Crossref journal-article
Elsevier BV
Cell (78)
Bibliography

Voorhees, R. M., Fernández, I. S., Scheres, S. H. W., & Hegde, R. S. (2014). Structure of the Mammalian Ribosome-Sec61 Complex to 3.4 Å Resolution. Cell, 157(7), 1632–1643.

Authors 4
  1. Rebecca M. Voorhees (first)
  2. Israel S. Fernández (additional)
  3. Sjors H.W. Scheres (additional)
  4. Ramanujan S. Hegde (additional)
References 73 Referenced 322
  1. 10.1083/jcb.56.1.206 / J. Cell Biol. / Ribosome-membrane interaction. Nondestructive disassembly of rat liver rough microsomes into ribosomal and membranous components by Adelman (1973)
  2. 10.1016/j.molcel.2008.10.001 / Mol. Cell / Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome by Agirrezabala (2008)
  3. 10.1083/jcb.150.3.447 / J. Cell Biol. / Visualization of tRNA movements on the Escherichia coli 70S ribosome during the elongation cycle by Agrawal (2000)
  4. 10.7554/eLife.01963 / Elife / Atomic model of the F420-reducing [NiFe] hydrogenase by electron cryo-microscopy using a direct electron detector by Allegretti (2014)
  5. 10.1126/science.1249410 / Science / Structure of the yeast mitochondrial large ribosomal subunit by Amunts (2014)
  6. 10.1038/nature12104 / Nature / Structures of the human and Drosophila 80S ribosome by Anger (2013)
  7. 10.7554/eLife.00461 / Elife / Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles by Bai (2013)
  8. 10.1016/j.sbi.2014.01.002 / Curr. Opin. Struct. Biol. / A new system for naming ribosomal proteins by Ban (2014)
  9. 10.1126/science.1178535 / Science / Structure of monomeric yeast and mammalian Sec61 complexes interacting with the translating ribosome by Becker (2009)
  10. 10.1126/science.278.5346.2123 / Science / Alignment of conduits for the nascent polypeptide chain in the ribosome-Sec61 complex by Beckmann (1997)
  11. 10.1016/S0092-8674(01)00541-4 / Cell / Architecture of the protein-conducting channel associated with the translating 80S ribosome by Beckmann (2001)
  12. 10.1126/science.1212642 / Science / The structure of the eukaryotic ribosome at 3.0 Å resolution by Ben-Shem (2011)
  13. 10.1073/pnas.0808584106 / Proc. Natl. Acad. Sci. USA / A signal-anchor sequence stimulates signal recognition particle binding to ribosomes from inside the exit tunnel by Berndt (2009)
  14. 10.1083/jcb.200412019 / J. Cell Biol. / Disulfide bridge formation between SecY and a translocating polypeptide localizes the translocation pore to the center of SecY by Cannon (2005)
  15. 10.1016/j.molcel.2014.03.023 / Mol. Cell / Fragile x mental retardation protein regulates translation by binding directly to the ribosome by Chen (2014)
  16. 10.1083/jcb.200408188 / J. Cell Biol. / Identification of cytoplasmic residues of Sec61p involved in ribosome binding and cotranslational translocation by Cheng (2005)
  17. 10.1083/jcb.108.2.299 / J. Cell Biol. / Access of proteinase K to partially translocated nascent polypeptides in intact and detergent-solubilized membranes by Connolly (1989)
