DOI: 10.1016/j.jmb.2008.10.034. Structure of the Type III Secretion Recognition Protein YscU from Yersinia enterocolitica

Structure of the Type III Secretion Recognition Protein YscU from Yersinia enterocolitica

10.1016/j.jmb.2008.10.034

Crossref journal-article

Elsevier BV

Journal of Molecular Biology (78)

Bibliography

Wiesand, U., Sorg, I., Amstutz, M., Wagner, S., van den Heuvel, J., LÃ¼hrs, T., Cornelis, G. R., & Heinz, D. W. (2009). Structure of the Type III Secretion Recognition Protein YscU from Yersinia enterocolitica. Journal of Molecular Biology, 385(3), 854â866.

Authors 8

Ulrich Wiesand (first)
Isabel Sorg (additional)
Marlise Amstutz (additional)
Stefanie Wagner (additional)
Joop van den Heuvel (additional)
Thorsten Lührs (additional)
Guy R. Cornelis (additional)
Dirk W. Heinz (additional)

References 49 Referenced 38

10.1146/annurev.micro.57.030502.090832 / Annu. Rev. Microbiol. / How bacteria assemble flagella by Macnab (2003)
10.1083/jcb.147.3.683 / J. Cell Biol. / The tripartite type III secreton of Shigella flexneri inserts IpaB and IpaC into host membranes by Blocker (1999)
10.1046/j.1365-2958.2001.02200.x / Mol. Microbiol. / Structure and composition of the Shigella flexneri “needle complex”, a part of its type III secreton by Blocker (2001)
10.1126/science.1102610 / Science / Structural insights into the assembly of the type III secretion needle complex by Marlovits (2004)
10.1074/jbc.M509644200 / J. Biol. Chem. / Shigella Spa33 is an essential C-ring component of type III secretion machinery by Morita-Ishihara (2006)
10.1126/science.280.5363.602 / Science / Supramolecular structure of the Salmonella typhimurium type III protein secretion system by Kubori (1998)
10.1128/JB.184.17.4699-4708.2002 / J. Bacteriol. / Salmonella type III secretion-associated protein InvE controls translocation of effector proteins into host cells by Kubori (2002)
10.1073/pnas.071065798 / Proc. Natl Acad. Sci. USA / Polymerization of a single protein of the pathogen Yersinia enterocolitica into needles punctures eukaryotic cells by Hoiczyk (2001)
10.1046/j.1365-2958.2000.01851.x / Mol. Microbiol. / Ralstonia solanacearum produces hrp-dependent pili that are required for PopA secretion but not for attachment of bacteria to plant cells by Van Gijsegem (2000)
10.1093/emboj/17.8.2166 / EMBO J. / A novel EspA-associated surface organelle of enteropathogenic Escherichia coli involved in protein translocation into epithelial cells by Knutton (1998)
10.1046/j.1462-5822.2001.00168.x / Cell. Microbiol. / The filamentous type III secretion translocon of enteropathogenic Escherichia coli by Daniell (2001)
10.1128/JB.187.8.2881-2889.2005 / J. Bacteriol. / Polarity of enteropathogenic Escherichia coli EspA filament assembly and protein secretion by Crepin (2005)
10.1080/07853890510037329 / Ann. Med. / The bacterial injection kit: type III secretion systems by Mota (2005)
10.1038/nrmicro1526 / Nat. Rev., Microbiol. / The type III secretion injectisome by Cornelis (2006)
10.1128/jb.173.5.1677-1685.1991 / J. Bacteriol. / Secretion of hybrid proteins by the Yersinia Yop export system by Michiels (1991)
10.1038/nature05272 / Nature / Protein delivery into eukaryotic cells by type III secretion machines by Galan (2006)
10.1126/science.1091422 / Science / The needle length of bacterial injectisomes is determined by a molecular ruler by Journet (2003)
10.1126/science.1118476 / Science / The V-antigen of Yersinia forms a distinct structure at the tip of injectisome needles by Mueller (2005)
10.1086/430932 / J. Infect. Dis. / Protective anti-V antibodies inhibit Pseudomonas and Yersinia translocon assembly within host membranes by Goure (2005)
10.1126/science.1058366 / Science / Length of the flagellar hook and the capacity of the type III export apparatus by Makishima (2001)
10.1038/nature04822 / Nature / Assembly of the inner rod determines needle length in the type III secretion injectisome by Marlovits (2006)
10.1038/sj.emboj.7601731 / EMBO J. / YscU recognizes translocators as export substrates of the Yersinia injectisome by Sorg (2007)
