DOI: 10.1016/j.jmgm.2003.12.011. Exploring the protein folding free energy landscape: coupling replica exchange method with P3ME/RESPA algorithm

Exploring the protein folding free energy landscape: coupling replica exchange method with P3ME/RESPA algorithm

10.1016/j.jmgm.2003.12.011

Crossref journal-article

Elsevier BV

Journal of Molecular Graphics and Modelling (78)

Bibliography

Zhou, R. (2004). Exploring the protein folding free energy landscape: coupling replica exchange method with P3ME/RESPA algorithm. Journal of Molecular Graphics and Modelling, 22(5), 451â463.

Authors 1

Ruhong Zhou (first)

References 51 Referenced 65

10.1016/S0959-440X(97)80023-1 / Curr. Top. Struct. Biol. by Berne (1997)
10.1103/PhysRevLett.58.86 / Phys. Rev. Lett. by Swendsen (1987)
10.1002/jcc.540120509 / J. Comp. Chem. by Nayeem (1991)
10.1063/1.463756 / J. Chem. Phys. by Freeman (1992)
10.1209/0295-5075/19/6/002 / Europhys. Lett. by Marinari (1992)
10.1143/JPSJ.65.1604 / J. Phys. Soc. Jpn. by Hukushima (1996)
10.1021/jp9920949 / J. Phys. Chem. by Faken (1999)
10.1002/(SICI)1521-3773(19980420)37:7<868::AID-ANIE868>3.0.CO;2-H / Angrew Chem. Int. Ed. Engl. by Dobson (1998)
10.1073/pnas.95.19.11037 / Proc. Natl. Acad. Sci. U.S.A. by Brooks (1998)
10.1126/science.282.5389.740 / Science by Duan (1998)
E. Marinari, G. Parisi, J. Ruiz-Lorenzo, World Scientific, Singapore, 1998, p. 59. (10.1103/PhysRevB.58.14852)
10.1063/1.475210 / J. Chem. Phys. by Zhou (1997)
10.1016/S0009-2614(00)00999-4 / Chem. Phys. Lett. by Sugita (2000)
10.1063/1.1385159 / J. Chem. Phys. by Zhou (2001)
10.1063/1.463137 / J. Chem. Phys. by Tuckerman (1992)
R.W. Hockney, J.W. Eastwood, Computer Simulations Using Particles, IOP, Bristol, 1988. (10.1887/0852743920)
10.1038/36626 / Nature by Munoz (1997)
10.1073/pnas.95.11.5872 / Proc. Natl. Acad. Sci. U.S.A. by Munoz (1998)
10.1038/nsb0994-584 / Nat. Struct. Biol. by Blanco (1994)
10.1073/pnas.96.16.9062 / Proc. Natl. Acad. Sci. U.S.A. by Pande (1999)
10.1006/jmbi.2001.5033 / J. Mol. Biol. by Zagrovic (2001)
10.1073/pnas.96.16.9068 / Proc. Natl. Acad. Sci. U.S.A. by Dinner (1999)
10.1002/1097-0134(20010215)42:3<345::AID-PROT50>3.0.CO;2-H / Proteins by Garcia (2001)
10.1110/ps.8.10.2130 / Protein Sci. by Roccatano (1999)
10.1016/S0006-3495(99)77127-4 / Biophys. J. by Kolinski (1999)
10.1006/jmbi.2000.3518 / J. Mol. Biol. by Ma (2000)
10.1073/pnas.97.6.2544 / Proc. Natl. Acad. Sci. U.S.A. by Klimov (2000)
10.1073/pnas.201543998 / Proc. Natl. Acad. Sci. U.S.A. by Zhou (2001)
10.1073/pnas.142430099 / Proc. Natl. Acad. Sci. U.S.A. by Zhou (2002)
10.1038/nsb798 / Nat. Struct. Biol. by Neidigh (2002)
10.1021/ja0279141 / J. Am. Chem. Soc. by Qiu (2002)
10.1021/ja0273851 / J. Am. Chem. Soc. by Simmerling (2002)
10.1021/ja028604l / J. Am. Chem. Soc. by Snow (2002)
10.1073/pnas.1330954100 / Proc. Natl. Sci. Acad. U.S.A. by Pitera (2003)
10.1063/1.470006 / J. Chem. Phys. by Zhou (1995)
10.1063/1.464397 / J. Chem. Phys. by Tom (1993)
10.1063/1.477414 / J. Chem. Phys. by Deserno (1998)
10.1063/1.471067 / J. Chem. Phys. by Procacci (1996)
10.1021/ja9621760 / J. Am. Chem. Soc. by Jorgensen (1996)
10.1016/0021-9991(83)90014-1 / J. Comp. Phys. by Andersen (1983)
10.1103/PhysRevLett.63.1195 / Phys. Rev. Lett. by Ferrenberg (1989)
10.1103/PhysRevLett.68.2696 / Phys. Rev. Lett. by Garcia (1992)
10.1002/prot.340230412 / Proteins by Frishman (1995)
10.1021/ja962310g / J. Am. Chem. Soc. by Beachy (1997)
10.1073/pnas.042496899 / Proc. Natl. Acad. Sci. U.S.A. by Garcia (2002)
10.1002/prot.10483 / Proteins by Zhou (2003)
10.1073/pnas.94.12.6170 / Proc. Natl. Acad. Sci. U.S.A. by Wolynes (1997)
10.1038/nsb0197-10 / Nat. Struct. Biol. by Dill (1997)
C. Waldburger, J. Schildbach, R. Sauer, Nat. Struct. Biol. (1995) 2. (10.1038/nsb0295-122)
A. Horovitz, L. Serrano, B. Avron, M. Bycroft, A. Fersht, J. Mol. Biol. (1990) 216. (10.1016/S0022-2836(99)80018-7)
10.1073/pnas.2233312100 / Proc. Natl. Sci. Acad. U.S.A. by Zhou (2003)

