Crossref journal-article
Elsevier BV
Current Opinion in Genetics & Development (78)
Bibliography

Margueron, R., Trojer, P., & Reinberg, D. (2005). The key to development: interpreting the histone code? Current Opinion in Genetics & Development, 15(2), 163–176.

Authors 3
  1. Raphael Margueron (first)
  2. Patrick Trojer (additional)
  3. Danny Reinberg (additional)
References 103 Referenced 598
  1. 10.1016/S0959-437X(03)00026-1 / Curr Opin Genet Dev / Structure and dynamic behavior of nucleosomes by Luger (2003)
  2. 10.1093/emboj/17.2.520 / EMBO J / Distinct requirements for chromatin assembly in transcriptional repression by thyroid hormone receptor and histone deacetylase by Wong (1998)
  3. 10.1038/10267 / Nat Genet / Architectural regulations and Hmg1 by Wolffe (1999)
  4. 10.1016/j.tig.2004.02.007 / Trends Genet / Phosphorylation of histone H3: a balancing act between chromosome condensation and transcriptional activation by Nowak (2004)
  5. 10.1038/38664 / Nature / Histone acetylation in chromatin structure and transcription by Grunstein (1997)
  6. 10.1128/MMBR.64.2.435-459.2000 / Microbiol Mol Biol Rev / Acetylation of histones and transcription-related factors by Sterner (2000)
  7. 10.1101/gad.927301 / Genes Dev / Transcription regulation by histone methylation: interplay between different covalent modifications of the core histone tails by Zhang (2001)
  8. 10.1021/bi00472a002 / Biochemistry / Level of ubiquitinated histone H2B in chromatin is coupled to ongoing transcription by Davie (1990)
  9. 10.1073/pnas.2436173100 / Proc Natl Acad Sci USA / Histone modifications: now summoning sumoylation by Nathan (2003)
  10. 10.1016/S0021-9258(17)39804-6 / J Biol Chem / ADP-ribosylation of nuclear proteins in vivo. Identification of histone H2B as a major acceptor for mono- and poly(ADP-ribose) in dimethyl sulfate-treated hepatoma AH 7974 cells by Adamietz (1984)
  11. 10.1002/bms.1200220204 / Biol Mass Spectrom / Non-enzymatic glycation of histones by Liebich (1993)
  12. 10.1006/bmme.1995.1059 / Biochem Mol Med / Biotinylation of histones by human serum biotinidase: assessment of biotinyl-transferase activity in sera from normal individuals and children with biotinidase deficiency by Hymes (1995)
  13. 10.1042/0264-6021:3510769 / Biochem J / Histone carbonylation in vivo and in vitro by Wondrak (2000)
  14. 10.1126/sageke.2003.14.re4 / Sci Aging Knowledge Environ / The constantly changing face of chromatin by Vaquero (2003)
  15. 10.1016/j.tig.2003.09.007 / Trends Genet / Histone lysine methylation: a signature for chromatin function by Sims (2003)
  16. 10.1242/jcs.00493 / J Cell Sci / An epigenetic road map for histone lysine methylation by Lachner (2003)
  17. 10.1016/S0955-0674(02)00335-6 / Curr Opin Cell Biol / The many faces of histone lysine methylation by Lachner (2002)
  18. 10.1038/nrm1075 / Nat Rev Mol Cell Biol / Histone acetylation and deacetylation in yeast by Kurdistani (2003)
  19. 10.1074/jbc.273.45.29283 / J Biol Chem / δ-N-methylarginine is a novel posttranslational modification of arginine residues in yeast proteins by Zobel-Thropp (1998)
  20. 10.1126/science.1101400 / Science / Human PAD4 regulates histone arginine methylation levels via demethylimination by Wang (2004)
  21. 10.1016/j.cell.2004.08.020 / Cell / Histone deimination antagonizes arginine methylation by Cuthbert (2004)
  22. 10.1016/S0959-437X(02)00287-3 / Curr Opin Genet Dev / Histone methylation in transcriptional control by Kouzarides (2002)
  23. 10.1126/science.1063127 / Science / Translating the histone code by Jenuwein (2001)
  24. 10.1038/35104721 / Nature / Code of silence by Rice (2001)
  25. 10.1038/nature02017 / Nature / Binary switches and modification cassettes in histone biology and beyond by Fischle (2003)
  26. 10.1038/sj.embor.7400139 / EMBO Rep / Tethering of HP1 proteins to chromatin is relieved by phosphoacetylation of histone H3 by Mateescu (2004)
  27. 10.1074/jbc.C200433200 / J Biol Chem / Ubiquitination of histone H2B by Rad6 is required for efficient Dot1-mediated methylation of histone H3 lysine 79 by Ng (2002)