10.1111/j.1365-2958.2005.04534.x / Mol. Microbiol. / Characterization of a Type III secretion substrate specificity switch (T3S4) domain in YscP from Yersinia enterocolitica by Agrain (2005)
10.1111/j.1365-2958.2005.04758.x / Mol. Microbiol. / Secretion of YscP from Yersinia enterocolitica is essential to control the length of the injectisome needle but not to change the type III secretion substrate specificity by Agrain (2005)
10.1128/jb.176.15.4534-4542.1994 / J. Bacteriol. / YscU, a Yersinia enterocolitica inner membrane protein involved in Yop secretion by Allaoui (1994)
10.1128/JB.182.17.4906-4914.2000 / J. Bacteriol. / Domain structure of Salmonella FlhB, a flagellar export component responsible for substrate specificity switching by Minamino (2000)
10.1128/JB.184.16.4500-4509.2002 / J. Bacteriol. / Proteolytic cleavage of the FlhB homologue YscU of Yersinia pseudotuberculosis is essential for bacterial survival but not for type III secretion by Lavander (2002)
10.1038/nature06832 / Nature / Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS by Zarivach (2008)
10.1111/j.1365-2958.2008.06293.x / Mol. Microbiol. / Crystal structure of Spa40, the specificity switch for the Shigella flexneri type III secretion system by Deane (2008)
10.1021/ja00796a058 / J. Am. Chem. Soc. / Geometrical reaction coordinates. II. Nucleophilic addition to a carbonyl group by Bürgi (1973)
10.1016/S0040-4020(01)90678-7 / Tetrahedron / Stereochemistry of reaction paths at carbonyl centres by Bürgi (1974)
10.1074/jbc.M509438200 / J. Biol. Chem. / FlhB regulates ordered export of flagellar components via autocleavage mechanism by Ferris (2005)
10.1074/jbc.M306197200 / J. Biol. Chem. / Crystal structure of a mini-intein reveals a conserved catalytic module involved in side chain cyclization of asparagine during protein splicing by Ding (2003)
10.1093/protein/10.10.1131 / Protein Eng. / Beta-hairpins in proteins revisited: lessons for de novo design by Gunasekaran (1997)
10.1128/JB.00328-08 / J. Bacteriol. / YscP and YscU switch the substrate specificity of the Yersinia type III secretion system by regulating export of the inner rod protein YscI by Wood (2008)
10.1111/j.1365-2958.2008.06247.x / Mol. Microbiol. / YscU cleavage and the assembly of Yersinia type III secretion machine complexes by Riordan (2008)
10.1046/j.1365-2958.2003.03487.x / Mol. Microbiol. / Substrate specificity of type III flagellar protein export in Salmonella is controlled by subdomain interactions in FlhB by Fraser (2003)
10.1016/0882-4010(87)90078-7 / Microb. Pathog. / Transcription of the yop regulon from Y. enterocolitica requires trans acting pYV and chromosomal genes by Cornelis (1987)
10.1007/s002530100690 / Appl. Microbiol. Biotechnol. / Production of selenomethionine-labelled proteins using simplified culture conditions and generally applicable host/vector systems by Guerrero (2001)
10.1016/S0076-6879(97)76066-X / Methods Enzymol. / Processing of X-ray diffraction data collected in oscillation mode by Otwinowski (1997)
10.1107/S0907444905039107 / Acta Crystallogr., D Biol. Crystallogr. / The integration of macromolecular diffraction data by Leslie (2006)
10.1107/S0907444905001307 / Acta Crystallogr. D / Auto-Rickshaw: an automated crystal structure determination platform as an efficient tool for the validation of an X-ray diffraction experiment by Panjikar (2005)
10.1107/S0907444904019158 / Acta Crystallogr. D / Coot: model-building tools for molecular graphics by Emsley (2004)
10.1107/S0907444996012255 / Acta Crystallogr. D / Refinement of macromolecular structures by the maximum-likelihood method by Murshudov (1997)
10.1107/S0907444905036693 / Acta Crystallogr. D / Scaling and assessment of data quality by Evans (2006)
10.1107/S0907444905001617 / Acta Crystallogr. D / Likelihood-enhanced fast translation functions by McCoy (2005)
10.1093/nar/gkm216 / Nucleic Acids Res. / MolProbity: all-atom contacts and structure validation for proteins and nucleic acids by Davis (2007)
10.1007/BF02192850 / J. Biomol. NMR / Processing of multidimensional Nmr data with the new software Prosa by Guntert (1992)
Keller, R. (2004). Optimizing the process of NMR spectrum analysis and computer aided resonance assignment. ETH, Zürich.

