038/nsb0396-233) / Nat. Struct. Biol. by N.C.J. Strynadka (1996)
  3. Rupley, J.A. and Careri, G., Adv. Protein Chem., 41 (1991) 37. (10.1016/S0065-3233(08)60197-7) / Adv. Protein Chem. by J.A. Rupley (1991)
  4. Eisenhaber, F. and Argos, P., Protein Eng., 9 (1996) 1121. (10.1093/protein/9.12.1121) / Protein Eng. by F. Eisenhaber (1996)
  5. Wüthrich, K., Otting, G. and Liepinsh, E., Faraday Discuss., 93 (1992) 35. (10.1039/FD9929300035) / Faraday Discuss. by K. Wüthrich (1992)
  6. Levitt, M. and Park, B.H., Structure, 1 (1993) 223. (10.1016/0969-2126(93)90011-5) / Structure by M. Levitt (1993)
  7. Steinhoff, H.-J., Kramm, B., Hess, G., Owerdieck, C. and Redhardt, A., Biophys. J., 65 (1993) 1486. (10.1016/S0006-3495(93)81217-7) / Biophys. J. by H.-J. Steinhoff (1993)
  8. Phillips Jr., G.N. and Pettitt, B.M., Protein Sci., 4 (1995) 149. (10.1002/pro.5560040202) / Protein Sci. by G.N. Phillips Jr. (1995)
  9. Otting, G. and Liepinsh, E., Acc. Chem. Res., 28 (1995) 171. (10.1021/ar00052a002) / Acc. Chem. Res. by G. Otting (1995)
  10. Peemoeller, H., Yeomans, F.G., Kydon, D.W. and Sharp, A.R., Biophys. J., 49 (1986) 943. (10.1016/S0006-3495(86)83722-5) / Biophys. J. by H. Peemoeller (1986)
  11. Eisenmenger, F., Eisenhaber, F., Tumanyan, V.G. and Esipova, N.G., Studia Biophys., 98 (1984) 155. / Studia Biophys. by F. Eisenmenger (1984)
  12. Bryant, S.H., Proteins, 26 (1996) 172. (10.1002/(SICI)1097-0134(199610)26:2<172::AID-PROT7>3.0.CO;2-I) / Proteins by S.H. Bryant (1996)
  13. Herrmann, R.B., J. Phys. Chem., 76 (1972) 2754. (10.1021/j100663a023) / J. Phys. Chem. by R.B. Herrmann (1972)
  14. Reynolds, J.A., Gilbert, D.B. and Tanford, C., Proc. Natl. Acad. Sci. USA, 71 (1974) 2925. (10.1073/pnas.71.8.2925) / Proc. Natl. Acad. Sci. USA by J.A. Reynolds (1974)
  15. Amidon, G.L., Yalkowsky, S.H., Anik, S.T. and Valvani, S.C., J. Phys. Chem., 79 (1975) 2239. (10.1021/j100588a008) / J. Phys. Chem. by G.L. Amidon (1975)
  16. Valvani, S.C., Yalkowsky, S.H. and Amidon, G.L., J. Phys. Chem., 80 (1976) 829. (10.1021/j100549a012) / J. Phys. Chem. by S.C. Valvani (1976)
  17. Herrmann, R.B., Proc. Natl. Acad. Sci. USA, 74 (1977) 4144. (10.1073/pnas.74.10.4144) / Proc. Natl. Acad. Sci. USA by R.B. Herrmann (1977)
  18. Hopfinger, A.J., Macromolecules, 4 (1971) 731. (10.1021/ma60024a012) / Macromolecules by A.J. Hopfinger (1971)
  19. Hodes, Z.I., Nemethy, G. and Scheraga, H.A., Biopolymers, 18 (1979) 1565. (10.1002/bip.1979.360180702) / Biopolymers by Z.I. Hodes (1979)
  20. Hodes, Z.I., Nemethy, G. and Scheraga, H.A., Biopolymers, 18 (1979) 1611. (10.1002/bip.1979.360180703) / Biopolymers by Z.I. Hodes (1979)