  28. 10.1038/nature00883 / Nature / Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast by Sun (2002)
  29. 10.1101/gad.940201 / Genes Dev / Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae by Briggs (2001)
  30. 10.1101/gad.1144003 / Genes Dev / Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8 by Henry (2003)
  31. 10.1016/S1097-2765(04)00026-7 / Mol Cell / Proteasomal ATPases link ubiquitylation of histone H2B to methylation of histone H3 by Ezhkova (2004)
  32. 10.1038/nrm1049 / Nat Rev Mol Cell Biol / How the ubiquitin-proteasome system controls transcription by Muratani (2003)
  33. 10.1073/pnas.0305411101 / Proc Natl Acad Sci USA / Physical and functional association of RNA polymerase II and the proteasome by Gillette (2004)
  34. 10.1007/s00412-003-0244-6 / Chromosoma / Identification of novel histone post-translational modifications by peptide mass fingerprinting by Zhang (2003)
  35. 10.1073/pnas.082249499 / Proc Natl Acad Sci USA / Methylation of histone H3 Lys 4 in coding regions of active genes by Bernstein (2002)
  36. 10.1016/S0076-6879(03)76019-4 / Methods Enzymol / Analysis of genome-wide histone acetylation state and enzyme binding using DNA microarrays by Robyr (2004)
  37. 10.1038/nature01080 / Nature / Active genes are tri-methylated at K4 of histone H3 by Santos-Rosa (2002)
  38. 10.1038/ncb1076 / Nat Cell Biol / Histone H3 lysine 4 methylation patterns in higher eukaryotic genes by Schneider (2004)
  39. 10.1073/pnas.0307985101 / Proc Natl Acad Sci USA / Developmental stage differences in chromatin subdomains of the beta-globin locus by Kim (2004)
  40. 10.1016/S1097-2765(03)00479-9 / Mol Cell / Histone methyltransferases direct different degrees of methylation to define distinct chromatin domains by Rice (2003)
  41. 10.1016/S1097-2765(03)00477-5 / Mol Cell / Partitioning and plasticity of repressive histone methylation states in mammalian chromatin by Peters (2003)
  42. 10.1101/gad.300704 / Genes Dev / A silencing pathway to induce H3-K9 and H4-K20 trimethylation at constitutive heterochromatin by Schotta (2004)
  43. 10.1016/S0092-8674(02)01077-2 / Cell / Deciphering the transcriptional histone acetylation code for a human gene by Agalioti (2002)
  44. 10.1101/gad.1021403 / Genes Dev / Phosphorylation of histone H3 during transcriptional activation depends on promoter structure by Labrador (2003)
  45. 10.1016/S0076-6879(03)77007-4 / Methods Enzymol / Histone modification patterns during gene activation by Lo (2004)
  46. 10.1101/gad.1156403 / Genes Dev / Transcriptional regulation by histone ubiquitination and deubiquitination by Zhang (2003)
  47. 10.1038/ncb1151 / Nat Cell Biol / SMYD3 encodes a histone methyltransferase involved in the proliferation of cancer cells by Hamamoto (2004)
  48. 10.1074/jbc.C400151200 / J Biol Chem / Direct binding of INHAT to H3 tails disrupted by modifications by Schneider (2004)
  49. 10.1016/S0092-8674(00)80604-2 / Cell / Stabilization of chromatin structure by PRC1, a Polycomb complex by Shao (1999)
  50. 10.1016/S1097-2765(04)00128-5 / Mol Cell / Polycomb silencing blocks transcription initiation by Dellino (2004)
  51. 10.1016/j.jmb.2004.01.051 / J Mol Biol / Nucleosome binding by the bromodomain and PHD finger of the transcriptional cofactor p300 by Ragvin (2004)
  52. 10.1126/science.288.5470.1422 / Science / Structure and function of a human TAFII250 double bromodomain module by Jacobson (2000)
  53. 10.1016/S0092-8674(00)81821-8 / Cell / The TAF(II)250 subunit of TFIID has histone acetyltransferase activity by Mizzen (1996)
  54. 10.1126/science.289.5488.2357 / Science / Ubiquitin-activating/conjugating activity of TAFII250, a mediator of activation of gene expression in Drosophila by Pham (2000)
  55. 10.1126/science.1095001 / Science / TAF1 activates transcription by phosphorylation of serine 33 in histone H2B by Maile (2004)
  56. 10.1016/j.ceb.2004.03.005 / Curr Opin Cell Biol / Recent advances in X-chromosome inactivation by Heard (2004)
