Crossref journal-article
American Chemical Society (ACS)
Journal of the American Chemical Society (316)
Bibliography

Fahmy, A., & Wagner, G. (2002). TreeDock:  A Tool for Protein Docking Based on Minimizing van der Waals Energies. Journal of the American Chemical Society, 124(7), 1241–1250.

Authors 2
  1. Amr Fahmy (first)
  2. Gerhard Wagner (additional)
References 42 Referenced 50
  1. {'key': 'ja011240xb00001/ja011240xb00001_1', 'first-page': '20', 'volume': '93', 'author': 'Jones S.', 'year': '1996', 'journal-title': 'Proc. Natl. Acad. Sci. U.S.A.'} / Proc. Natl. Acad. Sci. U.S.A. by Jones S. (1996)
  2. 10.1021/jm00161a004 / J. Med. Chem. by DesJarlais R. L. (1986)
  3. 10.1023/A:1008066310669 / J. Comput.-Aided Mol. Des. by Makino S. (1999)
  4. 10.1002/(SICI)1097-0134(19990101)34:1<29::AID-PROT4>3.0.CO;2-U / Proteins by Maurer M. C. (1999)
  5. 10.1007/BF00124402 / J. Comput.-Aided. Mol. Des. by Oshiro C. M. (1995)
  6. 10.1002/(SICI)1097-0134(19990701)36:1<1::AID-PROT1>3.0.CO;2-T / Proteins by Wang J. (1999)
  7. {'key': 'ja011240xb00007/ja011240xb00007_1', 'first-page': '192', 'volume': '6', 'author': 'Sternberg M. J.', 'year': '1998', 'journal-title': 'Ismb'} / Ismb by Sternberg M. J. (1998)
  8. 10.1073/pnas.97.16.9021 / Proc. Natl. Acad. Sci. U.S.A. by Clore G. M. (2000)
  9. 10.1002/prot.340110104 / Proteins by Miranker A. (1991)
  10. {'key': 'ja011240xb00010/ja011240xb00010_1', 'first-page': '214', 'author': 'Sobolev V.', 'year': '1997', 'journal-title': 'Proteins'} / Proteins by Sobolev V. (1997)
  11. 10.1016/S0959-440X(98)80047-X / Curr. Opin. Struct. Biol. by Sternberg M. J. (1998)
  12. 10.1073/pnas.89.6.2195 / Proc . Natl. Acad. Sci. U.S.A. by Katchalski-Katzir E. (1992)
  13. 10.1016/S0969-2126(00)00060-5 / Structure by Verlinde C. L. (1994)
  14. {'key': 'ja011240xb00014/ja011240xb00014_1', 'first-page': '239', 'volume': '3', 'author': 'Strynadka N. C.', 'year': '1996', 'journal-title': 'Nat. Struct. Biol.'} / Nat. Struct. Biol. by Strynadka N. C. (1996)
  15. 10.1016/0022-2836(82)90153-X / J. Mol. Biol. by Kuntz I. D. (1982)
  16. {'key': 'ja011240xb00016/ja011240xb00016_1', 'first-page': '78', 'volume': '6', 'author': 'Böhm H.', 'year': '1992', 'journal-title': 'J. Comput.-Aided Mol. Des.'} / J. Comput.-Aided Mol. Des. by Böhm H. (1992)
  17. 10.1007/BF01533070 / J. Comput.-Aided Mol. Des. by van Drie J. (1989)
  18. {'key': 'ja011240xb00018/ja011240xb00018_1', 'first-page': '322', 'volume': '7', 'author': 'Ho C.', 'year': '1993', 'journal-title': 'J. Comput.-Aided Mol. Des.'} / J. Comput.-Aided Mol. Des. by Ho C. (1993)
  19. 10.1002/(SICI)1096-987X(19981115)19:14<1639::AID-JCC10>3.0.CO;2-B / J. Comput. Chem. by Morris G. M. (1998)
  20. 10.1021/jm00145a002 / J. Med. Chem. by Goodford P. J. (1985)
  21. 10.1002/prot.340120105 / Proteins by Lawrence M. C. (1992)
  22. 10.1073/pnas.95.14.8011 / Proc. Natl. Acad. Sci. U.S.A. by Trosset J. Y. (1998)
  23. {'key': 'ja011240xb00023/ja011240xb00023_1', 'first-page': '120', 'volume': '272', 'author': 'Gabb H. A.', 'year': '1997', 'journal-title': 'J. Mol. Biol.'} / J. Mol. Biol. by Gabb H. A. (1997)
  24. {'key': 'ja011240xb00024/ja011240xb00024_1', 'first-page': '988', 'volume': '20', 'author': 'Bliznyuk A.', 'year': '1999', 'journal-title': 'J. Comput. Chem.'} / J. Comput. Chem. by Bliznyuk A. (1999)
