Crossref journal-article
Elsevier BV
Journal of Molecular Biology (78)
Bibliography

Agarwal, D., Gregory, S. T., & O’Connor, M. (2011). Error-Prone and Error-Restrictive Mutations Affecting Ribosomal Protein S12. Journal of Molecular Biology, 410(1), 1–9.

Authors 3
  1. Deepali Agarwal (first)
  2. Steven T Gregory (additional)
  3. Michael O'Connor (additional)
References 38 Referenced 65
  1. 10.1261/rna.294907 / RNA / The frequency of translational misreading errors in E. coli is largely determined by tRNA competition by Kramer (2007)
  2. {'key': '10.1016/j.jmb.2011.04.068_bb0010', 'series-title': 'Recoding: Expansion of Decoding Rules Enriches Gene Expression', 'first-page': '321', 'article-title': 'Mutants that affect recoding', 'author': 'Dinman', 'year': '2010'} / Recoding: Expansion of Decoding Rules Enriches Gene Expression / Mutants that affect recoding by Dinman (2010)
  3. 10.1128/MR.53.3.273-298.1989 / Microbiol. Rev. / Errors and alternatives in reading the universal genetic code by Parker (1989)
  4. 10.1046/j.1365-2958.2002.03173.x / Mol. Microbiol. / Compensatory adaptation to the deleterious effect of antibiotic resistance in Salmonella typhimurium by Maisnier-Patin (2002)
  5. 10.1006/jmbi.2001.4676 / J. Mol. Biol. / Streptomycin-resistant and streptomycin-dependent mutants of the extreme thermophile Thermus thermophilus by Gregory (2001)
  6. 10.1146/annurev.biochem.74.061903.155440 / Annu. Rev. Biochem. / Structural insights into translational fidelity by Ogle (2005)
  7. 10.1128/JB.183.17.4958-4963.2001 / J. Bacteriol. / Construction of an in vivo nonsense readthrough assay system and functional analysis of ribosomal proteins S12, S4, and S5 in Bacillus subtilis by Inaoka (2001)
  8. 10.1016/S0021-9258(18)71592-5 / J. Biol. Chem. / Chloroplast ribosomal protein gene rps12 of Chlamydomonas reinhardtii. Wild-type sequence, mutation to streptomycin resistance and dependence, and function in Escherichia coli by Liu (1989)
  9. 10.1007/BF00328706 / Mol. Gen. Genet. / Kinetic impairment of restrictive streptomycin-resistant ribosomes by Bohman (1984)
  10. 10.1016/j.molcel.2010.06.009 / Mol. Cell / Hyperaccurate and error-prone ribosomes exploit distinct mechanisms during tRNA selection by Zaher (2010)
  11. 10.1016/0022-2836(69)90336-2 / J. Mol. Biol. / A ribosomal ambiguity mutation by Rosset (1969)
  12. 10.1007/BF00329777 / Mol. Gen. Genet. / Effect of different mutations in ribosomal protein S5 of Escherichia coli on translational fidelity by Piepersberg (1975)
  13. 10.1016/S0300-9084(86)80164-X / Biochimie / Functional interactions between mutated forms of ribosomal proteins S4, S5 and S12 by Andersson (1986)
  14. 10.1046/j.1365-2958.1999.01142.x / Mol. Microbiol. / Novel ribosomal mutations affecting translational accuracy, antibiotic resistance and virulence of Salmonella typhimurium by Bjorkman (1999)
  15. 10.1016/j.biochi.2006.04.013 / Biochimie / The ribosome's response to codon–anticodon mismatches by Daviter (2006)
  16. 10.1016/j.cub.2005.07.018 / Curr. Biol. / Fidelity in protein synthesis by Cochella (2005)
  17. 10.1126/science.1060612 / Science / Recognition of cognate transfer RNA by the 30S ribosomal subunit by Ogle (2001)
  18. 10.1016/S0092-8674(02)01086-3 / Cell / Selection of tRNA by the ribosome requires a transition from an open to a closed form by Ogle (2002)
  19. 10.1128/JB.173.12.3635-3643.1991 / J. Bacteriol. / Mutant ribosomes can generate dominant kirromycin resistance by Tubulekas (1991)
  20. 10.1016/j.jmb.2007.10.003 / J. Mol. Biol. / Mutational analysis of S12 protein and implications for the accuracy of decoding by the ribosome by Sharma (2007)
  21. 10.1261/rna.1530509 / RNA / Accuracy modulating mutations of the ribosomal protein S4–S5 interface do not necessarily destabilize the rps4–rps5 protein–protein interaction by Vallabhaneni (2009)