  21. Kang, Y.K., Gibson, K.D., Nemethy, G. and Scheraga, H.A., J. Phys. Chem., 92 (1988) 4742. (10.1021/j100327a037) / J. Phys. Chem. by Y.K. Kang (1988)
  22. Colonna-Cesari, F. and Sander, C., Biophys. J., 57 (1990) 1103. (10.1016/S0006-3495(90)82630-8) / Biophys. J. by F. Colonna-Cesari (1990)
  23. Stouten, P.F.W., Frömmel, C., Nakamura, H. and Sander, C., Mol. Simul., 10 (1993) 97. (10.1080/08927029308022161) / Mol. Simul. by P.F.W. Stouten (1993)
  24. Luty, B.A., Wasserman, Z.R., Stouton, P.F.W., Hodge, C.N., Zacharias, M. and McCammon, J.A., J. Comput. Chem., 16 (1995) 454. (10.1002/jcc.540160409) / J. Comput. Chem. by B.A. Luty (1995)
  25. Augspurger, J.D. and Scheraga, H.A., J. Comput. Chem., 17 (1996) 1549. (10.1002/(SICI)1096-987X(199610)17:13<1549::AID-JCC6>3.0.CO;2-S) / J. Comput. Chem. by J.D. Augspurger (1996)
  26. Richards, F.M., Annu. Rev. Biophys. Bioeng., 6 (1995) 151. (10.1146/annurev.bb.06.060177.001055) / Annu. Rev. Biophys. Bioeng. by F.M. Richards (1995)
  27. Pauling, L., The Nature of the Chemical Bond, Cornell University, Ithaca, NY, 1960. / The Nature of the Chemical Bond by L. Pauling (1960)
  28. Bondi, A., Physical Properties of Molecular Crystals, Liquids and Glasses,Wiley, New York, NY, 1968. / Physical Properties of Molecular Crystals, Liquids and Glasses by A. Bondi (1968)
  29. Chothia, C., Nature, 254 (1975) 304. (10.1038/254304a0) / Nature by C. Chothia (1975)
  30. Li, A. and Nussinov, R., Proteins, 18 (1998) 111. (10.1002/(SICI)1097-0134(19980701)32:1<111::AID-PROT12>3.0.CO;2-H) / Proteins by A. Li (1998)
  31. Nyburg, S.C., Faerman, C.H. and Prasad, L., Acta Crystallogr., B43 (1987) 106. (10.1107/S0108768187098227) / Acta Crystallogr. by S.C. Nyburg (1987)
  32. Ikuta, S., Ishikawa, M., Katada, M. and Sano, H., Acta Crystallogr., B46 (1991) 23. / Acta Crystallogr. by S. Ikuta (1991)
  33. Steiner, T. and Saenger, W., Acta Crystallogr., B47 (1991) 1022. (10.1107/S0108768191005931) / Acta Crystallogr. by T. Steiner (1991)
  34. Stone, A.J. and Tong, C.-S., J. Comput. Chem., 15 (1994) 1377. (10.1002/jcc.540151208) / J. Comput. Chem. by A.J. Stone (1994)
  35. Frömmel, C., J. Theor. Biol., 111 (1984) 247. (10.1016/S0022-5193(84)80209-X) / Theor. Biol. by C. J. Frömmel (1984)
  36. Eisenberg, D. and McLachlan, A.D., Nature, 319 (1986) 199. (10.1038/319199a0) / Nature by D. Eisenberg (1986)
  37. Murphy, L.R., Matubayasi, N., Payne, V.A. and Levy, R.M., Folding Design, 3 (1998) 105. (10.1016/S1359-0278(98)00016-9) / Folding Design by L.R. Murphy (1998)
  38. Eisenhaber, F., Lijnzaad, P., Argos, P., Sander, C. and Scharf, M., J. Comput. Chem., 16 (1995) 273. (10.1002/jcc.540160303) / J. Comput. Chem. by F. Eisenhaber (1995)
