Bibliography
Kato, M., Han, T. W., Xie, S., Shi, K., Du, X., Wu, L. C., Mirzaei, H., Goldsmith, E. J., Longgood, J., Pei, J., Grishin, N. V., Frantz, D. E., Schneider, J. W., Chen, S., Li, L., Sawaya, M. R., Eisenberg, D., Tycko, R., & McKnight, S. L. (2012). Cell-free Formation of RNA Granules: Low Complexity Sequence Domains Form Dynamic Fibers within Hydrogels. Cell, 149(4), 753â767.
Authors
19
- Masato Kato (first)
- Tina W. Han (additional)
- Shanhai Xie (additional)
- Kevin Shi (additional)
- Xinlin Du (additional)
- Leeju C. Wu (additional)
- Hamid Mirzaei (additional)
- Elizabeth J. Goldsmith (additional)
- Jamie Longgood (additional)
- Jimin Pei (additional)
- Nick V. Grishin (additional)
- Douglas E. Frantz (additional)
- Jay W. Schneider (additional)
- She Chen (additional)
- Lin Li (additional)
- Michael R. Sawaya (additional)
- David Eisenberg (additional)
- Robert Tycko (additional)
- Steven L. McKnight (additional)
References
56
Referenced
1,845
10.1016/j.cell.2009.02.044
/ Cell / A systematic survey identifies prions and illuminates sequence features of prionogenic proteins by Alberti (2009)10.1083/jcb.200512082
/ J. Cell Biol. / RNA granules by Anderson (2006)10.1042/bj0292351
/ Biochem. J. / The X-ray interpretation of denaturation and the structure of the seed globulins by Astbury (1935)10.1093/hmg/ddq335
/ Hum. Mol. Genet. / Mutant FUS proteins that cause amyotrophic lateral sclerosis incorporate into stress granules by Bosco (2010)10.1126/science.1172046
/ Science / Germline P granules are liquid droplets that localize by controlled dissolution/condensation by Brangwynne (2009)10.1016/j.molcel.2009.11.020
/ Mol. Cell / Eukaryotic stress granules: the ins and outs of translation by Buchan (2009)10.1242/jcs.078444
/ J. Cell Sci. / Stress-specific composition, assembly and kinetics of stress granules in Saccharomyces cerevisiae by Buchan (2011)10.1523/JNEUROSCI.10-06-01788.1990
/ J. Neurosci. / In situ hybridization histochemistry of Ca2+/calmodulin-dependent protein kinase in developing rat brain by Burgin (1990)10.1083/jcb.200704147
/ J. Cell Biol. / Edc3p and a glutamine/asparagine-rich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae by Decker (2007)10.1038/nature02261
/ Nature / Protein folding and misfolding by Dobson (2003)10.1074/mcp.M500255-MCP200
/ Mol. Cell. Proteomics / Characterization of an RNA granule from developing brain by Elvira (2006)10.1016/j.cell.2007.06.024
/ Cell / A saturated FG-repeat hydrogel can reproduce the permeability properties of nuclear pore complexes by Frey (2007)10.1126/science.1132516
/ Science / FG-rich repeats of nuclear pore proteins form a three-dimensional meshwork with hydrogel-like properties by Frey (2006)10.1126/science.1193697
/ Science / Cytoplasmic partitioning of P granule components is not required to specify the germline in C. elegans by Gallo (2010)10.1038/336674a0
/ Nature / Selective localization of messenger RNA for cytoskeletal protein MAP2 in dendrites by Garner (1988)10.1016/0022-2836(68)90014-4
/ J. Mol. Biol. / “Cross-beta” conformation in proteins by Geddes (1968)10.1091/mbc.e04-08-0715
/ Mol. Biol. Cell / Stress granule assembly is mediated by prion-like aggregation of TIA-1 by Gilks (2004)10.1016/j.cell.2012.04.016
/ Cell / Cell-free Formation of RNA Granules: Bound RNAs Identify Features and Components of Cellular Assemblies by Han (2012)10.1002/prot.10150
