DOI: 10.1016/j.jsb.2008.03.002. Software tools for molecular microscopy

10.1016/j.jsb.2008.03.002

Crossref journal-article

Elsevier BV

Journal of Structural Biology (78)

Bibliography

Smith, R., & Carragher, B. (2008). Software tools for molecular microscopy. Journal of Structural Biology, 163(3), 224â228.

Authors 2

Ross Smith (first)
Bridget Carragher (additional)

References 29 Referenced 8

10.1006/jsbi.1996.0001 / J. Struct. Biol. / Editorial by Aebi (1996)
10.1016/j.jsb.2006.07.019 / J. Struct. Biol. / SPIRE: the spider reconstruction engine by Baxter (2007)
10.1006/jsbi.1996.0002 / J. Struct. Biol. / Advances in computational image processing for microscopy by Carragher (1996)
10.1016/j.jsb.2006.08.010 / J. Struct. Biol. / Implementation and performance evaluation of reconstruction algorithms on graphics processors by Castaño Díez (2007)
10.1006/jsbi.1996.0003 / J. Struct. Biol. / MRC image processing programs by Crowther (1996)
10.1016/S1047-8477(02)00002-3 / J. Struct. Biol. / A relational database for cryoEM: experience at one year and 50,000 images by Fellmann (2002)
10.1006/jsbi.1996.0030 / J. Struct. Biol. / SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields by Frank (1996)
10.1016/j.jsb.2006.07.020 / J. Struct. Biol. / 2dx—user-friendly image processing for 2D crystals by Gipson (2007)
10.1016/0304-3991(92)90028-I / Ultramicroscopy / A brief survey of software packages for image processing in biological electron microscopy by Hegerl (1992)
10.1006/jsbi.1996.0006 / J. Struct. Biol. / The EM program package: a platform for image processing in biological electron microscopy by Hegerl (1996)
10.1016/j.jsb.2003.09.009 / J. Struct. Biol. / EMDep: a web-based system for the deposition and validation of high-resolution electron microscopy macromolecular structural information by Henrick (2003)
10.1016/j.jsb.2005.06.001 / J. Struct. Biol. / Common conventions for interchange and archiving of three-dimensional electron microscopy information in structural biology by Heymann (2005)
{'key': '10.1016/j.jsb.2008.03.002_bib13', 'first-page': '312', 'article-title': 'Common conventions for interchange and archiving of three-dimensional electron microscopy information in structural biology', 'volume': '153', 'author': 'Heymann', 'year': '2006', 'journal-title': 'Corrigendum'} / Corrigendum / Common conventions for interchange and archiving of three-dimensional electron microscopy information in structural biology by Heymann (2006)
10.1016/j.jsb.2006.07.003 / J. Struct. Biol. / SPARX, a new environment for cryo-EM image processing by Hohn (2007)
10.1006/jsbi.1999.4174 / J. Struct. Biol. / EMAN: semiautomated software for high-resolution single-particle reconstructions by Ludtke (1999)
10.1016/j.jsb.2004.10.006 / J. Struct. Biol. / TOM software toolbox: acquisition and analysis for electron tomography by Nickell (2005)
{'key': '10.1016/j.jsb.2008.03.002_bib18', 'series-title': 'X-Window System', 'year': '1990'} / X-Window System (1990)
{'key': '10.1016/j.jsb.2008.03.002_bib19', 'series-title': 'Parallel programming with MPI', 'author': 'Pacheco', 'year': '1996'} / Parallel programming with MPI by Pacheco (1996)
10.1016/j.jsb.2006.01.003 / J. Struct. Biol. / Estimation of variance in single-particle reconstruction using the bootstrap technique by Penczek (2006)
10.1016/S0304-3991(79)80044-3 / Ultramicroscopy / Digital image processing: The semper system by Saxton (1979)
10.1016/j.jmb.2005.02.031 / J. Mol. Biol. / Maximum-likelihood multi-reference refinement for electron microscopy images by Scheres (2005)
10.1006/jsbi.1998.4014 / J. Struct. Biol. / A maximum-likelihood approach to single-particle image refinement by Sigworth (1998)
10.1006/jsbi.1996.0007 / J. Struct. Biol. / The micrograph data processing program by Smith (1996)
10.1016/j.jsb.2006.04.005 / J. Struct. Biol. / Automated cryoEM data acquisition and analysis of 284,742 particles of GroEL by Stagg (2006)
10.1016/j.jsb.2005.03.010 / J. Struct. Biol. / Automated molecular microscopy: the new Leginon system by Suloway (2005)
10.1016/j.jsb.2006.05.009 / J. Struct. Biol. / EMAN2: an extensible image processing suite for electron microscopy by Tang (2007)
10.1006/jsbi.1996.0011 / J. Struct. Biol. / Digital image processing of electron micrographs: the PIC system-III by Trus (1996)
10.1006/jsbi.1996.0004 / J. Struct. Biol. / A new generation of the IMAGIC image processing system by van Heel (1996)
10.1016/j.jsb.2006.05.011 / J. Struct. Biol. / The parallelization of SPIDER on distributed-memory computers using MPI by Yang (2007)

Dates

Type	When
Created	17 years, 5 months ago (March 14, 2008, 10:06 a.m.)
Deposited	6 years, 8 months ago (Dec. 30, 2018, 9:20 p.m.)
Indexed	3 years, 4 months ago (April 2, 2022, 11:56 p.m.)
Issued	17 years ago (Sept. 1, 2008)
Published	17 years ago (Sept. 1, 2008)
Published Print	17 years ago (Sept. 1, 2008)

Funders 0

None

BibTeX

@article{Smith_2008, title={Software tools for molecular microscopy}, volume={163}, ISSN={1047-8477}, url={http://dx.doi.org/10.1016/j.jsb.2008.03.002}, DOI={10.1016/j.jsb.2008.03.002}, number={3}, journal={Journal of Structural Biology}, publisher={Elsevier BV}, author={Smith, Ross and Carragher, Bridget}, year={2008}, month=sep, pages={224–228} }

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