Dates

Type	When
Created	16 years, 10 months ago (Oct. 20, 2008, 4:34 a.m.)
Deposited	6 years, 8 months ago (Dec. 24, 2018, 7:26 p.m.)
Indexed	1 year, 1 month ago (June 28, 2024, 6:31 a.m.)
Issued	16 years, 7 months ago (Jan. 1, 2009)
Published	16 years, 7 months ago (Jan. 1, 2009)
Published Print	16 years, 7 months ago (Jan. 1, 2009)

Funders 0

None

BibTeX

@article{Wiesand_2009, title={Structure of the Type III Secretion Recognition Protein YscU from Yersinia enterocolitica}, volume={385}, ISSN={0022-2836}, url={http://dx.doi.org/10.1016/j.jmb.2008.10.034}, DOI={10.1016/j.jmb.2008.10.034}, number={3}, journal={Journal of Molecular Biology}, publisher={Elsevier BV}, author={Wiesand, Ulrich and Sorg, Isabel and Amstutz, Marlise and Wagner, Stefanie and van den Heuvel, Joop and Lührs, Thorsten and Cornelis, Guy R. and Heinz, Dirk W.}, year={2009}, month=jan, pages={854–866} }

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      "author": "Macnab",
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      "journal-title": "Annu. Rev. Microbiol."
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      "article-title": "The tripartite type III secreton of Shigella flexneri inserts IpaB and IpaC into host membranes",
      "volume": "147",
      "author": "Blocker",
      "year": "1999",
      "journal-title": "J. Cell Biol."
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    {
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      "first-page": "652",
      "DOI": "10.1046/j.1365-2958.2001.02200.x",
      "article-title": "Structure and composition of the Shigella flexneri \u201cneedle complex\u201d, a part of its type III secreton",
      "volume": "39",
      "author": "Blocker",
      "year": "2001",
      "journal-title": "Mol. Microbiol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib4",
      "doi-asserted-by": "crossref",
      "first-page": "1040",
      "DOI": "10.1126/science.1102610",
      "article-title": "Structural insights into the assembly of the type III secretion needle complex",
      "volume": "306",
      "author": "Marlovits",
      "year": "2004",
      "journal-title": "Science"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib5",
      "doi-asserted-by": "crossref",
      "first-page": "599",
      "DOI": "10.1074/jbc.M509644200",
      "article-title": "Shigella Spa33 is an essential C-ring component of type III secretion machinery",
      "volume": "281",
      "author": "Morita-Ishihara",
      "year": "2006",
      "journal-title": "J. Biol. Chem."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib6",
      "doi-asserted-by": "crossref",
      "first-page": "602",
      "DOI": "10.1126/science.280.5363.602",
      "article-title": "Supramolecular structure of the Salmonella typhimurium type III protein secretion system",
      "volume": "280",
      "author": "Kubori",
      "year": "1998",
      "journal-title": "Science"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib7",
      "doi-asserted-by": "crossref",
      "first-page": "4699",
      "DOI": "10.1128/JB.184.17.4699-4708.2002",
      "article-title": "Salmonella type III secretion-associated protein InvE controls translocation of effector proteins into host cells",
      "volume": "184",
      "author": "Kubori",
      "year": "2002",
      "journal-title": "J. Bacteriol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib8",
      "doi-asserted-by": "crossref",
      "first-page": "4669",
      "DOI": "10.1073/pnas.071065798",
      "article-title": "Polymerization of a single protein of the pathogen Yersinia enterocolitica into needles punctures eukaryotic cells",
      "volume": "98",
      "author": "Hoiczyk",
      "year": "2001",
      "journal-title": "Proc. Natl Acad. Sci. USA"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib9",
      "doi-asserted-by": "crossref",
      "first-page": "249",
      "DOI": "10.1046/j.1365-2958.2000.01851.x",
