DOI: 10.1016/j.csda.2004.03.017. An extensive comparison of recent classification tools applied to microarray data

An extensive comparison of recent classification tools applied to microarray data

10.1016/j.csda.2004.03.017

Crossref journal-article

Elsevier BV

Computational Statistics & Data Analysis (78)

Bibliography

Lee, J. W., Lee, J. B., Park, M., & Song, S. H. (2005). An extensive comparison of recent classification tools applied to microarray data. Computational Statistics & Data Analysis, 48(4), 869â885.

Authors 4

Jae Won Lee (first)
Jung Bok Lee (additional)
Mira Park (additional)
Seuck Heun Song (additional)

References 34 Referenced 304

10.1038/35000501 / Nature / Distinct types of diffuse large B-cell lyumphoma identified by gene expression profiling by Alizadeh (2000)
10.1073/pnas.96.12.6745 / Proc. Nat. Acad. Sci / Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays by Alon (1999)
10.1073/pnas.102102699 / PNAS / Selection bias in gene extraction on the basis of microarray gene-expression data by Ambroise (2002)
{'key': '10.1016/j.csda.2004.03.017_BIB4', 'first-page': '801', 'article-title': 'Arcing classifiers', 'volume': '26', 'author': 'Breiman', 'year': '1998', 'journal-title': 'Ann. Statist'} / Ann. Statist / Arcing classifiers by Breiman (1998)
10.1023/A:1010933404324 / Mach. Learning / Random forests by Breiman (2001)
{'year': '1984', 'author': 'Breiman', 'series-title': 'Classification and Regression Trees', 'key': '10.1016/j.csda.2004.03.017_BIB6'} / Classification and Regression Trees by Breiman (1984)
10.1038/4462 / Natur. Genetics (Suppl.) / Exploring the new world of the genome with DNA microarrays by Brown (1999)
Chang, C.C., Lin, C.J., 2001. LIBSVM: a library for support vector machines. Available at http://www.csie.ntu.edu.tw/~cjlin/libsvm.
10.1093/bioinformatics/btf867 / Bioinformatics / Boosting for tumor classification with gene expression data by Dettling (2003)
{'year': '2003', 'author': 'Ding', 'series-title': 'Classification Using Generalized Partial Least Squares', 'key': '10.1016/j.csda.2004.03.017_BIB10'} / Classification Using Generalized Partial Least Squares by Ding (2003)
10.1198/016214502753479248 / J. Amer. Statist. Assoc / Comparison of discrimination methods for classification of tumors using gene expression data by Dudoit (2002)
10.1073/pnas.95.25.14863 / PNAS / Clustering analysis and display of genome-wise expression patterns by Eisen (1998)
10.1006/jcss.1997.1504 / J. Comput. System Sci / A decision-theoretic generalization of on-line learning and an application to boosting by Freund (1997)
10.1214/aos/1176347963 / Ann. Statist / Multivariate adaptive regression splines (with discussion) by Friedman (1991)
10.1214/aos/1016218223 / Ann. Statist / Additive logistic regression by Friedman (2000)
10.1093/bioinformatics/16.10.906 / Bioinformatics / Support vector machine classification and validation of cancer tissue samples using microarray expression data by Furey (2000)
10.1073/pnas.241500798 / Proc. Nat. Acad. Sci / Diversity of gene expression in adenocarcinoma of the lung by Garber (2001)
10.1126/science.286.5439.531 / Science / Molecular classification of cancer by Golub (1999)
10.1111/j.2517-6161.1996.tb02073.x / J. Roy. Statist. Soc. Ser. B / Discriminant analysis by Gaussian mixtures by Hastie (1996)
10.2307/2290989 / J. Amer. Statist. Assoc / Flexible discriminant analysis by optimal scoring by Hastie (1994)
10.1214/aos/1176324456 / Ann. Statist / Penalized discriminant analysis by Hastie (1995)
Hosmer, D.W., Lemeshow, S., 1989. Applied Logistic Regression. Wiley Series in Probability and Mathematical Statistics. Wiley, New York, NY.
10.1038/89044 / Natur. Medicine / Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks by Khan (2001)
10.1038/4427 / Natur. Genetics (Suppl.) / Array of hope by Lander (1999)
10.2307/1271308 / Technometrics / Iteratively reweighted partial least squares estimation for generalized linear regression by Marx (1996)
{'year': '1992', 'author': 'McLachlan', 'series-title': 'Discriminant Analysis and Statistical Pattern Recognition', 'key': '10.1016/j.csda.2004.03.017_BIB26'} / Discriminant Analysis and Statistical Pattern Recognition by McLachlan (1992)
10.1023/A:1024068626366 / Mach. Learning / Inference for the generalization error by Nadeau (2003)
10.1038/73432 / Natur. Genetics / Systematic variation in gene expression patterns in human cancer cell lines by Ross (2000)
Scherf, U., Ross, D.T., Waltham, M., Smith, L.H., Lee, J.K., Tanabe, L., Kohn, K.W., Reinhold, W.C., Myers, T.G., Andrews, D.T., Scudiero, D.A., Eisen, M.B., Sausville, E.A., Pommier, Y., Botstein, D., Brown, P.O., Weinstein, J.N., 2000. A gene expression database for the molecular pharmacology of cancer. Nat Genet. 24, 236–244. (10.1038/73439)
10.1073/pnas.082099299 / Proc. Nat. Acad. Sci / Diagnosis of multiple cancer types by shrunken centroids of gene expression by Tibshirani (2002)
Tibshirani, R., Hastie, T., Narasimhan, B., Chu, G., 2003. Class Prediction by Nearest Shrunken Centroids, with Applications to DNA Microarrays. Statistical Science 18, 104–117. (10.1214/ss/1056397488)
10.1093/bioinformatics/17.6.520 / Bioinformatics / Missing value estimation methods for DNA microarrays by Troyanskaya (2001)
{'year': '1998', 'author': 'Vapnik', 'series-title': 'Statistical Learning Theory', 'key': '10.1016/j.csda.2004.03.017_BIB33'} / Statistical Learning Theory by Vapnik (1998)
{'year': '1992', 'author': 'Zuruda', 'series-title': 'Introduction to Artificial Neural Systems', 'key': '10.1016/j.csda.2004.03.017_BIB34'} / Introduction to Artificial Neural Systems by Zuruda (1992)

Dates

Type	When
Created	21 years, 3 months ago (May 8, 2004, 2:52 a.m.)
Deposited	8 months ago (Dec. 16, 2024, 8:20 a.m.)
Indexed	1 day, 13 hours ago (Aug. 21, 2025, 12:44 p.m.)
Issued	20 years, 4 months ago (April 1, 2005)
Published	20 years, 4 months ago (April 1, 2005)
Published Print	20 years, 4 months ago (April 1, 2005)

Funders 0

None

BibTeX

@article{Lee_2005, title={An extensive comparison of recent classification tools applied to microarray data}, volume={48}, ISSN={0167-9473}, url={http://dx.doi.org/10.1016/j.csda.2004.03.017}, DOI={10.1016/j.csda.2004.03.017}, number={4}, journal={Computational Statistics & Data Analysis}, publisher={Elsevier BV}, author={Lee, Jae Won and Lee, Jung Bok and Park, Mira and Song, Seuck Heun}, year={2005}, month=apr, pages={869–885} }

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