  39. Bliznyuk, A.A. and Gready, J.E., J. Comput. Chem., 17 (1996) 962. (10.1002/(SICI)1096-987X(199606)17:8<962::AID-JCC5>3.0.CO;2-P) / J. Comput. Chem. by A.A. Bliznyuk (1996)
  40. Bliznyuk, A.A. and Gready, J.E., J. Comput. Chem., 17 (1996) 970. (10.1002/(SICI)1096-987X(199606)17:8<970::AID-JCC6>3.0.CO;2-O) / Comput. Chem. by A.A. Bliznyuk (1996)
  41. Richmond, T.J., J. Mol. Biol., 178 (1984) 63. (10.1016/0022-2836(84)90231-6) / J. Mol. Biol. by T.J. Richmond (1984)
  42. Kundrot, C.E., Ponder, J.W. and Richards, F.M., J. Comput. Chem., 12 (1991) 402. (10.1002/jcc.540120314) / J. Comput. Chem. by C.E. Kundrot (1991)
  43. Perrot, G., Cheng, B., Gibson, K.D., Vila, J., Palmer, K.A., Nayeem, A., Maigret, B. and Scheraga, H.A., J. Comput. Chem., 13 (1992) 1. (10.1002/jcc.540130102) / J. Comput. Chem. by G. Perrot (1992)
  44. Cossi, M., Mennucci, B. and Cammi, R., J. Comput. Chem., 17 (1996) 57. (10.1002/(SICI)1096-987X(19960115)17:1<57::AID-JCC6>3.0.CO;2-#) / J. Comput. Chem. by M. Cossi (1996)
  45. Von Freyberg, B. and Braun, W., J. Comput. Chem., 14 (1993) 510. (10.1002/jcc.540140503) / J. Comput. Chem. by B. Von Freyberg (1993)
  46. Von Freyberg, B., Richmond, T.J. and Braun, W., J. Mol. Biol., 233 (1993) 275. (10.1006/jmbi.1993.1506) / J. Mol. Biol. by B. Von Freyberg (1993)
  47. Mumenthaler, C. and Braun, W., J. Mol. Modelling, 1 (1995) 1. (10.1007/s008940050001) / Mol. Modelling by C. Mumenthaler (1995)
  48. Schiffer, C.A., Caldwell, J.W., Kollman, P.A. and Stroud, R.M., Mol. Simul., 10 (1993) 121. (10.1080/08927029308022162) / Mol. Simul. by C.A. Schiffer (1993)
  49. Zhang, H., Wong, C.F., Thacher, T. and Rabitz, H., Proteins, 23 (1995) 218. (10.1002/prot.340230211) / Proteins by H. Zhang (1995)
  50. Juffer, A., Eisenhaber, F., Hubbard, S.J., Walther, D. and Argos, P., Protein Sci., 4 (1995) 2499. (10.1002/pro.5560041206) / Protein Sci. by A. Juffer (1995)
  51. Juffer, A.H., Eisenhaber, F., Hubbard, S.J., Walther, D. and Argos, P., Protein Sci., 5 (1996) 1748. (10.1002/pro.5560050828) / Protein Sci. by A.H. Juffer (1996)
  52. Cummings, M.D., Hart, T.N. and Read, R.J., Protein Sci., 4 (1995) 2087. (10.1002/pro.5560041014) / Protein Sci. by M.D. Cummings (1995)
  53. Karplus, P.A., Protein Sci., 6 (1997) 1307. / Protein Sci. by P.A. Karplus (1997)
  54. Vajda, S., Weng, Z. and DeLisi, C., Protein Eng., 8 (1995) 1081. (10.1093/protein/8.11.1081) / Protein Eng. by S. Vajda (1995)
  55. Audry, E., Dubost, J.P., Colleter, J.C. and Dallet, Ph., Eur. J. Med. Chem.-Chim. Ther., 21 (1986) 71. / Eur. J. Med. Chem.-Chim. Ther. by E. Audry (1986)