      "article-title": "Ralstonia solanacearum produces hrp-dependent pili that are required for PopA secretion but not for attachment of bacteria to plant cells",
      "volume": "36",
      "author": "Van Gijsegem",
      "year": "2000",
      "journal-title": "Mol. Microbiol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib10",
      "doi-asserted-by": "crossref",
      "first-page": "2166",
      "DOI": "10.1093/emboj/17.8.2166",
      "article-title": "A novel EspA-associated surface organelle of enteropathogenic Escherichia coli involved in protein translocation into epithelial cells",
      "volume": "17",
      "author": "Knutton",
      "year": "1998",
      "journal-title": "EMBO J."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib11",
      "doi-asserted-by": "crossref",
      "first-page": "865",
      "DOI": "10.1046/j.1462-5822.2001.00168.x",
      "article-title": "The filamentous type III secretion translocon of enteropathogenic Escherichia coli",
      "volume": "3",
      "author": "Daniell",
      "year": "2001",
      "journal-title": "Cell. Microbiol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib12",
      "doi-asserted-by": "crossref",
      "first-page": "2881",
      "DOI": "10.1128/JB.187.8.2881-2889.2005",
      "article-title": "Polarity of enteropathogenic Escherichia coli EspA filament assembly and protein secretion",
      "volume": "187",
      "author": "Crepin",
      "year": "2005",
      "journal-title": "J. Bacteriol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib13",
      "doi-asserted-by": "crossref",
      "first-page": "234",
      "DOI": "10.1080/07853890510037329",
      "article-title": "The bacterial injection kit: type III secretion systems",
      "volume": "37",
      "author": "Mota",
      "year": "2005",
      "journal-title": "Ann. Med."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib14",
      "doi-asserted-by": "crossref",
      "first-page": "811",
      "DOI": "10.1038/nrmicro1526",
      "article-title": "The type III secretion injectisome",
      "volume": "4",
      "author": "Cornelis",
      "year": "2006",
      "journal-title": "Nat. Rev., Microbiol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib15",
      "doi-asserted-by": "crossref",
      "first-page": "1677",
      "DOI": "10.1128/jb.173.5.1677-1685.1991",
      "article-title": "Secretion of hybrid proteins by the Yersinia Yop export system",
      "volume": "173",
      "author": "Michiels",
      "year": "1991",
      "journal-title": "J. Bacteriol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib16",
      "doi-asserted-by": "crossref",
      "first-page": "567",
      "DOI": "10.1038/nature05272",
      "article-title": "Protein delivery into eukaryotic cells by type III secretion machines",
      "volume": "444",
      "author": "Galan",
      "year": "2006",
      "journal-title": "Nature"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib17",
      "doi-asserted-by": "crossref",
      "first-page": "1757",
      "DOI": "10.1126/science.1091422",
      "article-title": "The needle length of bacterial injectisomes is determined by a molecular ruler",
      "volume": "302",
      "author": "Journet",
      "year": "2003",
      "journal-title": "Science"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib18",
      "doi-asserted-by": "crossref",
      "first-page": "674",
      "DOI": "10.1126/science.1118476",
      "article-title": "The V-antigen of Yersinia forms a distinct structure at the tip of injectisome needles",
      "volume": "310",
      "author": "Mueller",
      "year": "2005",
      "journal-title": "Science"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib19",
      "doi-asserted-by": "crossref",
      "first-page": "218",
      "DOI": "10.1086/430932",
      "article-title": "Protective anti-V antibodies inhibit Pseudomonas and Yersinia translocon assembly within host membranes",