/ Proteins / Simple sequences are rare in the Protein Data Bank by Huntley (2002)10.1016/j.neuron.2004.07.022
/ Neuron / Kinesin transports RNA: isolation and characterization of an RNA-transporting granule by Kanai (2004)10.1083/jcb.147.7.1431
/ J. Cell Biol. / RNA-binding proteins TIA-1 and TIAR link the phosphorylation of eIF-2 alpha to the assembly of mammalian stress granules by Kedersha (1999)10.1101/gad.7.6.948
/ Genes Dev. / Initial organization of the Drosophila dorsoventral axis depends on an RNA-binding protein encoded by the squid gene by Kelley (1993)10.1523/JNEUROSCI.16-24-07812.1996
/ J. Neurosci. / Translocation of RNA granules in living neurons by Knowles (1996)10.1242/dev.112.3.679
/ Development / The maternal gene nanos has a central role in posterior pattern formation of the Drosophila embryo by Lehmann (1991)10.1002/jez.1401670211
/ J. Exp. Zool. / Polar granules of Drosophila. II. Ultrastructural changes during early embryogenesis by Mahowald (1968)10.1016/0092-8674(83)90207-6
/ Cell / A protease-resistant protein is a structural component of the scrapie prion by McKinley (1983)10.1016/j.bbapap.2005.10.021
/ Biochim. Biophys. Acta / Probing the pressure-temperature stability of amyloid fibrils provides new insights into their molecular properties by Meersman (2006)10.1073/pnas.97.22.11910
/ Proc. Natl. Acad. Sci. USA / A census of glutamine/asparagine-rich regions: implications for their conserved function and the prediction of novel prions by Michelitsch (2000)10.1006/dbio.1995.8048
/ Dev. Biol. / mRNA localisation during development by Micklem (1995)10.1016/0092-8674(95)90353-4
/ Cell / Binding of pumilio to maternal hunchback mRNA is required for posterior patterning in Drosophila embryos by Murata (1995)10.1016/S0092-8674(05)80093-5
/ Cell / The Drosophila dorsoventral patterning gene gurken produces a dorsally localized RNA and encodes a TGF alpha-like protein by Neuman-Silberberg (1993)10.1146/annurev.cellbio.17.1.569
/ Annu. Rev. Cell Dev. Biol. / Getting the message across: the intracellular localization of mRNAs in higher eukaryotes by Palacios (2001)10.1006/dbio.2000.9607
/ Dev. Biol. / P granules in the germ cells of Caenorhabditis elegans adults are associated with clusters of nuclear pores and contain RNA by Pitt (2000){'key': '10.1016/j.cell.2012.04.017_bib34', 'series-title': 'R: A language and environment for statistical computing', 'year': '2010'}
/ R: A language and environment for statistical computing (2010)10.1242/jcs.024976
/ J. Cell Sci. / A role for Q/N-rich aggregation-prone regions in P-body localization by Reijns (2008)10.1038/nm1066
/ Nat. Med. / Protein aggregation and neurodegenerative disease by Ross (2004)10.1073/pnas.0711507105
/ Proc. Natl. Acad. Sci. USA / Cardiogenic small molecules that enhance myocardial repair by stem cells by Sadek (2008)10.1038/nchembio.95
/ Nat. Chem. Biol. / Small-molecule activation of neuronal cell fate by Schneider (2008)10.1016/S0197-0186(02)00196-1
/ Neurochem. Int. / Neurodegenerative disorders of protein aggregation by Shastry (2003)10.1006/prep.1998.1003
/ Protein Expr. Purif. / Overcoming expression and purification problems of RhoGDI using a family of “parallel” expression vectors by Sheffield (1999)10.1107/S0108767307043930