Dates

Type	When
Created	21 years, 6 months ago (Feb. 5, 2004, 5:35 a.m.)
Deposited	5 years, 5 months ago (March 30, 2020, 8:38 a.m.)
Indexed	4 weeks ago (Aug. 2, 2025, 12:45 a.m.)
Issued	21 years, 3 months ago (May 1, 2004)
Published	21 years, 3 months ago (May 1, 2004)
Published Print	21 years, 3 months ago (May 1, 2004)

Funders 0

None

BibTeX

@article{Zhou_2004, title={Exploring the protein folding free energy landscape: coupling replica exchange method with P3ME/RESPA algorithm}, volume={22}, ISSN={1093-3263}, url={http://dx.doi.org/10.1016/j.jmgm.2003.12.011}, DOI={10.1016/j.jmgm.2003.12.011}, number={5}, journal={Journal of Molecular Graphics and Modelling}, publisher={Elsevier BV}, author={Zhou, Ruhong}, year={2004}, month=may, pages={451–463} }

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      "first-page": "9521",
      "DOI": "10.1021/jp9920949",
      "volume": "103",
      "author": "Faken",
      "year": "1999",
      "journal-title": "J. Phys. Chem."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB8",
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      "first-page": "868",
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      "volume": "37",
      "author": "Dobson",
      "year": "1998",
      "journal-title": "Angrew Chem. Int. Ed. Engl."
    },
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      "first-page": "11037",
      "DOI": "10.1073/pnas.95.19.11037",
      "volume": "95",
      "author": "Brooks",
      "year": "1998",
      "journal-title": "Proc. Natl. Acad. Sci. U.S.A."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB10",
      "doi-asserted-by": "crossref",
      "first-page": "740",
      "DOI": "10.1126/science.282.5389.740",
      "volume": "282",
      "author": "Duan",
      "year": "1998",
      "journal-title": "Science"
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB11",
      "doi-asserted-by": "crossref",
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    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB12",
      "doi-asserted-by": "crossref",
      "first-page": "9185",
      "DOI": "10.1063/1.475210",
      "volume": "107",
      "author": "Zhou",
      "year": "1997",
      "journal-title": "J. Chem. Phys."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB13",
      "doi-asserted-by": "crossref",
      "first-page": "261",
      "DOI": "10.1016/S0009-2614(00)00999-4",
      "volume": "329",
      "author": "Sugita",
      "year": "2000",
      "journal-title": "Chem. Phys. Lett."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB14",
      "doi-asserted-by": "crossref",
      "first-page": "2348",
      "DOI": "10.1063/1.1385159",
      "volume": "115",
      "author": "Zhou",
      "year": "2001",
      "journal-title": "J. Chem. Phys."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB15",
      "doi-asserted-by": "crossref",
      "first-page": "1990",
      "DOI": "10.1063/1.463137",
      "volume": "97",
      "author": "Tuckerman",
      "year": "1992",
      "journal-title": "J. Chem. Phys."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB16",
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      "DOI": "10.1887/0852743920"
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB17",
      "doi-asserted-by": "crossref",
      "first-page": "196",
      "DOI": "10.1038/36626",
      "volume": "390",
      "author": "Munoz",
      "year": "1997",
      "journal-title": "Nature"
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB18",
      "doi-asserted-by": "crossref",
      "first-page": "5872",