  25. 10.1016/S0022-2836(05)80038-5 / J. Mol. Biol. by Leach A. (1994)
  26. 10.1126/science.274.5292.1531 / Science by Shuker S. B. (1996)
  27. {'key': 'ja011240xb00027/ja011240xb00027_1', 'first-page': '223', 'volume': '7', 'author': 'Takahashi H.', 'year': '2000', 'journal-title': 'Nat. Struct. Biol.'} / Nat. Struct. Biol. by Takahashi H. (2000)
  28. {'key': 'ja011240xb00028/ja011240xb00028_1', 'first-page': '4502', 'volume': '88', 'author': 'Bass S. H.', 'year': '1991', 'journal-title': 'Proc. Natl. Acad. Sci. U.S.A.'} / Proc. Natl. Acad. Sci. U.S.A. by Bass S. H. (1991)
  29. 10.1016/0076-6879(91)02021-Z / Methods Enzymol. by Wells J. A. (1991)
  30. Brünger, A. T.; Adams, P. D.; Clore, G. M.; DeLano, W. L.; Gros, P.; Grosse-Kunstleve, R. W.; Jiang, J. S.; Kuszewski, J.; Nilges, M.; Pannu, N. S.; Read, R. J.; Rice, L. M.; Simonson, T.; Warren, G. L.Acta Crystallogr.Sect. D:  Biol. Crystallogr.1998,54, 905−921. (10.1107/S0907444998003254)
  31. 10.1021/ja011239y / J. Am. Chem. Soc. by Lugovskoy A. A. (2002)
  32. 10.1145/361002.361007 / Commun. ACM by Bentley J. (1975)
  33. 10.1007/978-1-4612-1098-6 / Computational Geometry by Preparata F. (1985)
  34. 10.1107/S0108767391002295 / Acta Crystallogr. by Engh R. A. (1991)
  35. {'key': 'ja011240xb00035/ja011240xb00035_1', 'volume-title': 'Department of Biochemistry and Molecular Biology', 'author': 'Hubbard S.', 'year': '1993'} / Department of Biochemistry and Molecular Biology by Hubbard S. (1993)
  36. {'key': 'ja011240xb00036/ja011240xb00036_1', 'first-page': '400', 'volume': '55', 'author': 'Lee B.', 'year': '1971', 'journal-title': 'J. Mol. Biol.'} / J. Mol. Biol. by Lee B. (1971)
  37. {'key': 'ja011240xb00037/ja011240xb00037_1', 'first-page': '581', 'volume': '6', 'author': 'Hare B. J.', 'year': '1999', 'journal-title': 'Nat. Struct. Biol.'} / Nat. Struct. Biol. by Hare B. J. (1999)
  38. {'key': 'ja011240xb00038/ja011240xb00038_1', 'first-page': '803', 'volume': '97', 'author': 'Wang J. H.', 'year': '1999', 'journal-title': 'Cell'} / Cell by Wang J. H. (1999)
  39. {'key': 'ja011240xb00039/ja011240xb00039_1', 'first-page': '334', 'volume': '99', 'author': 'Lee J. O.', 'year': '1999', 'journal-title': 'Cell'} / Cell by Lee J. O. (1999)
  40. 10.1126/science.286.5446.1913 / Science by Reinherz E. L. (1999)
  41. 10.1038/35055085 / Nat. Cell. Biol. by Degterev A. (2001)
  42. {'key': 'ja011240xb00042/ja011240xb00042_1', 'first-page': '738', 'volume': '4', 'author': 'Tjandra N.', 'year': '1997', 'journal-title': 'Nat. Struct. Biol.'} / Nat. Struct. Biol. by Tjandra N. (1997)
Dates
Type When
Created 23 years, 1 month ago (July 26, 2002, 12:48 a.m.)
Deposited 3 years, 11 months ago (Sept. 23, 2021, 4:48 a.m.)
Indexed 2 months, 1 week ago (June 26, 2025, 9:29 a.m.)
Issued 23 years, 7 months ago (Jan. 25, 2002)
Published 23 years, 7 months ago (Jan. 25, 2002)
Published Online 23 years, 7 months ago (Jan. 25, 2002)
Published Print 23 years, 7 months ago (Feb. 1, 2002)
Funders 0

None

@article{Fahmy_2002, title={TreeDock:  A Tool for Protein Docking Based on Minimizing van der Waals Energies}, volume={124}, ISSN={1520-5126}, url={http://dx.doi.org/10.1021/ja011240x}, DOI={10.1021/ja011240x}, number={7}, journal={Journal of the American Chemical Society}, publisher={American Chemical Society (ACS)}, author={Fahmy, Amr and Wagner, Gerhard}, year={2002}, month=jan, pages={1241–1250} }