  56. Furet, P., Sele, A. and Cohen, N.C., J. Mol. Graph., 6 (1988) 182. (10.1016/S0263-7855(98)80001-5) / J. Mol. Graph. by P. Furet (1988)
  57. Fauchère, J.-L., Quarendon, P. and Kaetterer, L., J. Mol. Graph., 6 (1988) 203. (10.1016/S0263-7855(98)80004-0) / J. Mol. Graph. by J.-L. Fauchère (1988)
  58. Croizet, F., Langlois, M.H., Dubost, J.P., Braquet, P., Audry, E., Dallet, Ph. and Colleter, J.C., J. Mol. Graph., 8 (1990) 153. (10.1016/0263-7855(90)80056-L) / J. Mol. Graph. by F. Croizet (1990)
  59. Brasseur, R., J. Biol. Chem., 266 (1991) 16120. (10.1016/S0021-9258(18)98524-8) / J. Biol. Chem. by R. Brasseur (1991)
  60. Heiden, W., Moeckel, G. and Brickmann, J., J. Comput.-Aided Mol. Design, 7 (1993) 503. (10.1007/BF00124359) / Comput.-Aided Mol. Design by W. Heiden (1993)
  61. Young, L., Jernigan, R.L. and Covell, D.G., Protein Sci., 3 (1994) 717. (10.1002/pro.5560030501) / Protein Sci. by L. Young (1994)
  62. Du, Q. and Arteca, G.A., J. Comput.-Aided Mol. Design, 10 (1996) 133. (10.1007/BF00402821) / J. Comput.-Aided Mol. Design by Q. Du (1996)
  63. Du, Q., Arteca, G.A. and Mezey, P.G., J. Comput.-Aided Mol. Design, 11 (1997) 503. (10.1023/A:1007949918800) / J. Comput.-Aided Mol. Design by Q. Du (1997)
  64. Vedani, A. and Huhta, D., J. Am. Chem. Soc., 113 (1991) 5860. (10.1021/ja00015a049) / J. Am. Chem. Soc. by A. Vedani (1991)
  65. Pitt, W.R., Murray-Rust, J. and Goodfellow, J.M., J. Comput. Chem., 14 (1993) 1007. (10.1002/jcc.540140902) / Comput. Chem. by W.R. Pitt (1993)
  66. Zheng, Ch., Wong, Ch.F. and McCammon, J.A., Biopolymers, 29 (1990) 1877. (10.1002/bip.360291418) / Biopolymers by C. Zheng (1990)
  67. Eisenhaber, F., Mannik, J.H. and Tumanyan, V.G., Biopolymers, 29 (1990) 1453. (10.1002/bip.360291012) / Biopolymers by F. Eisenhaber (1990)
  68. Eisenhaber, F., Tumanyan, V.G. and Abagyan, R.A., Biopolymers, 30 (1990) 563. (10.1002/bip.360300509) / Biopolymers by F. Eisenhaber (1990)
  69. Eisenhaber, F. and Schulz, W., Biopolymers, 32 (1992) 1643. (10.1002/bip.360321207) / Biopolymers by F. Eisenhaber (1992)
  70. Brunne, R.M., Liepinsh, E., Otting, G., Wüthrich, K. and van Gunsteren, W.F., J. Mol. Biol., 231 (1993) 1040. (10.1006/jmbi.1993.1350) / J. Mol. Biol. by R.M. Brunne (1993)
  71. Lounnas, V. and Pettitt, B.M., Proteins, 18 (1994) 133. (10.1002/prot.340180206) / Proteins by V. Lounnas (1994)
  72. Lounnas, V. and Pettitt, B.M., Proteins, 18 (1994) 148. (10.1002/prot.340180207) / Proteins by V. Lounnas (1994)
  73. Lounnas, V., Pettitt, B.M. and Phillips Jr., G.N., Biophys. J., 66 (1994) 601. (10.1016/S0006-3495(94)80835-5) / Biophys. J. by V. Lounnas (1994)