  57. 10.1126/science.1092674 / Science / Reactivation of the paternal X chromosome in early mouse embryos by Mak (2004)
  58. 10.1126/science.1092727 / Science / Epigenetic dynamics of imprinted X inactivation during early mouse development by Okamoto (2004)
  59. 10.1038/nature02222 / Nature / Inheritance of a pre-inactivated paternal X chromosome in early mouse embryos by Huynh (2003)
  60. 10.1242/dev.127.11.2283 / Development / Histone macroH2A1 is concentrated in the inactive X chromosome of female preimplantation mouse embryos by Costanzi (2000)
  61. 10.1126/science.1063443 / Science / Epigenetic reprogramming in mammalian development by Reik (2001)
  62. 10.1371/journal.pbio.0020171 / PLoS Biol / A chromosomal memory triggered by xist regulates histone methylation in x inactivation by Kohlmaier (2004)
  63. 10.1016/S1097-2765(02)00548-8 / Mol Cell / PR-Set7 is a nucleosome-specific methyltransferase that modifies lysine 20 of histone H4 and is associated with silent chromatin by Nishioka (2002)
  64. 10.1242/dev.01116 / Development / Regulation of histone H3 lysine 9 methylation in oocytes and early pre-implantation embryos by Liu (2004)
  65. 10.1016/S0092-8674(00)80061-6 / Cell / Targeted mutagenesis of Tsix leads to nonrandom X inactivation by Lee (1999)
  66. 10.1126/science.1065982 / Science / CTCF, a candidate trans-acting factor for X-inactivation choice by Chao (2002)
  67. {'key': '10.1016/j.gde.2005.01.005_bib67', 'first-page': '635', 'article-title': 'Initiation, establishment and maintenance of Hox gene expression patterns in the mouse', 'volume': '43', 'author': 'Deschamps', 'year': '1999', 'journal-title': 'Int J Dev Biol'} / Int J Dev Biol / Initiation, establishment and maintenance of Hox gene expression patterns in the mouse by Deschamps (1999)
  68. 10.1016/S0925-4773(02)00329-5 / Mech Dev / Hox cluster polarity in early transcriptional availability: a high order regulatory level of clustered Hox genes in the mouse by Roelen (2002)
  69. 10.1101/gad.292104 / Genes Dev / Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription by Chambeyron (2004)
  70. 10.1023/A:1024939130361 / Chromosome Res / A genetic analysis of chromosome territory looping: diverse roles for distal regulatory elements by Ragoczy (2003)
  71. 10.1016/S0092-8674(03)00157-0 / Cell / Polycomb, epigenomes, and control of cell identity by Orlando (2003)
  72. 10.1016/j.ceb.2004.03.010 / Curr Opin Cell Biol / Polycomb complexes and silencing mechanisms by Lund (2004)
  73. 10.1093/nar/gkh523 / Nucleic Acids Res / Histone 3 lysine 4 methylation during the pre-B to immature B-cell transition by Perkins (2004)
  74. 10.1073/pnas.1932643100 / Proc Natl Acad Sci USA / Antigen receptor loci poised for V(D)J rearrangement are broadly associated with BRG1 and flanked by peaks of histone H3 dimethylated at lysine 4 by Morshead (2003)
  75. 10.1038/ni1042 / Nat Immunol / Targeted inhibition of V(D)J recombination by a histone methyltransferase by Osipovich (2004)
  76. 10.1038/ni1099 / Nat Immunol / B cell-specific loss of histone 3 lysine 9 methylation in the V(H) locus depends on Pax5 by Johnson (2004)
  77. 10.1038/ni1046 / Nat Immunol / PRDI-BF1 recruits the histone H3 methyltransferase G9a in transcriptional silencing by Gyory (2004)
  78. 10.1073/pnas.0437846100 / Proc Natl Acad Sci USA / Lysine-79 of histone H3 is hypomethylated at silenced loci in yeast and mammalian cells: a potential mechanism for position-effect variegation by Ng (2003)
  79. 10.1038/ni876 / Nat Immunol / Ezh2 controls B cell development through histone H3 methylation and Igh rearrangement by Su (2003)
  80. 10.1038/ni0703-603 / Nat Immunol / Chromatin dynamics and locus accessibility in the immune system by Mostoslavsky (2003)
  81. 10.1073/pnas.0932635100 / Proc Natl Acad Sci USA / A multistep mechanism for the activation of rearrangement in the immune system by Ji (2003)
  82. 10.1038/ng1351 / Nat Genet / Dynamic assembly of silent chromatin during thymocyte maturation by Su (2004)