      "volume": "192",
      "author": "Goure",
      "year": "2005",
      "journal-title": "J. Infect. Dis."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib20",
      "doi-asserted-by": "crossref",
      "first-page": "2411",
      "DOI": "10.1126/science.1058366",
      "article-title": "Length of the flagellar hook and the capacity of the type III export apparatus",
      "volume": "291",
      "author": "Makishima",
      "year": "2001",
      "journal-title": "Science"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib21",
      "doi-asserted-by": "crossref",
      "first-page": "637640",
      "DOI": "10.1038/nature04822",
      "article-title": "Assembly of the inner rod determines needle length in the type III secretion injectisome",
      "volume": "441",
      "author": "Marlovits",
      "year": "2006",
      "journal-title": "Nature"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib22",
      "doi-asserted-by": "crossref",
      "first-page": "3015",
      "DOI": "10.1038/sj.emboj.7601731",
      "article-title": "YscU recognizes translocators as export substrates of the Yersinia injectisome",
      "volume": "26",
      "author": "Sorg",
      "year": "2007",
      "journal-title": "EMBO J."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib23",
      "doi-asserted-by": "crossref",
      "first-page": "54",
      "DOI": "10.1111/j.1365-2958.2005.04534.x",
      "article-title": "Characterization of a Type III secretion substrate specificity switch (T3S4) domain in YscP from Yersinia enterocolitica",
      "volume": "56",
      "author": "Agrain",
      "year": "2005",
      "journal-title": "Mol. Microbiol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib24",
      "doi-asserted-by": "crossref",
      "first-page": "1415",
      "DOI": "10.1111/j.1365-2958.2005.04758.x",
      "article-title": "Secretion of YscP from Yersinia enterocolitica is essential to control the length of the injectisome needle but not to change the type III secretion substrate specificity",
      "volume": "57",
      "author": "Agrain",
      "year": "2005",
      "journal-title": "Mol. Microbiol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib25",
      "doi-asserted-by": "crossref",
      "first-page": "4534",
      "DOI": "10.1128/jb.176.15.4534-4542.1994",
      "article-title": "YscU, a Yersinia enterocolitica inner membrane protein involved in Yop secretion",
      "volume": "176",
      "author": "Allaoui",
      "year": "1994",
      "journal-title": "J. Bacteriol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib26",
      "doi-asserted-by": "crossref",
      "first-page": "4906",
      "DOI": "10.1128/JB.182.17.4906-4914.2000",
      "article-title": "Domain structure of Salmonella FlhB, a flagellar export component responsible for substrate specificity switching",
      "volume": "182",
      "author": "Minamino",
      "year": "2000",
      "journal-title": "J. Bacteriol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib27",
      "doi-asserted-by": "crossref",
      "first-page": "4500",
      "DOI": "10.1128/JB.184.16.4500-4509.2002",
      "article-title": "Proteolytic cleavage of the FlhB homologue YscU of Yersinia pseudotuberculosis is essential for bacterial survival but not for type III secretion",
      "volume": "184",
      "author": "Lavander",
      "year": "2002",
      "journal-title": "J. Bacteriol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib28",
      "doi-asserted-by": "crossref",
      "first-page": "124",
      "DOI": "10.1038/nature06832",
      "article-title": "Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS",
      "volume": "453",
      "author": "Zarivach",
      "year": "2008",
      "journal-title": "Nature"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib29",
      "doi-asserted-by": "crossref",
      "first-page": "267",
      "DOI": "10.1111/j.1365-2958.2008.06293.x",