/ Acta Crystallogr. A / A short history of SHELX by Sheldrick (2008)10.1073/pnas.0604035103
/ Proc. Natl. Acad. Sci. USA / Characterization of the nanoscale properties of individual amyloid fibrils by Smith (2006)10.1073/pnas.79.5.1558
/ Proc. Natl. Acad. Sci. USA / Immunofluorescence visualization of germ-line-specific cytoplasmic granules in embryos, larvae, and adults of Caenorhabditis elegans by Strome (1982)10.1016/S0065-3233(08)60320-4
/ Adv. Protein Chem. / The structure of amyloid fibrils by electron microscopy and X-ray diffraction by Sunde (1997)10.1110/ps.4210102
/ Protein Sci. / Natively unfolded proteins: a point where biology waits for physics by Uversky (2002)10.1242/dev.047654
/ Development / The C. elegans homolog of nucleoporin Nup98 is required for the integrity and function of germline P granules by Voronina (2010)10.1101/cshperspect.a002774
/ Cold Spring Harb. Perspect. Biol. / RNA granules in germ cells by Voronina (2011)10.1016/0092-8674(91)90110-K
/ Cell / Nanos is the localized posterior determinant in Drosophila by Wang (1991)10.1126/science.7909170
/ Science / [URE3] as an altered URE2 protein: evidence for a prion analog in Saccharomyces cerevisiae by Wickner (1994)10.1016/S0006-3495(99)77270-X
/ Biophys. J. / Ultrastructural studies on scrapie prion protein crystals obtained from reverse micellar solutions by Wille (1999)10.1016/S0076-6879(96)66035-2
/ Methods Enzymol. / Analysis of compositionally biased regions in sequence databases by Wootton (1996)- R Development Core Team (2010). R: A language and environment for statistical computing (Vienna, Austria: R Foundation for Statistical Computing).
- Rasband, W.S. (1997-2011). ImageJ (Bethesda, MD: U. S. National Institute of Health).
-
Sheffield, P., Garrard, S., and Derewenda, Z. (1999). Overcoming expression and purification problems of RhoGDI using a family of “parallel” expression vectors. Protein Expr. Purif. 15, 34–39.
(
10.1006/prep.1998.1003
) -
Sheldrick, G.M. (2008). A short history of SHELX. Acta Crystallogr. A 64, 112–122.
(
10.1107/S0108767307043930
) -
Wootton, J.C., and Federhen, S. (1996). Analysis of compositionally biased regions in sequence databases. Methods Enzymol. 266, 554–571.
(
10.1016/S0076-6879(96)66035-2
)
Dates
Type | When |
---|---|
Created | 13 years, 3 months ago (May 10, 2012, 11:46 a.m.) |
Deposited | 3 years, 9 months ago (Oct. 29, 2021, 9:25 p.m.) |
Indexed | 3 hours, 14 minutes ago (Aug. 23, 2025, 9:48 p.m.) |
Issued | 13 years, 3 months ago (May 1, 2012) |
Published | 13 years, 3 months ago (May 1, 2012) |
Published Print | 13 years, 3 months ago (May 1, 2012) |
@article{Kato_2012, title={Cell-free Formation of RNA Granules: Low Complexity Sequence Domains Form Dynamic Fibers within Hydrogels}, volume={149}, ISSN={0092-8674}, url={http://dx.doi.org/10.1016/j.cell.2012.04.017}, DOI={10.1016/j.cell.2012.04.017}, number={4}, journal={Cell}, publisher={Elsevier BV}, author={Kato, Masato and Han, Tina W. and Xie, Shanhai and Shi, Kevin and Du, Xinlin and Wu, Leeju C. and Mirzaei, Hamid and Goldsmith, Elizabeth J. and Longgood, Jamie and Pei, Jimin and Grishin, Nick V. and Frantz, Douglas E. and Schneider, Jay W. and Chen, She and Li, Lin and Sawaya, Michael R. and Eisenberg, David and Tycko, Robert and McKnight, Steven L.}, year={2012}, month=may, pages={753–767} }