  74. Rao, S.T., Wu, S., Satyshur, K.A., Ling, K.-Y., Kung, C. and Sundaralingam, M., Protein Sci., 2 (1993) 436. (10.1002/pro.5560020316) / Protein Sci. by S.T. Rao (1993)
  75. Vogel, H.J., Biochem. Cell Biol., 72 (1994) 357. (10.1139/o94-049) / Biochem. Cell Biol. by H.J. Vogel (1994)
  76. Wintrode, P.L. and Privalov, P.L., J. Mol. Biol., 266 (1997) 1050. (10.1006/jmbi.1996.0785) / J. Mol. Biol. by P.L. Wintrode (1997)
  77. Prange, T., Schiltz, M., Pernot, L., Colloc'h, N., Longhi, S., Bourguet, W. and Fourme, R., Proteins, 30 (1998) 61. (10.1002/(SICI)1097-0134(19980101)30:1<61::AID-PROT6>3.0.CO;2-N) / Proteins by T. Prange (1998)
  78. Rees, D.C. and Wolfe, G.M., Protein Sci., 2 (1993) 1882. (10.1002/pro.5560021110) / Protein Sci. by D.C. Rees (1993)
  79. Eisenhaber, F., Protein Sci., 5 (1996) 1676. (10.1002/pro.5560050821) / Protein Sci. by F. Eisenhaber (1996)
  80. Ooi, T., Oobatake, M., Nemethy, G. and Scheraga, H.A., Proc. Natl. Acad. Sci. USA, 84 (1987) 3086. (10.1073/pnas.84.10.3086) / Proc. Natl. Acad. Sci. USA by T. Ooi (1987)
  81. Eisenberg, D., Wesson, M. and Yamashita, M., Chem. Scripta, 29A (1989) 217. / Chem. Scripta by D. Eisenberg (1989)
  82. Wesson, L. and Eisenberg, D., Protein Sci., 1 (1992) 227. (10.1002/pro.5560010204) / Protein Sci. by L. Wesson (1992)
  83. Koehl, P. and Delarue, M., Proteins, 20 (1994) 264. (10.1002/prot.340200307) / Proteins by P. Koehl (1994)
  84. Eriksson, A.E., Baase, W.A., Zhang, X.-J., Heinz, D.W., Blaber, M., Baldwin, E.P. and Matthews, B.W., Science, 255 (1992) 178. (10.1126/science.1553543) / Science by A.E. Eriksson (1992)
  85. Eriksson, A.E., Baase, W.A. and Matthews, B.W., J. Mol. Biol., 229 (1993) 747. (10.1006/jmbi.1993.1077) / J. Mol. Biol. by A.E. Eriksson (1993)
  86. Pinker, R.J., Rose, G.D. and Kallenbach, N.R., Protein Sci., 2 (1993) 1099. (10.1002/pro.5560020704) / Protein Sci. by R.J. Pinker (1993)
  87. Vallone, B., Miele, A.E., Vecchini, P., Chiancone, E. and Brunori, M., Proc. Natl. Acad. Sci. USA, 95 (1998) 6103. (10.1073/pnas.95.11.6103) / Proc. Natl. Acad. Sci. USA by B. Vallone (1998)
  88. Wang, Y., Zhang, H. and Scott, R.A., Protein Sci., 4 (1995) 1402. (10.1002/pro.5560040714) / Protein Sci. by Y. Wang (1995)
  89. Lemieux, R.U., Acc. Chem. Res., 29 (1996) 373. (10.1021/ar9600087) / Acc. Chem. Res. by R.U. Lemieux (1996)
  90. Argos, P., Protein Eng., 2 (1988) 101. (10.1093/protein/2.2.101) / Protein Eng. by P. Argos (1988)
  91. Janin, J., Miller, S. and Chothia, C., J. Mol. Biol., 204 (1988) 155. (10.1016/0022-2836(88)90606-7) / J. Mol. Biol. by J. Janin (1988)
  92. Miller, S., Protein Eng., 3 (1989) 77. (10.1093/protein/3.2.77) / Protein Eng. by S. Miller (1989)