      "article-title": "Crystal structure of Spa40, the specificity switch for the Shigella flexneri type III secretion system",
      "volume": "69",
      "author": "Deane",
      "year": "2008",
      "journal-title": "Mol. Microbiol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib30",
      "doi-asserted-by": "crossref",
      "first-page": "5065",
      "DOI": "10.1021/ja00796a058",
      "article-title": "Geometrical reaction coordinates. II. Nucleophilic addition to a carbonyl group",
      "volume": "95",
      "author": "B\u00fcrgi",
      "year": "1973",
      "journal-title": "J. Am. Chem. Soc."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib31",
      "doi-asserted-by": "crossref",
      "first-page": "1563",
      "DOI": "10.1016/S0040-4020(01)90678-7",
      "article-title": "Stereochemistry of reaction paths at carbonyl centres",
      "volume": "30",
      "author": "B\u00fcrgi",
      "year": "1974",
      "journal-title": "Tetrahedron"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib32",
      "doi-asserted-by": "crossref",
      "first-page": "41236",
      "DOI": "10.1074/jbc.M509438200",
      "article-title": "FlhB regulates ordered export of flagellar components via autocleavage mechanism",
      "volume": "280",
      "author": "Ferris",
      "year": "2005",
      "journal-title": "J. Biol. Chem."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib33",
      "doi-asserted-by": "crossref",
      "first-page": "39133",
      "DOI": "10.1074/jbc.M306197200",
      "article-title": "Crystal structure of a mini-intein reveals a conserved catalytic module involved in side chain cyclization of asparagine during protein splicing",
      "volume": "278",
      "author": "Ding",
      "year": "2003",
      "journal-title": "J. Biol. Chem."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib34",
      "doi-asserted-by": "crossref",
      "first-page": "1131",
      "DOI": "10.1093/protein/10.10.1131",
      "article-title": "Beta-hairpins in proteins revisited: lessons for de novo design",
      "volume": "10",
      "author": "Gunasekaran",
      "year": "1997",
      "journal-title": "Protein Eng."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib35",
      "doi-asserted-by": "crossref",
      "first-page": "4252",
      "DOI": "10.1128/JB.00328-08",
      "article-title": "YscP and YscU switch the substrate specificity of the Yersinia type III secretion system by regulating export of the inner rod protein YscI",
      "volume": "190",
      "author": "Wood",
      "year": "2008",
      "journal-title": "J. Bacteriol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib36",
      "doi-asserted-by": "crossref",
      "first-page": "1485",
      "DOI": "10.1111/j.1365-2958.2008.06247.x",
      "article-title": "YscU cleavage and the assembly of Yersinia type III secretion machine complexes",
      "volume": "68",
      "author": "Riordan",
      "year": "2008",
      "journal-title": "Mol. Microbiol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib37",
      "doi-asserted-by": "crossref",
      "first-page": "1043",
      "DOI": "10.1046/j.1365-2958.2003.03487.x",
      "article-title": "Substrate specificity of type III flagellar protein export in Salmonella is controlled by subdomain interactions in FlhB",
      "volume": "48",
      "author": "Fraser",
      "year": "2003",
      "journal-title": "Mol. Microbiol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib38",
      "doi-asserted-by": "crossref",
      "first-page": "367",
      "DOI": "10.1016/0882-4010(87)90078-7",
      "article-title": "Transcription of the yop regulon from Y. enterocolitica requires trans acting pYV and chromosomal genes",
      "volume": "2",
      "author": "Cornelis",
      "year": "1987",
      "journal-title": "Microb. Pathog."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib39",
      "doi-asserted-by": "crossref",
      "first-page": "718",
      "DOI": "10.1007/s002530100690",
