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Current Opinion in Structural Biology (78)
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Devos, D., & Russell, R. B. (2007). A more complete, complexed and structured interactome. Current Opinion in Structural Biology, 17(3), 370–377.

Authors 2
  1. Damien Devos (first)
  2. Robert B Russell (additional)
References 65 Referenced 42
  1. 10.1038/35051615 / Nature / The protein-protein interaction map of Helicobacter pylori by Rain (2001)
  2. 10.1038/nature03239 / Nature / Interaction network containing conserved and essential protein complexes in Escherichia coli by Butland (2005)
  3. 10.1073/pnas.97.3.1143 / Proc Natl Acad Sci USA / Toward a protein-protein interaction map of the budding yeast: a comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins by Ito (2000)
  4. 10.1038/35001009 / Nature / A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae by Uetz (2000)
  5. 10.1038/415141a / Nature / Functional organization of the yeast proteome by systematic analysis of protein complexes by Gavin (2002)
  6. 10.1038/415180a / Nature / Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry by Ho (2002)
  7. 10.1038/nature04532 / Nature / Proteome survey reveals modularity of the yeast cell machinery by Gavin (2006)
  8. 10.1038/nature04670 / Nature / Global landscape of protein complexes in the yeast Saccharomyces cerevisiae by Krogan (2006)
  9. 10.1038/nature03876 / Nature / Predictive models of molecular machines involved in Caenorhabditis elegans early embryogenesis by Gunsalus (2005)
  10. 10.1186/gb-2004-5-12-r96 / Genome Biol / A Drosophila protein-interaction map centered on cell-cycle regulators by Stanyon (2004)
  11. 10.1038/nature04209 / Nature / Towards a proteome-scale map of the human protein-protein interaction network by Rual (2005)
  12. 10.1016/j.cell.2005.08.029 / Cell / A human protein-protein interaction network: a resource for annotating the proteome by Stelzl (2005)
  13. 10.1126/science.1121018 / Science / The impact of structural genomics: expectations and outcomes by Chandonia (2006)
  14. 10.1186/1471-2105-8-86 / BMC Bioinformatics / Towards a comprehensive structural coverage of completed genomes: a structural genomics viewpoint by Marsden (2007)
  15. 10.1126/science.1092645 / Science / Structure-based assembly of protein complexes in yeast by Aloy (2004)
  16. 10.1126/science.1136174 / Science / Relating three-dimensional structures to protein networks provides evolutionary insights by Kim (2006)
  17. 10.1093/emboj/cdg359 / EMBO J / Diversity of protein-protein interactions by Nooren (2003)
  18. 10.1016/S0022-2836(02)01281-0 / J Mol Biol / Structural characterisation and functional significance of transient protein-protein interactions by Nooren (2003)
  19. 10.1016/S0968-0004(02)02204-1 / Trends Biochem Sci / The third dimension for protein interactions and complexes by Aloy (2002)
  20. 10.1016/S0014-5793(02)03427-0 / FEBS Lett / Potential artefacts in protein-interaction networks by Aloy (2002)
  21. 10.1038/nbt1002-991 / Nat Biotechnol / Analyzing yeast protein-protein interaction data obtained from different sources by Bader (2002)
  22. 10.1073/pnas.0409522102 / Proc Natl Acad Sci USA / Conserved patterns of protein interaction in multiple species by Sharan (2005)
  23. 10.1073/pnas.0606914104 / Proc Natl Acad Sci USA / Transcriptional regulation of protein complexes within and across species by Tan (2007)
  24. 10.1016/j.tim.2006.06.002 / Trends Microbiol / Capturing cellular machines by systematic screens of protein complexes by Gagneur (2006)
  25. 10.1186/gb-2006-7-6-223 / Genome Biol / The elusive yeast interactome by Goll (2006)
  26. 10.1186/gb-2006-7-11-120 / Genome Biol / How complete are current yeast and human protein-interaction networks? by Hart (2006)
  27. 10.1074/mcp.M600381-MCP200 / Mol Cell Proteomics / Towards a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae by Collins (2007)
  28. 10.1016/j.molcel.2006.03.012 / Mol Cell / A wiring of the human nucleolus by Hinsby (2006)
  29. 10.1038/nbt1295 / Nat Biotechnol / A human phenome-interactome network of protein complexes implicated in genetic disorders by Lage (2007)
  30. 10.1016/j.cell.2006.10.037 / Cell / Reconstitution, activities, and structure of the eukaryotic RNA exosome by Liu (2006)
  31. 10.1016/j.molcel.2006.07.016 / Mol Cell / Structure of an Hsp90-Cdc37-Cdk4 complex by Vaughan (2006)
  32. 10.1073/pnas.0603408104 / Proc Natl Acad Sci USA / Structural insights into the p97-Ufd1-Npl4 complex by Pye (2007)
  33. 10.1016/j.cell.2006.09.029 / Cell / The architecture of the multisubunit TRAPP I complex suggests a model for vesicle tethering by Kim (2006)
  34. 10.1016/j.cell.2006.10.030 / Cell / Molecular anatomy of a trafficking organelle by Takamori (2006)
  35. 10.1038/sj.embor.7400702 / EMBO Rep / Subunit architecture of multimeric complexes isolated directly from cells by Hernandez (2006)
  36. 10.1074/mcp.M600043-MCP200 / Mol Cell Proteomics / Probing genuine strong interactions and post-translational modifications in the heterogeneous yeast exosome protein complex by Synowsky (2006)
