Crossref
journal-article
Elsevier BV
Structure (78)
References
36
Referenced
33
{'key': '10.1016/j.str.2005.06.008_bib1', 'series-title': 'Protein Crystallography', 'author': 'Blundell', 'year': '1976'}
/ Protein Crystallography by Blundell (1976)10.1038/326347a0
/ Nature / Knowledge-based prediction of protein structures and the design of novel molecules by Blundell (1987)10.1111/j.1432-1033.1988.tb13917.x
/ Eur. J. Biochem. / 18th Sir Hans Krebs lecture. Knowledge-based protein modelling and design by Blundell (1988)10.1038/355472a0
/ Nature / The free R value: a novel statistical quantity for assessing the accuracy of crystal structures by Brunger (1992)10.1126/science.235.4787.458
/ Science / Crystallographic R factor refinement by molecular dynamics by Brunger (1987)10.1107/S0907444998003254
/ Acta Crystallogr. D Biol. Crystallogr. / Crystallography & NMR system: a new software suite for macromolecular structure determination by Brunger (1998){'key': '10.1016/j.str.2005.06.008_bib7', 'series-title': 'Ab initio Sampling of Polypeptide Conformations and the Prediction of Protein Structure', 'author': 'de Bakker', 'year': '2003'}
/ Ab initio Sampling of Polypeptide Conformations and the Prediction of Protein Structure by de Bakker (2003)10.1002/prot.10235
/ Proteins / Ab initio construction of polypeptide fragments: accuracy of loop decoy discrimination by an all-atom statistical potential and the AMBER force field with the Generalized Born solvation model by de Bakker (2003)- DeLano, W.L. (2002). The PyMOL Molecular Graphics System (http://www.pymol.org/).
10.1002/prot.10285
/ Proteins / Ab initio construction of polypeptide fragments: efficient generation of accurate, representative ensembles by DePristo (2003)10.1110/ps.0386903
/ Protein Sci. / Discrete restraint-based protein modeling and the Cα-trace problem by DePristo (2003)10.1016/j.str.2004.02.031
/ Structure / Heterogeneity and inaccuracy in protein structures solved by x-ray crystallography by DePristo (2004){'key': '10.1016/j.str.2005.06.008_bib13', 'series-title': 'Principles of Protein X-Ray Crystallography', 'author': 'Drenth', 'year': '1999'}
/ Principles of Protein X-Ray Crystallography by Drenth (1999)10.1107/S0108767391001071
/ Acta Crystallogr. A / Accurate bond and angle parameters for X-ray protein structure refinement by Engh (1991)10.1126/science.299.5613.1663a
/ Science / Structural genomics: current progress by Gerstein (2003)10.1038/nsmb0104-12
/ Nat. Struct. Mol. Biol. / Whither structural biology? by Harrison (2004)10.1016/0076-6879(85)15021-4
/ In Methods in Enzymology / Stereochemically restrained refinement of macromolecular structures by Hendrickson (1985)10.1107/S0108767392006044
/ Acta Crystallogr. A / Model bias in macromolecular crystal structures by Hodel (1992)-
Johnson, R.J.K., Christodoulou, J., Dumoulin, M., Caddy, G.L., Alocer, M.J., Murtagh, G.J., Kumita, J.R., Larsson, G., Robinson, C.V., Archer, D.B., Luisi, B., and Dobson, C.M. (2005). Rationalising Lysozyme Amyloidosis: Insights from the Structure and Solution Dynamics of T70N Lysozyme. J. Mol. Biol., in press
(
10.1016/j.jmb.2005.07.040
) 10.1002/j.1460-2075.1986.tb04287.x
/ EMBO J. / Using known substructures in protein model building and crystallography by Jones (1986)10.1107/S0108767390010224
/ Acta Crystallogr. A / Improved methods for building protein models in electron density maps and the location of errors in these models by Jones (1991)10.1016/S0969-2126(02)00743-8
/ Structure / Homo crystallographicus–quo vadis? by Kleywegt (2002)10.1107/S0907444996001783
/ Acta Crystallogr. D Biol. Crystallogr. / Efficient rebuilding of protein structures by Kleywegt (1996)10.1074/jbc.M204371200
/ J. Biol. Chem. / X-ray structure and ligand binding study of a moth chemosensory protein by Lartigue (2002)10.1002/1097-0134(20000815)40:3<389::AID-PROT50>3.0.CO;2-2
/ Proteins / The penultimate rotamer library by Lovell (2000)10.1002/prot.10286
/ Proteins / Structure validation by Cα geometry: ϕ, ψ, and Cβ deviation by Lovell (2003)10.1107/S0907444996012255
/ Acta Crystallogr. D Biol. Crystallogr. / Refinement of macromolecular structures by the maximum-likelihood method by Murshudov (1997)10.1107/S0108767393007597
/ Acta Crystallogr. A / AMoRe: an automated package for molecular replacement by Navaza (1994)10.1016/S0076-6879(97)76066-X
/ Methods Enzymol. / Processing of X-ray diffraction data collected in oscillation mode by Otwinowski (1997)10.1038/8263
/ Nat. Struct. Biol. / Automated protein model building combined with iterative structure refinement by Perrakis (1999)10.1107/S0907444901014007
/ Acta Crystallogr. D Biol. Crystallogr. / ARP/wARP and molecular replacement by Perrakis (2001)10.1006/jmbi.1993.1626
/ J. Mol. Biol. / Comparative protein modelling by satisfaction of spatial restraints by Sali (1993)10.1093/protein/gzg143
/ Protein Eng. / Advantages of fine-grained side chain conformer libraries for protein modelling by Shetty (2003)10.1107/S090744490402356X
/ Acta Crystallogr. D Biol. Crystallogr. / Introduction to macromolecular refinement by Tronrud (2004)10.1107/S0567740873003675
/ Acta Crystallogr. B / Refinement of the model of a protein: rubredoxin at 1.5 Å resolution by Watenpaugh (1973)10.1073/pnas.96.1.103
/ Proc. Natl. Acad. Sci. USA / Disordered water within a hydrophobic protein cavity visualized by X-ray crystallography by Yu (1999)
Dates
Type | When |
---|---|
Created | 19 years, 11 months ago (Sept. 14, 2005, 6:53 p.m.) |
Deposited | 6 years, 5 months ago (March 22, 2019, 12:37 p.m.) |
Indexed | 1 year ago (Aug. 3, 2024, 2:14 p.m.) |
Issued | 19 years, 11 months ago (Sept. 1, 2005) |
Published | 19 years, 11 months ago (Sept. 1, 2005) |
Published Print | 19 years, 11 months ago (Sept. 1, 2005) |
@article{DePristo_2005, title={Crystallographic Refinement by Knowledge-Based Exploration of Complex Energy Landscapes}, volume={13}, ISSN={0969-2126}, url={http://dx.doi.org/10.1016/j.str.2005.06.008}, DOI={10.1016/j.str.2005.06.008}, number={9}, journal={Structure}, publisher={Elsevier BV}, author={DePristo, Mark A. and de Bakker, Paul I.W. and Johnson, Russell J.K. and Blundell, Tom L.}, year={2005}, month=sep, pages={1311–1319} }