      "article-title": "Production of selenomethionine-labelled proteins using simplified culture conditions and generally applicable host/vector systems",
      "volume": "56",
      "author": "Guerrero",
      "year": "2001",
      "journal-title": "Appl. Microbiol. Biotechnol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib40",
      "doi-asserted-by": "crossref",
      "first-page": "307",
      "DOI": "10.1016/S0076-6879(97)76066-X",
      "article-title": "Processing of X-ray diffraction data collected in oscillation mode",
      "volume": "276",
      "author": "Otwinowski",
      "year": "1997",
      "journal-title": "Methods Enzymol."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib41",
      "doi-asserted-by": "crossref",
      "first-page": "48",
      "DOI": "10.1107/S0907444905039107",
      "article-title": "The integration of macromolecular diffraction data",
      "volume": "62",
      "author": "Leslie",
      "year": "2006",
      "journal-title": "Acta Crystallogr., D Biol. Crystallogr."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib42",
      "doi-asserted-by": "crossref",
      "first-page": "449",
      "DOI": "10.1107/S0907444905001307",
      "article-title": "Auto-Rickshaw: an automated crystal structure determination platform as an efficient tool for the validation of an X-ray diffraction experiment",
      "volume": "61",
      "author": "Panjikar",
      "year": "2005",
      "journal-title": "Acta Crystallogr. D"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib43",
      "doi-asserted-by": "crossref",
      "first-page": "2126",
      "DOI": "10.1107/S0907444904019158",
      "article-title": "Coot: model-building tools for molecular graphics",
      "volume": "60",
      "author": "Emsley",
      "year": "2004",
      "journal-title": "Acta Crystallogr. D"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib44",
      "doi-asserted-by": "crossref",
      "first-page": "240",
      "DOI": "10.1107/S0907444996012255",
      "article-title": "Refinement of macromolecular structures by the maximum-likelihood method",
      "volume": "53",
      "author": "Murshudov",
      "year": "1997",
      "journal-title": "Acta Crystallogr. D"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib45",
      "doi-asserted-by": "crossref",
      "first-page": "72",
      "DOI": "10.1107/S0907444905036693",
      "article-title": "Scaling and assessment of data quality",
      "volume": "62",
      "author": "Evans",
      "year": "2006",
      "journal-title": "Acta Crystallogr. D"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib46",
      "doi-asserted-by": "crossref",
      "first-page": "458",
      "DOI": "10.1107/S0907444905001617",
      "article-title": "Likelihood-enhanced fast translation functions",
      "volume": "61",
      "author": "McCoy",
      "year": "2005",
      "journal-title": "Acta Crystallogr. D"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib47",
      "doi-asserted-by": "crossref",
      "first-page": "W375",
      "DOI": "10.1093/nar/gkm216",
      "article-title": "MolProbity: all-atom contacts and structure validation for proteins and nucleic acids",
      "volume": "35",
      "author": "Davis",
      "year": "2007",
      "journal-title": "Nucleic Acids Res."
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib48",
      "doi-asserted-by": "crossref",
      "first-page": "619",
      "DOI": "10.1007/BF02192850",
      "article-title": "Processing of multidimensional Nmr data with the new software Prosa",
      "volume": "2",
      "author": "Guntert",
      "year": "1992",
      "journal-title": "J. Biomol. NMR"
    },
    {
      "key": "10.1016/j.jmb.2008.10.034_bib49",
      "unstructured": "Keller, R. (2004). Optimizing the process of NMR spectrum analysis and computer aided resonance assignment. ETH, Z\u00fcrich."
    }
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