  37. 10.1038/nmeth972 / Nat Methods / Protein interaction screening by quantitative immunoprecipitation combined with knockdown (QUICK) by Selbach (2006)
  38. 10.1074/mcp.M600212-MCP200 / Mol Cell Proteomics / Distinct and overlapping sets of SUMO-1 and SUMO-2 target proteins revealed by quantitative proteomics by Vertegaal (2006)
  39. 10.1038/nbt1289 / Nat Biotechnol / An integrated mass spectrometric and computational framework for the analysis of protein interaction networks by Rinner (2007)
  40. 10.1016/j.sbi.2005.01.012 / Curr Opin Struct Biol / Protein complexes: structure prediction challenges for the 21st century by Aloy (2005)
  41. 10.1016/j.febslet.2005.02.014 / FEBS Lett / Structure-based systems biology: a zoom lens for the cell by Aloy (2005)
  42. 10.1038/nrm1859 / Nat Rev Mol Cell Biol / Structural systems biology: modelling protein interactions by Aloy (2006)
  43. 10.1016/j.sbi.2004.04.006 / Curr Opin Struct Biol / A structural perspective on protein-protein interactions by Russell (2004)
  44. 10.1016/j.jmb.2005.03.039 / J Mol Biol / Prediction of multimolecular assemblies by multiple docking by Inbar (2005)
  45. 10.1371/journal.pcbi.0020153 / PLoS Comput Biol / Structural modeling of protein interactions by analogy: application to PSD-95 by Korkin (2006)
  46. 10.1110/ps.062270707 / Protein Sci / Prediction of structures of multidomain proteins from structures of the individual domains by Wollacott (2007)
  47. 10.1016/j.jmb.2006.01.062 / J Mol Biol / Refinement of protein structures by iterative comparative modeling and cryoEM density fitting by Topf (2006)
  48. 10.1038/357543a0 / Nature / Proteins. One thousand families for the molecular biologist by Chothia (1992)
  49. 10.1038/nbt1018 / Nat Biotechnol / Ten thousand interactions for the molecular biologist by Aloy (2004)
  50. 10.1016/j.jmb.2006.09.042 / J Mol Biol / Biological units and their effect upon the properties and prediction of protein-protein interactions by Jefferson (2006)
  51. 10.1038/nature02555 / Nature / Evidence for dynamically organized modularity in the yeast protein-protein interaction network by Han (2004)
  52. {'key': '10.1016/j.sbi.2007.05.011_bib52', 'first-page': '161', 'article-title': 'Intrinsic protein disorder in complete genomes', 'volume': '11', 'author': 'Dunker', 'year': '2000', 'journal-title': 'Genome Inform Ser Workshop Genome Inform'} / Genome Inform Ser Workshop Genome Inform / Intrinsic protein disorder in complete genomes by Dunker (2000)
  53. 10.1016/j.jmb.2004.02.002 / J Mol Biol / Prediction and functional analysis of native disorder in proteins from the three kingdoms of life by Ward (2004)
  54. 10.1016/j.febslet.2005.04.005 / FEBS Lett / Linear motifs: evolutionary interaction switches by Neduva (2005)
  55. 10.1093/nar/gkl486 / Nucleic Acids Res / SLiMDisc: short, linear motif discovery, correcting for common evolutionary descent by Davey (2006)
  56. 10.1093/bioinformatics/btl020 / Bioinformatics / Discovering motif pairs at interaction sites from protein sequences on a proteome-wide scale by Li (2006)
  57. 10.1371/journal.pbio.0030405 / PLoS Biol / Systematic discovery of new recognition peptides mediating protein interaction networks by Neduva (2005)
  58. 10.1093/nar/gkl159 / Nucleic Acids Res / DILIMOT: discovery of linear motifs in proteins by Neduva (2006)
  59. 10.1093/nar/gkg545 / Nucleic Acids Res / ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins by Puntervoll (2003)
  60. 10.1371/journal.pcbi.0020100 / PLoS Comput Biol / Intrinsic disorder is a common feature of hub proteins from four eukaryotic interactomes by Haynes (2006)
  61. 10.1093/nar/gkl958 / Nucleic Acids Res / IntAct–open source resource for molecular interaction data by Kerrien (2007)
  62. 10.1093/bioinformatics/bth195 / Bioinformatics / The DISOPRED server for the prediction of protein disorder by Ward (2004)
  63. 10.1126/science.1105103 / Science / Dynamic complex formation during the yeast cell cycle by de Lichtenberg (2005)
  64. 10.1038/nrm1861 / Nat Rev Mol Cell Biol / A visual approach to proteomics by Nickell (2006)
  65. 10.1016/j.tips.2004.04.011 / Trends Pharmacol Sci / Small-molecule inhibitors of the p53 suppressor HDM2: have protein-protein interactions come of age as drug targets? by Fischer (2004)
Dates
Type When
Created 18 years, 2 months ago (June 16, 2007, 10:11 a.m.)
Deposited 5 years, 4 months ago (April 22, 2020, 11:58 p.m.)
Indexed 1 month, 2 weeks ago (July 2, 2025, 3:09 p.m.)
Issued 18 years, 2 months ago (June 1, 2007)
Published 18 years, 2 months ago (June 1, 2007)
Published Print 18 years, 2 months ago (June 1, 2007)
Funders 0

None

@article{Devos_2007, title={A more complete, complexed and structured interactome}, volume={17}, ISSN={0959-440X}, url={http://dx.doi.org/10.1016/j.sbi.2007.05.011}, DOI={10.1016/j.sbi.2007.05.011}, number={3}, journal={Current Opinion in Structural Biology}, publisher={Elsevier BV}, author={Devos, Damien and Russell, Robert B}, year={2007}, month=jun, pages={370–377} }