  18. DeLano, W.L. (2006). The PyMOL Molecular Graphics System. http://www.pymol.org.
  19. 10.1074/jbc.M901855200 / J. Biol. Chem. / The lateral gate of SecYEG opens during protein translocation by du Plessis (2009)
  20. 10.1126/science.1202692 / Science / Structures of the bacterial ribosome in classical and hybrid states of tRNA binding by Dunkle (2011)
  21. 10.1073/pnas.1012556107 / Proc. Natl. Acad. Sci. USA / Lateral opening of a translocon upon entry of protein suggests the mechanism of insertion into membranes by Egea (2010)
  22. 10.1016/j.sbi.2005.03.007 / Curr. Opin. Struct. Biol. / Targeting proteins to membranes: structure of the signal recognition particle by Egea (2005)
  23. 10.1107/S0907444910007493 / Acta Crystallogr. D Biol. Crystallogr. / Features and development of Coot by Emsley (2010)
  24. 10.1126/science.1240585 / Science / Molecular architecture of a eukaryotic translational initiation complex by Fernández (2013)
  25. 10.1016/j.jsb.2006.06.010 / J. Struct. Biol. / Visualizing density maps with UCSF Chimera by Goddard (2007)
  26. 10.1038/nature12950 / Nature / Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion by Gogala (2014)
  27. 10.1016/S0092-8674(00)81098-3 / Cell / Sequence-specific alteration of the ribosome-membrane junction exposes nascent secretory proteins to the cytosol by Hegde (1996)
  28. 10.1016/0022-2836(71)90362-7 / J. Mol. Biol. / Tryptophan transfer RNA as the UGA suppressor by Hirsh (1971)
  29. 10.1016/0022-2836(71)90363-9 / J. Mol. Biol. / Translation of the UGA triplet in vitro by tryptophan transfer RNA’s by Hirsh (1971)
  30. 10.1073/pnas.0809587105 / Proc. Natl. Acad. Sci. USA / Structure of ratcheted ribosomes with tRNAs in hybrid states by Julián (2008)
  31. 10.1016/0092-8674(95)90313-5 / Cell / A posttargeting signal sequence recognition event in the endoplasmic reticulum membrane by Jungnickel (1995)
  32. 10.1038/nmeth.2727 / Nat. Methods / Quantifying the local resolution of cryo-EM density maps by Kucukelbir (2014)
  33. 10.1038/nmeth.2472 / Nat. Methods / Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM by Li (2013)
  34. 10.1016/S0092-8674(00)80311-6 / Cell / Both lumenal and cytosolic gating of the aqueous ER translocon pore are regulated from inside the ribosome during membrane protein integration by Liao (1997)
  35. 10.1038/nature12822 / Nature / Structure of the TRPV1 ion channel determined by electron cryo-microscopy by Liao (2013)
  36. 10.7554/eLife.01483 / Elife / An allosteric Sec61 inhibitor traps nascent transmembrane helices at the lateral gate by Mackinnon (2014)
  37. 10.1074/jbc.270.11.6170 / J. Biol. Chem. / The 70 carboxyl-terminal amino acids of nascent secretory proteins are protected from proteolysis by the ribosome and the protein translocation apparatus of the endoplasmic reticulum membrane by Matlack (1995)
  38. 10.1016/S1097-2765(00)00118-0 / Mol. Cell / The structure of ribosome-channel complexes engaged in protein translocation by Menetret (2000)
  39. 10.1016/j.molcel.2007.10.034 / Mol. Cell / Ribosome binding of a single copy of the SecY complex: implications for protein translocation by Ménétret (2007)
  40. 10.1016/j.str.2008.05.003 / Structure / Single copies of Sec61 and TRAP associate with a nontranslating mammalian ribosome by Ménétret (2008)
  41. 10.1016/S1047-8477(03)00069-8 / J. Struct. Biol. / Accurate determination of local defocus and specimen tilt in electron microscopy by Mindell (2003)
  42. 10.1107/S0907444911001314 / Acta Crystallogr. D Biol. Crystallogr. / REFMAC5 for the refinement of macromolecular crystal structures by Murshudov (2011)
  43. 10.1107/S090744491105606X / Acta Crystallogr. D Biol. Crystallogr. / Low-resolution refinement tools in REFMAC5 by Nicholls (2012)
  44. 10.1126/science.289.5481.920 / Science / The structural basis of ribosome activity in peptide bond synthesis by Nissen (2000)
  45. 10.1016/j.bbamcr.2013.02.021 / Biochim. Biophys. Acta / Co-translational targeting and translocation of proteins to the endoplasmic reticulum by Nyathi (2013)
  46. 10.1083/jcb.1.1.59 / J. Biophys. Biochem. Cytol. / A small particulate component of the cytoplasm by Palade (1955)
  47. 10.1038/nature10014 / Nature / Preserving the membrane barrier for small molecules during bacterial protein translocation by Park (2011)
  48. 10.1146/annurev-biophys-050511-102312 / Annu Rev Biophys / Mechanisms of Sec61/SecY-mediated protein translocation across membranes by Park (2012)
