Crossref
journal-article
Elsevier BV
Journal of Structural Biology (78)
References
46
Referenced
550
10.1038/nature09423
/ Nature / The Ndc80 kinetochore complex forms oligomeric arrays along microtubules by Alushin (2010)10.7554/eLife.11182
/ eLife / Sampling the conformational space of the catalytic subunit of human γ-secretase by Bai (2015)10.1016/j.jsb.2011.12.020
/ J. Struct. Biol. / Real-space processing of helical filaments in SPARX by Behrmann (2012)10.1016/S0304-3991(97)00070-3
/ Ultramicroscopy / Distortion correction of tubular crystals: improvements in the acetylcholine receptor structure by Beroukhim (1997)10.1016/0304-3991(88)90226-4
/ Ultramicroscopy / The reconstruction of helical particles with variable pitch by Bluemke (1988)10.1016/j.ultramic.2013.06.004
/ Ultramicroscopy / High-resolution noise substitution to measure overfitting and validate resolution in 3D structure determination by single particle electron cryomicroscopy by Chen (2013)10.1016/j.cell.2015.02.005
/ Cell / Atomic structure of T6SS reveals interlaced array essential to function by Clemens (2015)10.1107/S0365110X52001635
/ Acta Crystallogr. / The structure of synthetic polypeptides. I. The transform of atoms on a helix by Cochran (1952)10.1006/jsbi.1996.0003
/ J. Struct. Biol. / MRC image processing programs by Crowther (1996)10.1038/217130a0
/ Nature / Reconstruction of three dimensional structures from electron micrographs by De Rosier (1968)10.1111/j.2517-6161.1977.tb01600.x
/ J. R. Stat. Soc. Ser. B / Maximum-likelihood from incomplete data via the EM algorithm by Dempster (1977)10.1016/0022-2836(70)90036-7
/ J. Mol. Biol. / Reconstruction of three-dimensional images from electron micrographs of structures with helical symmetry by DeRosier (1970)10.1016/j.jsb.2013.11.003
/ J. Struct. Biol. / SPRING – an image processing package for single-particle based helical reconstruction from electron cryomicrographs by Desfosses (2014)10.1016/S0076-6879(10)82005-1
/ Methods in Enzymology / Fourier-bessel reconstruction of helical assemblies by Diaz (2010)10.1016/S0304-3991(00)00062-0
/ Ultramicroscopy / A robust algorithm for the reconstruction of helical filaments using single-particle methods by Egelman (2000)10.1016/j.jsb.2006.05.015
/ J. Struct. Biol. / The iterative helical real space reconstruction method: Surmounting the problems posed by real polymers by Egelman (2007)10.1016/S0076-6879(10)82006-3
/ Methods Enzymol. / Reconstruction of helical filaments and tubes by Egelman (2010)10.7554/eLife.04969
/ eLife / Ambiguities in helical reconstruction by Egelman (2014)-
Fernandez-Leiro, R., Scheres, S., 2016. A pipeline approach to single-particle processing in RELION (No. biorxiv;078352v1).
(
10.1101/078352
) 10.1038/nature19948
/ Nature / Unravelling biological macromolecules with cryo-electron microscopy by Fernandez-Leiro (2016)10.1006/jsbi.1996.0030
/ J. Struct. Biol. / SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields by Frank (1996)10.1016/j.jsb.2014.12.002
/ J. Struct. Biol. / Seeing tobacco mosaic virus through direct electron detectors by Fromm (2015){'issue': '20', 'key': '10.1016/j.jsb.2017.02.003_b0115', 'first-page': '205', 'article-title': 'Outcome of the first electron microscopy validation task force meeting', 'volume': '1993', 'author': 'Henderson', 'year': '2012', 'journal-title': 'Struct. Lond. Engl.'}
/ Struct. Lond. Engl. / Outcome of the first electron microscopy validation task force meeting by Henderson (2012)10.1038/nmeth.3806
/ Nat. Methods / EMPIAR: a public archive for raw electron microscopy image data by Iudin (2016)10.7554/eLife.18722
/ eLife / Accelerated cryo-EM structure determination with parallelisation using GPUs in RELION-2 by Kimanius (2016)10.1107/S0365110X58000517