  22. 10.1126/science.1179700 / Science / The crystal structure of the ribosome bound to EF-Tu and aminoacyl-tRNA by Schmeing (2009)
  23. 10.1126/science.1175275 / Science / Structures of the ribosome in intermediate states of ratcheting by Zhang (2009)
  24. 10.1038/35030019 / Nature / Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics by Carter (2000)
  25. 10.1111/j.1365-2958.1993.tb01694.x / Mol. Microbiol. / Double, independent mutational events in the rpsL gene of Escherichia coli: an example of hypermutability? by Timms (1993)
  26. 10.1093/nar/19.14.3973 / Nucleic Acids Res. / Mutations in the 915 region of Escherichia coli 16S ribosomal RNA reduce the binding of streptomycin to the ribosome by Leclerc (1991)
  27. 10.1093/nar/16.20.9631 / Nucleic Acids Res. / A mutation in the 530 loop of Escherichia coli 16S ribosomal RNA causes resistance to streptomycin by Melancon (1988)
  28. 10.1261/rna.1355709 / RNA / A signal relay between ribosomal protein S12 and elongation factor EF-Tu during decoding of mRNA by Gregory (2009)
  29. 10.1128/JB.187.10.3548-3550.2005 / J. Bacteriol. / Severity of the streptomycin resistance and streptomycin dependence phenotypes of ribosomal protein S12 of Thermus thermophilus depends on the identity of highly conserved amino acid residues by Carr (2005)
  30. 10.1073/pnas.120163297 / Proc. Natl Acad. Sci. USA / One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products by Datsenko (2000)
  31. 10.1016/j.mimet.2009.07.017 / J. Microbiol. Methods / Variations in MIC value caused by differences in experimental protocol by Schuurmans (2009)
  32. 10.1016/j.bbrc.2010.01.021 / Biochem. Biophys. Res. Commun. / Mutagenesis of the modified bases, m(5)U1939 and psi2504, in Escherichia coli 23S rRNA by Persaud (2010)
  33. 10.1093/nar/25.6.1185 / Nucleic Acids Res. / Decoding fidelity at the ribosomal A and P sites: influence of mutations in three different regions of the decoding domain in 16S rRNA by O'Connor (1997)
  34. 10.1073/pnas.90.20.9538 / Proc. Natl Acad. Sci. USA / An accuracy center in the ribosome conserved over 2 billion years by Alksne (1993)
  35. 10.1016/j.jmb.2006.11.047 / J. Mol. Biol. / Compensatory evolution reveals functional interactions between ribosomal proteins S12, L14 and L19 by Maisnier-Patin (2007)
  36. 10.1007/BF00299141 / Mol. Gen. Genet. / Mutant sequences in the rpsL gene of Escherichia coli B/r: mechanistic implications for spontaneous and ultraviolet light mutagenesis by Timms (1992)
  37. 10.1007/BF00268753 / Mol. Gen. Genet. / Cooperative control of translational fidelity by ribosomal proteins in Escherichia coli. II. Localization of amino acid replacements in proteins S5 and S12 altered in double mutants resistant to neamine by Yaguchi (1975)
  38. 10.1016/0022-2836(76)90124-8 / J. Mol. Biol. / Alteration of ribosomal protein S17 by mutation linked to neamine resistance in Escherichia coli. II. Localization of the amino acid replacement in protein S17 from a meaA mutant by Yaguchi (1976)
Dates
Type When
Created 14 years, 3 months ago (May 10, 2011, 1:04 a.m.)
Deposited 4 years, 4 months ago (April 4, 2021, 1:27 p.m.)
Indexed 2 months ago (June 30, 2025, 9:25 a.m.)
Issued 14 years, 2 months ago (July 1, 2011)
Published 14 years, 2 months ago (July 1, 2011)
Published Print 14 years, 2 months ago (July 1, 2011)
Funders 1
  1. National Science Foundation 10.13039/100000001

    Region: Americas

    gov (National government)

    Labels4
    1. U.S. National Science Foundation
    2. NSF
    3. US NSF
    4. USA NSF

@article{Agarwal_2011, title={Error-Prone and Error-Restrictive Mutations Affecting Ribosomal Protein S12}, volume={410}, ISSN={0022-2836}, url={http://dx.doi.org/10.1016/j.jmb.2011.04.068}, DOI={10.1016/j.jmb.2011.04.068}, number={1}, journal={Journal of Molecular Biology}, publisher={Elsevier BV}, author={Agarwal, Deepali and Gregory, Steven T and O’Connor, Michael}, year={2011}, month=jul, pages={1–9} }