  83. {'key': '10.1016/j.gde.2005.01.005_bib83', 'first-page': '7213', 'article-title': 'Dependence of histone modifications and gene expression on DNA hypermethylation in cancer', 'volume': '62', 'author': 'Fahrner', 'year': '2002', 'journal-title': 'Cancer Res'} / Cancer Res / Dependence of histone modifications and gene expression on DNA hypermethylation in cancer by Fahrner (2002)
  84. 10.1038/sj.onc.1206774 / Oncogene / Cancer epigenetics by Momparler (2003)
  85. 10.1016/S1535-6108(02)00234-9 / Cancer Cell / Histone modifications and silencing prior to DNA methylation of a tumor suppressor gene by Bachman (2003)
  86. 10.1016/S1097-2765(02)00741-4 / Mol Cell / MLL targets SET domain methyltransferase activity to Hox gene promoters by Milne (2002)
  87. 10.1073/pnas.1933744100 / Proc Natl Acad Sci USA / EZH2 is a marker of aggressive breast cancer and promotes neoplastic transformation of breast epithelial cells by Kleer (2003)
  88. 10.1038/nature01075 / Nature / The polycomb group protein EZH2 is involved in progression of prostate cancer by Varambally (2002)
  89. 10.1016/S1097-2765(04)00185-6 / Mol Cell / Different EZH2-containing complexes target methylation of histone H1 or nucleosomal histone H3 by Kuzmichev (2004)
  90. Kuzmichev A, Margueron R, Vaquero A, Preisnner T, Scher M, Kirmizis A, Outang X, Brockdorff N, Abate-Shen C, Farnham PJ, Reinberg D: The NAD+-dependent histone deacetylase SirT1 associates with the histone methyltransferases EzH2 in cancer cells. Proc Natl Acad Sci USA 2005, in press.
  91. 10.1016/j.cell.2004.12.012 / Cell / Histone demethylation mediated by the nuclear amine oxidase homolog LSD1 by Shi (2004)
  92. 10.1016/0006-291X(73)91383-1 / Biochem Biophys Res Commun / Enzymatic demethylation of calf thymus histones by Paik (1973)
  93. 10.1038/nature02985 / Nature / Role of histone H2A ubiquitination in polycomb silencing by Wang (2004)
  94. 10.1016/j.devcel.2004.10.005 / Dev Cell / Polycomb group proteins Ring1A/B link ubiquitylation of histone H2A to heritable gene silencing and X inactivation by de Napoles (2004)
  95. 10.1074/jbc.C400493200 / J Biol Chem / Ring1b-mediated H2A ubiquitination associates with inactive X chromosomes and is involved in initiation of X inactivation by Fang (2004)
  96. 10.1016/S1097-2765(01)00405-1 / Mol Cell / Purification and functional characterization of a histone H3-lysine 4-specific methyltransferase by Wang (2001)
  97. 10.1126/science.1060781 / Science / Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor by Wang (2001)
  98. 10.1038/35020506 / Nature / Regulation of chromatin structure by site-specific histone H3 methyltransferases by Rea (2000)
  99. 10.1126/science.1069473 / Science / Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail by Jacobs (2002)
  100. 10.1016/j.molcel.2004.05.009 / Mol Cell / Hierarchical recruitment of polycomb group silencing complexes by Wang (2004)
  101. 10.1126/science.1076997 / Science / Role of histone H3 lysine 27 methylation in Polycomb-group silencing by Cao (2002)
  102. 10.1101/gad.967202 / Genes Dev / Set9, a novel histone H3 methyltransferase that facilitates transcription by precluding histone tail modifications required for heterochromatin formation by Nishioka (2002)
  103. 10.1016/S1097-2765(03)00438-6 / Mol Cell / Methylation of histone H3 K4 mediates association of the Isw1p ATPase with chromatin by Santos-Rosa (2003)
Dates
Type When
Created 20 years, 6 months ago (Feb. 12, 2005, 7:13 a.m.)
Deposited 4 years, 1 month ago (July 4, 2021, 10:16 p.m.)
Indexed 1 day, 8 hours ago (Aug. 20, 2025, 8:51 a.m.)
Issued 20 years, 4 months ago (April 1, 2005)
Published 20 years, 4 months ago (April 1, 2005)
Published Print 20 years, 4 months ago (April 1, 2005)
Funders 0

None

@article{Margueron_2005, title={The key to development: interpreting the histone code?}, volume={15}, ISSN={0959-437X}, url={http://dx.doi.org/10.1016/j.gde.2005.01.005}, DOI={10.1016/j.gde.2005.01.005}, number={2}, journal={Current Opinion in Genetics & Development}, publisher={Elsevier BV}, author={Margueron, Raphael and Trojer, Patrick and Reinberg, Danny}, year={2005}, month=apr, pages={163–176} }