/ Acta Crystallogr. / Diffraction by helical structures by Klug (1958)10.1016/j.cell.2015.01.037
/ Cell / Structure of the Type VI secretion system contractile sheath by Kudryashev (2015)10.1073/pnas.1612034113
/ Proc. Natl. Acad. Sci. / X-ray and cryo-EM structures of monomeric and filamentous actin-like protein MamK reveal changes associated with polymerization by Löwe (2016)10.1016/j.jsb.2006.07.015
/ J. Struct. Biol. / Ruby-Helix: an implementation of helical image processing based on object-oriented scripting language by Metlagel (2007)10.1006/jsbi.1996.0027
/ J. Struct. Biol. / Image analysis of helical objects: the brandeis helical package by Owen (1996)10.1016/j.jsb.2014.03.012
/ J. Struct. Biol. / Frealix: model-based refinement of helical filament structures from electron micrographs by Rohou (2014)10.1016/j.jmb.2003.07.013
/ J. Mol. Biol. / Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy by Rosenthal (2003)10.1016/j.jmb.2007.05.088
/ J. Mol. Biol. / High-resolution electron microscopy of helical specimens: a fresh look at tobacco mosaic virus by Sachse (2007)10.1016/j.jsb.2012.09.006
/ J. Struct. Biol. / RELION: implementation of a Bayesian approach to cryo-EM structure determination by Scheres (2012)10.1016/j.jmb.2011.11.010
/ J. Mol. Biol. / A Bayesian view on cryo-EM structure determination by Scheres (2012)10.7554/eLife.03665
/ eLife / Beam-induced motion correction for sub-megadalton cryo-EM particles by Scheres (2014)10.1016/j.jsb.2014.11.010
/ J. Struct. Biol. / Semi-automated selection of cryo-EM particles in RELION-1.3 by Scheres (2015)10.1016/bs.mie.2016.04.012
/ Methods Enzymol. / Processing of structurally heterogeneous Cryo-EM data in RELION by Scheres (2016)10.1038/nmeth.2115
/ Nat. Methods / Prevention of overfitting in cryo-EM structure determination by Scheres (2012){'key': '10.1016/j.jsb.2017.02.003_b0200', 'first-page': '9017', 'article-title': 'High-resolution structure of the presynaptic RAD51 filament on single-stranded DNA by electron cryo-microscopy', 'volume': '44', 'author': 'Short', 'year': '2016', 'journal-title': 'Nucleic Acids Res.'}
/ Nucleic Acids Res. / High-resolution structure of the presynaptic RAD51 filament on single-stranded DNA by electron cryo-microscopy by Short (2016)10.1006/jsbi.1997.3851
/ J. Struct. Biol. / Three different approaches for calculating the three-dimensional structure of microtubules decorated with kinesin motor domains by Sosa (1997)10.1002/jemt.1060090404
/ J. Electron Microsc. Tech. / Computer image processing of electron micrographs of biological structures with helical symmetry by Stewart (1988)10.1016/j.jsb.2006.05.009
/ J. Struct. Biol. / EMAN2: an extensible image processing suite for electron microscopy by Tang (2007)10.1016/0304-3991(95)00057-8
/ Ultramicroscopy / PHOELIX: a package for semi-automated helical reconstruction by Whittaker (1995)10.7554/eLife.01489
/ eLife / Structural basis for the prion-like MAVS filaments in antiviral innate immunity by Xu (2014)10.7554/eLife.07546
/ eLife / Correction: structural basis for the prion-like MAVS filaments in antiviral innate immunity by Xu (2015)
Dates
Type | When |
---|---|
Created | 8 years, 6 months ago (Feb. 11, 2017, 2:01 a.m.) |
Deposited | 1 year, 2 months ago (June 22, 2024, 8:31 a.m.) |
Indexed | 1 day, 14 hours ago (Aug. 31, 2025, 6:22 a.m.) |
Issued | 8 years, 3 months ago (June 1, 2017) |
Published | 8 years, 3 months ago (June 1, 2017) |
Published Print | 8 years, 3 months ago (June 1, 2017) |
@article{He_2017, title={Helical reconstruction in RELION}, volume={198}, ISSN={1047-8477}, url={http://dx.doi.org/10.1016/j.jsb.2017.02.003}, DOI={10.1016/j.jsb.2017.02.003}, number={3}, journal={Journal of Structural Biology}, publisher={Elsevier BV}, author={He, Shaoda and Scheres, Sjors H.W.}, year={2017}, month=jun, pages={163–176} }