      "DOI": "10.1073/pnas.95.11.5872",
      "volume": "95",
      "author": "Munoz",
      "year": "1998",
      "journal-title": "Proc. Natl. Acad. Sci. U.S.A."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB19",
      "doi-asserted-by": "crossref",
      "first-page": "584",
      "DOI": "10.1038/nsb0994-584",
      "volume": "1",
      "author": "Blanco",
      "year": "1994",
      "journal-title": "Nat. Struct. Biol."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB20",
      "doi-asserted-by": "crossref",
      "first-page": "9062",
      "DOI": "10.1073/pnas.96.16.9062",
      "volume": "96",
      "author": "Pande",
      "year": "1999",
      "journal-title": "Proc. Natl. Acad. Sci. U.S.A."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB21",
      "doi-asserted-by": "crossref",
      "first-page": "151",
      "DOI": "10.1006/jmbi.2001.5033",
      "volume": "313",
      "author": "Zagrovic",
      "year": "2001",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB22",
      "doi-asserted-by": "crossref",
      "first-page": "9068",
      "DOI": "10.1073/pnas.96.16.9068",
      "volume": "96",
      "author": "Dinner",
      "year": "1999",
      "journal-title": "Proc. Natl. Acad. Sci. U.S.A."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB23",
      "doi-asserted-by": "crossref",
      "first-page": "345",
      "DOI": "10.1002/1097-0134(20010215)42:3<345::AID-PROT50>3.0.CO;2-H",
      "volume": "42",
      "author": "Garcia",
      "year": "2001",
      "journal-title": "Proteins"
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB24",
      "doi-asserted-by": "crossref",
      "first-page": "2130",
      "DOI": "10.1110/ps.8.10.2130",
      "volume": "10",
      "author": "Roccatano",
      "year": "1999",
      "journal-title": "Protein Sci."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB25",
      "doi-asserted-by": "crossref",
      "first-page": "2942",
      "DOI": "10.1016/S0006-3495(99)77127-4",
      "volume": "77",
      "author": "Kolinski",
      "year": "1999",
      "journal-title": "Biophys. J."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB26",
      "doi-asserted-by": "crossref",
      "first-page": "1091",
      "DOI": "10.1006/jmbi.2000.3518",
      "volume": "296",
      "author": "Ma",
      "year": "2000",
      "journal-title": "J. Mol. Biol."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB27",
      "doi-asserted-by": "crossref",
      "first-page": "2544",
      "DOI": "10.1073/pnas.97.6.2544",
      "volume": "97",
      "author": "Klimov",
      "year": "2000",
      "journal-title": "Proc. Natl. Acad. Sci. U.S.A."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB28",
      "doi-asserted-by": "crossref",
      "first-page": "14931",
      "DOI": "10.1073/pnas.201543998",
      "volume": "98",
      "author": "Zhou",
      "year": "2001",
      "journal-title": "Proc. Natl. Acad. Sci. U.S.A."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB29",
      "doi-asserted-by": "crossref",
      "first-page": "12777",
      "DOI": "10.1073/pnas.142430099",
      "volume": "99",
      "author": "Zhou",
      "year": "2002",
      "journal-title": "Proc. Natl. Acad. Sci. U.S.A."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB30",
      "doi-asserted-by": "crossref",
      "first-page": "425",
      "DOI": "10.1038/nsb798",
      "volume": "9",
      "author": "Neidigh",
      "year": "2002",
      "journal-title": "Nat. Struct. Biol."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB31",
      "doi-asserted-by": "crossref",