  93. Janin, J. and Chothia, C., J. Biol. Chem., 265 (1990) 1627. (10.1016/S0021-9258(17)46181-3) / J. Biol. Chem. by J. Janin (1990)
  94. Korn, A.P. and Burnett, R.M., Proteins, 9 (1991) 37. (10.1002/prot.340090106) / Proteins by A.P. Korn (1991)
  95. Jones, S. and Thornton, J.M., Proc. Natl. Acad. Sci. USA, 93 (1996) 13. (10.1073/pnas.93.1.13) / Proc. Natl. Acad. Sci. USA by S. Jones (1996)
  96. Tsai, C.-J., Lin, S.L., Wolfson, H.J. and Nussinov, R., Crit. Rev. Biochem. Mol. Biol., 31 (1996) 127. (10.3109/10409239609106582) / Crit. Rev. Biochem. Mol. Biol. by C.-J. Tsai (1996)
  97. Jones, S. and Thornton, J.M., J. Mol. Biol., 272 (1997) 121. (10.1006/jmbi.1997.1234) / J. Mol. Biol. by S. Jones (1997)
  98. Jones, S. and Thornton, J.M., J. Mol. Biol., 272 (1997) 133. (10.1006/jmbi.1997.1233) / J. Mol. Biol. by S. Jones (1997)
  99. Tsai, C.-J., Lin, S.L., Wolfson, H.J. and Nussinov, R., Protein Sci., 6 (1997) 53. (10.1002/pro.5560060106) / Protein Sci. by C.-J. Tsai (1997)
  100. Conte, L.L., Chothia, C. and Janin, J., J. Mol. Biol., 285 (1999) 2177. (10.1006/jmbi.1998.2439) / J. Mol. Biol. by L.L. Conte (1999)
  101. Lijnzaad, P. and Argos, P., Proteins, 28 (1997) 333. (10.1002/(SICI)1097-0134(199707)28:3<333::AID-PROT4>3.0.CO;2-D) / Proteins by P. Lijnzaad (1997)
  102. Tisi, L.C. and Evans, P.A., J. Mol. Biol., 249 (1995) 251. (10.1006/jmbi.1995.0294) / J. Mol. Biol. by L.C. Tisi (1995)
  103. Uversky, V.N. and Ptitsyn, O.B., J. Mol. Biol., 255 (1996) 215. (10.1006/jmbi.1996.0018) / J. Mol. Biol. by V.N. Uversky (1996)
  104. Causette, M., Planche, H., Delepine, S., Monsan, P., Gaunand, A. and Lindet, B., Protein Eng., 10 (1997) 1235. (10.1093/protein/10.10.1235) / Protein Eng. by M. Causette (1997)
  105. Kuehner, D.E., Heyer, C., Rämsch, C., Fornefeld, U.M., Blanch, H.W. and Prausnitz, J.M., Biophys. J., 73 (1997) 3211. (10.1016/S0006-3495(97)78346-2) / J.M., Biophys. J. by D.E. Kuehner (1997)
Dates
Type When
Created 22 years, 8 months ago (Dec. 22, 2002, 6:37 a.m.)
Deposited 3 weeks ago (Aug. 1, 2025, 12:46 a.m.)
Indexed 2 weeks, 6 days ago (Aug. 1, 2025, 8:04 p.m.)
Issued 26 years, 7 months ago (Jan. 1, 1999)
Published 26 years, 7 months ago (Jan. 1, 1999)
Published Print 26 years, 7 months ago (Jan. 1, 1999)
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@article{Eisenhaber_1999, title={Hydrophobic regions on protein surfaces}, volume={17}, ISSN={1573-9023}, url={http://dx.doi.org/10.1023/a:1008766422140}, DOI={10.1023/a:1008766422140}, number={1}, journal={Perspectives in Drug Discovery and Design}, publisher={Springer Science and Business Media LLC}, author={Eisenhaber, Frank}, year={1999}, month=jan, pages={27–42} }