  49. 10.1038/nature12720 / Nature / Structure of the SecY channel during initiation of protein translocation by Park (2014)
  50. 10.1016/S0092-8674(00)81738-9 / Cell / Signal sequence recognition in posttranslational protein transport across the yeast ER membrane by Plath (1998)
  51. 10.1083/jcb.200807066 / J. Cell Biol. / A trans-membrane segment inside the ribosome exit tunnel triggers RAMP4 recruitment to the Sec61p translocase by Pool (2009)
  52. 10.1083/jcb.150.1.53 / J. Cell Biol. / Role of the cytoplasmic segments of Sec61alpha in the ribosome-binding and translocation-promoting activities of the Sec61 complex by Raden (2000)
  53. 10.1016/j.jmb.2003.07.013 / J. Mol. Biol. / Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy by Rosenthal (2003)
  54. 10.1016/S0076-6879(10)82012-9 / Methods Enzymol. / Classification of structural heterogeneity by maximum-likelihood methods by Scheres (2010)
  55. 10.1016/j.jsb.2012.09.006 / J. Struct. Biol. / RELION: implementation of a Bayesian approach to cryo-EM structure determination by Scheres (2012)
  56. 10.1016/j.jmb.2011.11.010 / J. Mol. Biol. / A Bayesian view on cryo-EM structure determination by Scheres (2012)
  57. 10.1038/nmeth.2115 / Nat. Methods / Prevention of overfitting in cryo-EM structure determination by Scheres (2012)
  58. 10.1038/nature08403 / Nature / What recent ribosome structures have revealed about the mechanism of translation by Schmeing (2009)
  59. 10.1126/science.1179700 / Science / The crystal structure of the ribosome bound to EF-Tu and aminoacyl-tRNA by Schmeing (2009)
  60. 10.1038/nsmb.2003 / Nat. Struct. Mol. Biol. / How mutations in tRNA distant from the anticodon affect the fidelity of decoding by Schmeing (2011)
  61. 10.1016/j.jsb.2006.05.009 / J. Struct. Biol. / EMAN2: an extensible image processing suite for electron microscopy by Tang (2007)
  62. 10.1126/science.1235490 / Science / Elongation factor G bound to the ribosome in an intermediate state of translocation by Tourigny (2013)
  63. 10.1083/jcb.201207163 / J. Cell Biol. / A gating motif in the translocation channel sets the hydrophobicity threshold for signal sequence function by Trueman (2012)
  64. 10.1038/nature07421 / Nature / Conformational transition of Sec machinery inferred from bacterial SecYE structures by Tsukazaki (2008)
  65. 10.1038/nature02218 / Nature / X-ray structure of a protein-conducting channel by Van den Berg (2004)
  66. 10.1146/annurev-biochem-113009-092313 / Annu. Rev. Biochem. / Structural basis of the translational elongation cycle by Voorhees (2013)
  67. 10.1038/nsmb.1577 / Nat. Struct. Mol. Biol. / Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome by Voorhees (2009)
  68. 10.1016/S0076-6879(83)96010-X / Methods Enzymol. / Preparation of microsomal membranes for cotranslational protein translocation by Walter (1983)
  69. 10.1074/jbc.273.38.24649 / J. Biol. Chem. / Regulated Co-translational ubiquitination of apolipoprotein B100. A new paradigm for proteasomal degradation of a secretory protein by Zhou (1998)
  70. 10.1038/nature07335 / Nature / Structure of a complex of the ATPase SecA and the protein-translocation channel by Zimmer (2008)
  71. 10.1083/jcb.200210095 / J. Cell Biol. / Substrate-specific function of the translocon-associated protein complex during translocation across the ER membrane by Fons (2003)
  72. 10.1083/jcb.93.1.97 / J. Cell Biol. / Isolation of intracellular membranes by means of sodium carbonate treatment: application to endoplasmic reticulum by Fujiki (1982)
  73. 10.1016/j.molcel.2013.04.015 / Mol. Cell / Listerin-dependent nascent protein ubiquitination relies on ribosome subunit dissociation by Shao (2013)
Dates
Type When
Created 11 years, 2 months ago (June 12, 2014, 11:50 a.m.)
Deposited 6 years, 10 months ago (Oct. 3, 2018, 8:24 a.m.)
Indexed 3 weeks, 6 days ago (July 26, 2025, 5:07 a.m.)
Issued 11 years, 2 months ago (June 1, 2014)
Published 11 years, 2 months ago (June 1, 2014)
Published Print 11 years, 2 months ago (June 1, 2014)
Funders 0

None

@article{Voorhees_2014, title={Structure of the Mammalian Ribosome-Sec61 Complex to 3.4 Å Resolution}, volume={157}, ISSN={0092-8674}, url={http://dx.doi.org/10.1016/j.cell.2014.05.024}, DOI={10.1016/j.cell.2014.05.024}, number={7}, journal={Cell}, publisher={Elsevier BV}, author={Voorhees, Rebecca M. and Fernández, Israel S. and Scheres, Sjors H.W. and Hegde, Ramanujan S.}, year={2014}, month=jun, pages={1632–1643} }