      "first-page": "12952",
      "DOI": "10.1021/ja0279141",
      "volume": "124",
      "author": "Qiu",
      "year": "2002",
      "journal-title": "J. Am. Chem. Soc."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB32",
      "doi-asserted-by": "crossref",
      "first-page": "11258",
      "DOI": "10.1021/ja0273851",
      "volume": "124",
      "author": "Simmerling",
      "year": "2002",
      "journal-title": "J. Am. Chem. Soc."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB33",
      "doi-asserted-by": "crossref",
      "first-page": "14548",
      "DOI": "10.1021/ja028604l",
      "volume": "124",
      "author": "Snow",
      "year": "2002",
      "journal-title": "J. Am. Chem. Soc."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB34",
      "doi-asserted-by": "crossref",
      "first-page": "7587",
      "DOI": "10.1073/pnas.1330954100",
      "volume": "100",
      "author": "Pitera",
      "year": "2003",
      "journal-title": "Proc. Natl. Sci. Acad. U.S.A."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB35",
      "doi-asserted-by": "crossref",
      "first-page": "9444",
      "DOI": "10.1063/1.470006",
      "volume": "103",
      "author": "Zhou",
      "year": "1995",
      "journal-title": "J. Chem. Phys."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB36",
      "doi-asserted-by": "crossref",
      "first-page": "10089",
      "DOI": "10.1063/1.464397",
      "volume": "98",
      "author": "Tom",
      "year": "1993",
      "journal-title": "J. Chem. Phys."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB37",
      "doi-asserted-by": "crossref",
      "first-page": "7678",
      "DOI": "10.1063/1.477414",
      "volume": "109",
      "author": "Deserno",
      "year": "1998",
      "journal-title": "J. Chem. Phys."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB38",
      "doi-asserted-by": "crossref",
      "first-page": "3003",
      "DOI": "10.1063/1.471067",
      "volume": "104",
      "author": "Procacci",
      "year": "1996",
      "journal-title": "J. Chem. Phys."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB39",
      "doi-asserted-by": "crossref",
      "first-page": "11225",
      "DOI": "10.1021/ja9621760",
      "volume": "118",
      "author": "Jorgensen",
      "year": "1996",
      "journal-title": "J. Am. Chem. Soc."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB40",
      "doi-asserted-by": "crossref",
      "first-page": "24",
      "DOI": "10.1016/0021-9991(83)90014-1",
      "volume": "52",
      "author": "Andersen",
      "year": "1983",
      "journal-title": "J. Comp. Phys."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB41",
      "doi-asserted-by": "crossref",
      "first-page": "1195",
      "DOI": "10.1103/PhysRevLett.63.1195",
      "volume": "63",
      "author": "Ferrenberg",
      "year": "1989",
      "journal-title": "Phys. Rev. Lett."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB42",
      "doi-asserted-by": "crossref",
      "first-page": "2696",
      "DOI": "10.1103/PhysRevLett.68.2696",
      "volume": "68",
      "author": "Garcia",
      "year": "1992",
      "journal-title": "Phys. Rev. Lett."
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB43",
      "doi-asserted-by": "crossref",
      "first-page": "566",
      "DOI": "10.1002/prot.340230412",
      "volume": "23",
      "author": "Frishman",
      "year": "1995",
      "journal-title": "Proteins"
    },
    {
      "key": "10.1016/j.jmgm.2003.12.011_BIB44",
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